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EBI Dbfetch

ID   X95955; SV 1; linear; genomic DNA; STD; PRO; 4286 BP.
XX
AC   X95955;
XX
DT   01-MAR-1996 (Rel. 47, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 15)
XX
DE   B.amyloliquefaciens ribB, ribG, ribA, ribH & ribT genes
XX
KW   deaminase; GTP cyclohydrolase II; lumazine synthase; reductase; ribA gene;
KW   ribB gene; ribG gene; ribH gene; riboflavin biosynthesis operon;
KW   Riboflavin synthase; ribT gene.
XX
OS   Bacillus amyloliquefaciens
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RA   Gusarov I.I., Kreneva R.A., Podchernyaev D.A., Iomantas Y.V.,
RA   Abalakina E.G., Stoinova N.V., Perumov D.A., Kozlov Y.I.;
RT   "Riboflavin biosynthesis genes of Bacillus amyloliquefaciens: primary
RT   structure, arrangement and regulation";
RL   Mol. Biol. 31:446-453(1997).
XX
RN   [2]
RP   1-4286
RA   Gusarov I.;
RT   ;
RL   Submitted (27-FEB-1996) to the EMBL/GenBank/DDBJ databases.
RL   I. Gusarov, GNIIgenetika, 1st Dorozhny pr. 1A, 113545, Moscow, RUSSIA
XX
DR   RFAM; RF00050; FMN.
XX
CC   Overlapping sequence Z27458
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4286
FT                   /organism="Bacillus amyloliquefaciens"
FT                   /strain="A 50"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1390"
FT   promoter        321..348
FT                   /note="riboflavin operon"
FT   CDS             653..1768
FT                   /transl_table=11
FT                   /gene="ribG"
FT                   /product="deaminase"
FT                   /db_xref="GOA:P70814"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR002734"
FT                   /db_xref="InterPro:IPR004794"
FT                   /db_xref="InterPro:IPR011549"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="UniProtKB/Swiss-Prot:P70814"
FT                   /protein_id="CAA65189.1"
FT                   /translation="MEEYYMNTAIELARRGEGQTQPNPLVGAVVVKKRQIVGMGAHLQY
FT                   GEAHAEVHAINMAGSLAKGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNP
FT                   LVAGKGITMLEEAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTLKAAASLDGKTATE
FT                   TGDSKWITSEAARLDAQQYRKSHQRILVGAGTVKADNPSLTCRLPDAVKQPVRVILDTK
FT                   LTVPETANVLTDGAAPTWIFTAAGSDVRKKDRLTALGIKVFTLETDRIHIPEVLSILAE
FT                   NGIMSVYVEGGASVHGSFVKAGCFDELHFYFAPILIGGTLAPSLISGEGFQSMKDVPHL
FT                   QFTQITQIGPDIKLTAIPKDGKDGDDVYRNR"
FT   CDS             1749..2396
FT                   /transl_table=11
FT                   /gene="ribB"
FT                   /product="riboflavin synthase (a-subunit)"
FT                   /db_xref="GOA:Q44680"
FT                   /db_xref="InterPro:IPR001783"
FT                   /db_xref="InterPro:IPR017938"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q44680"
FT                   /protein_id="CAA65190.1"
FT                   /translation="MFTGIVEETGTIQAIKKTGLSMALTIAASKVTSDVRLGDSIAVNG
FT                   ICLTVTGFSDNQFTVDVMPETVKATSLNGLSKGSKVNLERAMSANGRFGGHFVSGHVDG
FT                   TAEITRIEKKSNAVYYDLKLSPELTKTLVLKGSITVDGVSSTIFGLSDESVTVSVIPHT
FT                   ISETIFRTKAVGSIVNIECDMIGKYLYRFLHKTEQTKSNQTITEAFFSENGF"
FT   CDS             2411..3607
FT                   /transl_table=11
FT                   /gene="ribA"
FT                   /product="GTP cyclohydrolase II"
FT                   /product="3,4-dihydroxy-2-butanone 4-phosphate synthase"
FT                   /db_xref="GOA:P51695"
FT                   /db_xref="InterPro:IPR000422"
FT                   /db_xref="InterPro:IPR000926"
FT                   /db_xref="InterPro:IPR016299"
FT                   /db_xref="InterPro:IPR017945"
FT                   /db_xref="UniProtKB/Swiss-Prot:P51695"
