![]() |
EBI DbfetchID X95955; SV 1; linear; genomic DNA; STD; PRO; 4286 BP. XX AC X95955; XX DT 01-MAR-1996 (Rel. 47, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 15) XX DE B.amyloliquefaciens ribB, ribG, ribA, ribH & ribT genes XX KW deaminase; GTP cyclohydrolase II; lumazine synthase; reductase; ribA gene; KW ribB gene; ribG gene; ribH gene; riboflavin biosynthesis operon; KW Riboflavin synthase; ribT gene. XX OS Bacillus amyloliquefaciens OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RA Gusarov I.I., Kreneva R.A., Podchernyaev D.A., Iomantas Y.V., RA Abalakina E.G., Stoinova N.V., Perumov D.A., Kozlov Y.I.; RT "Riboflavin biosynthesis genes of Bacillus amyloliquefaciens: primary RT structure, arrangement and regulation"; RL Mol. Biol. 31:446-453(1997). XX RN [2] RP 1-4286 RA Gusarov I.; RT ; RL Submitted (27-FEB-1996) to the EMBL/GenBank/DDBJ databases. RL I. Gusarov, GNIIgenetika, 1st Dorozhny pr. 1A, 113545, Moscow, RUSSIA XX DR RFAM; RF00050; FMN. XX CC Overlapping sequence Z27458 XX FH Key Location/Qualifiers FH FT source 1..4286 FT /organism="Bacillus amyloliquefaciens" FT /strain="A 50" FT /mol_type="genomic DNA" FT /db_xref="taxon:1390" FT promoter 321..348 FT /note="riboflavin operon" FT CDS 653..1768 FT /transl_table=11 FT /gene="ribG" FT /product="deaminase" FT /db_xref="GOA:P70814" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR002734" FT /db_xref="InterPro:IPR004794" FT /db_xref="InterPro:IPR011549" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/Swiss-Prot:P70814" FT /protein_id="CAA65189.1" FT /translation="MEEYYMNTAIELARRGEGQTQPNPLVGAVVVKKRQIVGMGAHLQY FT GEAHAEVHAINMAGSLAKGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNP FT LVAGKGITMLEEAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTLKAAASLDGKTATE FT TGDSKWITSEAARLDAQQYRKSHQRILVGAGTVKADNPSLTCRLPDAVKQPVRVILDTK FT LTVPETANVLTDGAAPTWIFTAAGSDVRKKDRLTALGIKVFTLETDRIHIPEVLSILAE FT NGIMSVYVEGGASVHGSFVKAGCFDELHFYFAPILIGGTLAPSLISGEGFQSMKDVPHL FT QFTQITQIGPDIKLTAIPKDGKDGDDVYRNR" FT CDS 1749..2396 FT /transl_table=11 FT /gene="ribB" FT /product="riboflavin synthase (a-subunit)" FT /db_xref="GOA:Q44680" FT /db_xref="InterPro:IPR001783" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/Swiss-Prot:Q44680" FT /protein_id="CAA65190.1" FT /translation="MFTGIVEETGTIQAIKKTGLSMALTIAASKVTSDVRLGDSIAVNG FT ICLTVTGFSDNQFTVDVMPETVKATSLNGLSKGSKVNLERAMSANGRFGGHFVSGHVDG FT TAEITRIEKKSNAVYYDLKLSPELTKTLVLKGSITVDGVSSTIFGLSDESVTVSVIPHT FT ISETIFRTKAVGSIVNIECDMIGKYLYRFLHKTEQTKSNQTITEAFFSENGF" FT CDS 2411..3607 FT /transl_table=11 FT /gene="ribA" FT /product="GTP cyclohydrolase II" FT /product="3,4-dihydroxy-2-butanone 4-phosphate synthase" FT /db_xref="GOA:P51695" FT /db_xref="InterPro:IPR000422" FT /db_xref="InterPro:IPR000926" FT /db_xref="InterPro:IPR016299" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/Swiss-Prot:P51695" FT /protein_id="CAA65191.1" FT /translation="MFHPIEEALEALKKGEVIIVVDDEDRENEGDFVALAEHATPEVVN FT FMATHGRGLICTPLSEDIAGRLDLHPMVDHNTDSHETAFTVSIDHKLTKTGISAQERSF FT TIQALLDEESVPGDFQRPGHIFPLIAKKGGVLKRAGHTEAAVDLAKACGSQGADVICEI FT MNEDGTMARVPEISEIAKSHQLKMITIKDLIEYRYNITTLVNREVDITLPTDFGTFRVY FT GYTNEVDGKEHLAFVMGDVPFNSGPVLVRVHSECLTGDVFASHRCDCGPQLHAALRQIA FT EEGRGVLLYLRQEGRGIGLINKLKAYRLQEQGYDTVEANEALGFLPDLRNYGIGAQILR FT DLGVQHMKLLTNNPRKIAGLEGYGLSISDRVPLQMEASEHNKQYLQTKMKKLGHLLHF" FT CDS 3639..4103 FT /transl_table=11 FT /gene="ribH" FT /product="lumazine synthase (b-subunit)" FT /db_xref="GOA:Q44681" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:Q44681" FT /protein_id="CAA65192.1" FT /translation="MNIIQGNLVGTGLKIGIVVGRFNEFITSKLLSGAEDTLIRHGVES FT NDIDVAWVPGAFEIPFAAKKMAETKKYDAVITLGTVIRGATTHYDYVCNEAAKGIAQAG FT TATGVPVIFGIVTTETIEQAIERAGTKAGNKGADCAVSAIEMANLNRSFE" FT CDS 4217..>4286 FT /transl_table=11 FT /gene="ribT" FT /product="reductase" FT /db_xref="UniProtKB/TrEMBL:Q44682" FT /protein_id="CAA65193.1" FT /translation="MLIRYKKSFEKIAMGLLSFMPNE" XX SQ Sequence 4286 BP; 1306 A; 926 C; 1102 G; 952 T; 0 other; aagacgagcc tactgcgatc ggacaaaccc tgtctcagga aaaagaagaa tatacagtga 60 aaacatataa aattacgaaa atagaaggaa atgaatacca cggtacggca gcaaacggca 120 caaaaatcat ttttaacggc gacaagctga aacaggatct ctccgatgtg aaaaaaggag 180 ataagattaa agcgtatttc agcaaatcga accggattga cggcttattg aaggtcgtta 240 aagtaaacga ataaatgaag gcgccctttt tggtaaaaaa aggccttttt attttttctg 300 aataattagg tgcaaattca ttgcgcctcc cgtaaaggat gttataatag cggataagga 360 caaaaaaata ttgattgtat ccttcggggc tgggtgaaaa tcccgaccgg cggtaataag 420 gcgctcctgc gctttacagc ccgtgacccg tatgcatctg tatacggtgg attcagtgaa 480 aagctgaagc cgacagtgaa agtctggatg ggagaaggat gagagaagct atgcaaaaaa 540 taatcatact gtatagtctt atttcctatg gattaaaact ggtaaagccc cgaatgtgta 600 aacattcggg gctttttgac gccaaattgc gtggaagaag ggagggataa cgatggaaga 660 atattatatg aatacggcaa tagagcttgc cagacgcggt gaaggacaga cacagccgaa 720 tcctcttgtc ggcgccgtcg tcgtcaaaaa acgacagatc gtcggaatgg gcgcccactt 780 gcaatacgga gaggcccatg ctgaggtgca cgcgatcaat atggcaggca gcctagcaaa 840 aggcgctgat ttgtatgtga cgcttgagcc ttgcagccat tacggaaaaa caccgccatg 900 tgccgaactg atcatgaaat cagggataaa aagggtgttt atcgctgtgg aagatcccaa 960 tccgcttgta gccggaaaag gcatcacaat gctggaagaa gcgggcatcg aagtgaaaac 1020 ggggcttctc aggcaacagg cagaagagct gaataaaatg tttcttcact tcatgcggac 1080 cggacttccg tatgtcacct tgaaagcggc cgcaagcctt gacgggaaaa cagcgactga 1140 aaccggtgac agcaaatgga ttacatcaga ggcggcaagg cttgatgccc agcaatacag 1200 gaaatcgcat caaaggattc ttgtcggagc aggcacagtc aaagccgata atccgagcct 1260 gacatgcagg ctccccgatg cggtgaagca gccggtcaga gtcattctcg atacaaagct 1320 gaccgttcct gaaacggcaa atgtgctcac tgacggggct gcgccgacat ggatatttac 1380 agccgcaggt tctgacgtcc gaaagaaaga ccggctgacc gcactcggaa taaaagtctt 1440 tacgcttgaa acagaccgca ttcacatccc