FT                   /protein_id="CAA65191.1"
FT                   /translation="MFHPIEEALEALKKGEVIIVVDDEDRENEGDFVALAEHATPEVVN
FT                   FMATHGRGLICTPLSEDIAGRLDLHPMVDHNTDSHETAFTVSIDHKLTKTGISAQERSF
FT                   TIQALLDEESVPGDFQRPGHIFPLIAKKGGVLKRAGHTEAAVDLAKACGSQGADVICEI
FT                   MNEDGTMARVPEISEIAKSHQLKMITIKDLIEYRYNITTLVNREVDITLPTDFGTFRVY
FT                   GYTNEVDGKEHLAFVMGDVPFNSGPVLVRVHSECLTGDVFASHRCDCGPQLHAALRQIA
FT                   EEGRGVLLYLRQEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILR
FT                   DLGVQHMKLLTNNPRKIAGLEGYGLSISDRVPLQMEASEHNKQYLQTKMKKLGHLLHF"
FT   CDS             3639..4103
FT                   /transl_table=11
FT                   /gene="ribH"
FT                   /product="lumazine synthase (b-subunit)"
FT                   /db_xref="GOA:Q44681"
FT                   /db_xref="InterPro:IPR002180"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q44681"
FT                   /protein_id="CAA65192.1"
FT                   /translation="MNIIQGNLVGTGLKIGIVVGRFNEFITSKLLSGAEDTLIRHGVES
FT                   NDIDVAWVPGAFEIPFAAKKMAETKKYDAVITLGTVIRGATTHYDYVCNEAAKGIAQAG
FT                   TATGVPVIFGIVTTETIEQAIERAGTKAGNKGADCAVSAIEMANLNRSFE"
FT   CDS             4217..>4286
FT                   /transl_table=11
FT                   /gene="ribT"
FT                   /product="reductase"
FT                   /db_xref="UniProtKB/TrEMBL:Q44682"
FT                   /protein_id="CAA65193.1"
FT                   /translation="MLIRYKKSFEKIAMGLLSFMPNE"
XX
SQ   Sequence 4286 BP; 1306 A; 926 C; 1102 G; 952 T; 0 other;
     aagacgagcc tactgcgatc ggacaaaccc tgtctcagga aaaagaagaa tatacagtga        60
     aaacatataa aattacgaaa atagaaggaa atgaatacca cggtacggca gcaaacggca       120
     caaaaatcat ttttaacggc gacaagctga aacaggatct ctccgatgtg aaaaaaggag       180
     ataagattaa agcgtatttc agcaaatcga accggattga cggcttattg aaggtcgtta       240
     aagtaaacga ataaatgaag gcgccctttt tggtaaaaaa aggccttttt attttttctg       300
     aataattagg tgcaaattca ttgcgcctcc cgtaaaggat gttataatag cggataagga       360
     caaaaaaata ttgattgtat ccttcggggc tgggtgaaaa tcccgaccgg cggtaataag       420
     gcgctcctgc gctttacagc ccgtgacccg tatgcatctg tatacggtgg attcagtgaa       480
     aagctgaagc cgacagtgaa agtctggatg ggagaaggat gagagaagct atgcaaaaaa       540
     taatcatact gtatagtctt atttcctatg gattaaaact ggtaaagccc cgaatgtgta       600
     aacattcggg gctttttgac gccaaattgc gtggaagaag ggagggataa cgatggaaga       660
     atattatatg aatacggcaa tagagcttgc cagacgcggt gaaggacaga cacagccgaa       720
     tcctcttgtc ggcgccgtcg tcgtcaaaaa acgacagatc gtcggaatgg gcgcccactt       780
     gcaatacgga gaggcccatg ctgaggtgca cgcgatcaat atggcaggca gcctagcaaa       840
     aggcgctgat ttgtatgtga cgcttgagcc ttgcagccat tacggaaaaa caccgccatg       900
     tgccgaactg atcatgaaat cagggataaa aagggtgttt atcgctgtgg aagatcccaa       960
     tccgcttgta gccggaaaag gcatcacaat gctggaagaa gcgggcatcg aagtgaaaac      1020
     ggggcttctc aggcaacagg cagaagagct gaataaaatg tttcttcact tcatgcggac      1080
     cggacttccg tatgtcacct tgaaagcggc cgcaagcctt gacgggaaaa cagcgactga      1140
     aaccggtgac agcaaatgga ttacatcaga ggcggcaagg cttgatgccc agcaatacag      1200
     gaaatcgcat caaaggattc ttgtcggagc aggcacagtc aaagccgata atccgagcct      1260
     gacatgcagg ctccccgatg cggtgaagca gccggtcaga gtcattctcg atacaaagct      1320
     gaccgttcct gaaacggcaa atgtgctcac tgacggggct gcgccgacat ggatatttac      1380
     agccgcaggt tctgacgtcc gaaagaaaga ccggctgacc gcactcggaa taaaagtctt      1440
     tacgcttgaa acagaccgca ttcacatccc tgaggtgctc agcattctcg ctgaaaacgg      1500
     cataatgtcc gtttatgtgg aaggaggagc atctgtacac ggaagttttg tcaaggcggg      1560
     ctgtttcgac gagcttcatt tctatttcgc ccctatatta atcggaggaa cgcttgctcc      1620
     cagcttgatc tccggtgaag gttttcaatc aatgaaagat gtcccccatt tacaattcac      1680
     acaaattacc caaatcgggc cggatataaa actgacggcc atacctaaag atggaaagga      1740
     tggtgacgat gtttacagga atcgttgaag aaacaggcac gatccaagca atcaaaaaga      1800
     caggcctttc catggcatta acaattgccg cttcaaaagt gacaagtgat gtgaggcttg      1860
     gcgacagcat cgcggtaaac ggcatctgcc tgaccgtgac cggattttct gacaatcaat      1920
     ttacggtaga tgtcatgccg gagacagtta aagccacttc gctgaacggc ttgtcaaaag      1980
     gcagtaaagt gaatctggaa agagcaatgt ccgccaacgg acggttcggc ggccactttg      2040
     tatcagggca cgtagacggg acggcggaaa ttacacggat cgagaaaaaa agcaacgcgg      2100
     tctattacga cttaaagctg tctcccgaat tgacgaaaac gctcgtattg aaaggttcga      2160
     ttacggtaga cggcgtgagc tcgacgattt tcggcttatc agacgaaagt gtgacggtat      2220
     ctgtcattcc gcataccatc tcagaaacga ttttccggac gaaagcagtc ggctcgatcg      2280
     tcaatattga gtgcgacatg atcggcaaat acttataccg ctttttgcac aaaacagaac      2340
     aaacgaaaag caatcaaact atcacagaag ccttttttag cgagaacggc ttttagaaag      2400
     ggagatcaat atgtttcatc cgatagaaga ggcattagaa gcgctgaaaa aaggtgaagt      2460
     catcatcgtt gtcgatgatg aagacagaga aaacgaagga gatttcgtag cgctcgctga      2520
     gcatgctacg cctgaagtgg tgaattttat ggcgacccac gggagaggcc tgatctgcac      2580
     gccgctttct gaagacatcg ccggccggct ggatcttcat ccaatggtcg atcataatac      2640
     agactcgcat gagaccgcgt ttacagtcag cattgaccac aagctgacaa aaacgggaat      2700
     cagcgctcag gaacgttcct ttacgattca ggcgcttttg gacgaagaat ctgtgcctgg      2760
     cgattttcag cgtccgggtc atatttttcc cttaatagca aaaaaaggag gcgtcctgaa      2820
     gcgggcgggc cacacggaag cagccgttga cctggcaaaa gcatgcggtt ctcaaggagc      2880
     ggacgtcatt tgtgaaatta tgaatgaaga cggcacaatg gcgagagtgc ctgagattag      2940
     cgagattgcg aaaagccacc agctgaaaat gattacgata aaagacttaa tagaataccg      3000
     ctacaacatt acaacacttg tgaacagaga agttgacatt acgctgccga ctgacttcgg      3060
     cacgttccgg gtttacggat atacaaacga ggtggacgga aaagaacatc tcgcctttgt      3120
     catgggcgat gtcccgttta acagcggacc cgttcttgtc agagtgcact cagaatgcct      3180
     gaccggcgat gtgtttgcat cccaccgctg tgattgcggg cctcagcttc atgccgcgtt      3240
     gcgccaaatt gccgaagaag gccgcggcgt tctattgtat ttgcgtcagg aaggcagagg      3300
     aatcggtctc atcaataagc tgaaagcgta tcgattgcag gaacaagggt acgacacggt      3360
     tgaagcgaac gaagcgctcg gctttctgcc tgacttgcgc aactatggca tcggcgccca      3420
     gattctccgc gatttagggg ttcagcatat gaaactttta accaataacc cccggaaaat      3480
     cgccggcctt gaagggtacg gactaagcat ttcagatcgg gtgccgcttc aaatggaagc      3540
     gagtgagcac aacaagcagt atttacaaac caaaatgaaa aaactcggac acttgcttca      3600
     tttctaaaaa caaatctcac aaaaaaggat ggataaatat gaatatcata caaggaaacc      3660
     tagtaggaac aggacttaaa atcggaatcg tcgtcggcag atttaatgaa tttattacga      3720
     gcaagctgtt aagcggagca gaagacacat tgattcgcca cggtgtagaa tcaaatgaca      3780
     ttgatgtcgc ttgggtgccg ggagcgtttg aaatcccgtt tgccgcaaaa aaaatggcgg      3840
     aaacgaaaaa atacgatgcc gtcattacac ttggcacggt gatcagagga gcgacaacgc      3900
     attatgacta tgtctgcaac gaagcggcaa aaggcatcgc tcaggcggga acggcgacgg      3960
     gcgtcccggt tatcttcggc atcgtgacga ctgaaaccat tgagcaggct atcgaacgcg      4020
     ccggaacaaa agccggaaat aagggagcgg actgcgcagt atccgccatt gaaatggcaa      4080
     atttaaaccg ctcatttgaa taatttgttg aaaagcgttt aaaaccgcgg cgaaaatgat      4140
     ataatgtgag aaaacggatc gcctttatgt atccgtttgt atggtgaatg gacattttgg      4200
     atatagaggg gtttttatgt taattcgtta taaaaaatcg tttgaaaaga ttgcgatggg      4260
     tcttctgtca tttatgccga atgaaa                                           4286
//


  
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