tgaggtgctc agcattctcg ctgaaaacgg 1500 cataatgtcc gtttatgtgg aaggaggagc atctgtacac ggaagttttg tcaaggcggg 1560 ctgtttcgac gagcttcatt tctatttcgc ccctatatta atcggaggaa cgcttgctcc 1620 cagcttgatc tccggtgaag gttttcaatc aatgaaagat gtcccccatt tacaattcac 1680 acaaattacc caaatcgggc cggatataaa actgacggcc atacctaaag atggaaagga 1740 tggtgacgat gtttacagga atcgttgaag aaacaggcac gatccaagca atcaaaaaga 1800 caggcctttc catggcatta acaattgccg cttcaaaagt gacaagtgat gtgaggcttg 1860 gcgacagcat cgcggtaaac ggcatctgcc tgaccgtgac cggattttct gacaatcaat 1920 ttacggtaga tgtcatgccg gagacagtta aagccacttc gctgaacggc ttgtcaaaag 1980 gcagtaaagt gaatctggaa agagcaatgt ccgccaacgg acggttcggc ggccactttg 2040 tatcagggca cgtagacggg acggcggaaa ttacacggat cgagaaaaaa agcaacgcgg 2100 tctattacga cttaaagctg tctcccgaat tgacgaaaac gctcgtattg aaaggttcga 2160 ttacggtaga cggcgtgagc tcgacgattt tcggcttatc agacgaaagt gtgacggtat 2220 ctgtcattcc gcataccatc tcagaaacga ttttccggac gaaagcagtc ggctcgatcg 2280 tcaatattga gtgcgacatg atcggcaaat acttataccg ctttttgcac aaaacagaac 2340 aaacgaaaag caatcaaact atcacagaag ccttttttag cgagaacggc ttttagaaag 2400 ggagatcaat atgtttcatc cgatagaaga ggcattagaa gcgctgaaaa aaggtgaagt 2460 catcatcgtt gtcgatgatg aagacagaga aaacgaagga gatttcgtag cgctcgctga 2520 gcatgctacg cctgaagtgg tgaattttat ggcgacccac gggagaggcc tgatctgcac 2580 gccgctttct gaagacatcg ccggccggct ggatcttcat ccaatggtcg atcataatac 2640 agactcgcat gagaccgcgt ttacagtcag cattgaccac aagctgacaa aaacgggaat 2700 cagcgctcag gaacgttcct ttacgattca ggcgcttttg gacgaagaat ctgtgcctgg 2760 cgattttcag cgtccgggtc atatttttcc cttaatagca aaaaaaggag gcgtcctgaa 2820 gcgggcgggc cacacggaag cagccgttga cctggcaaaa gcatgcggtt ctcaaggagc 2880 ggacgtcatt tgtgaaatta tgaatgaaga cggcacaatg gcgagagtgc ctgagattag 2940 cgagattgcg aaaagccacc agctgaaaat gattacgata aaagacttaa tagaataccg 3000 ctacaacatt acaacacttg tgaacagaga agttgacatt acgctgccga ctgacttcgg 3060 cacgttccgg gtttacggat atacaaacga ggtggacgga aaagaacatc tcgcctttgt 3120 catgggcgat gtcccgttta acagcggacc cgttcttgtc agagtgcact cagaatgcct 3180 gaccggcgat gtgtttgcat cccaccgctg tgattgcggg cctcagcttc atgccgcgtt 3240 gcgccaaatt gccgaagaag gccgcggcgt tctattgtat ttgcgtcagg aaggcagagg 3300 aatcggtctc atcaataagc tgaaagcgta tcgattgcag gaacaagggt acgacacggt 3360 tgaagcgaac gaagcgctcg gctttctgcc tgacttgcgc aactatggca tcggcgccca 3420 gattctccgc gatttagggg ttcagcatat gaaactttta accaataacc cccggaaaat 3480 cgccggcctt gaagggtacg gactaagcat ttcagatcgg gtgccgcttc aaatggaagc 3540 gagtgagcac aacaagcagt atttacaaac caaaatgaaa aaactcggac acttgcttca 3600 tttctaaaaa caaatctcac aaaaaaggat ggataaatat gaatatcata caaggaaacc 3660 tagtaggaac aggacttaaa atcggaatcg tcgtcggcag atttaatgaa tttattacga 3720 gcaagctgtt aagcggagca gaagacacat tgattcgcca cggtgtagaa tcaaatgaca 3780 ttgatgtcgc ttgggtgccg ggagcgtttg aaatcccgtt tgccgcaaaa aaaatggcgg 3840 aaacgaaaaa atacgatgcc gtcattacac ttggcacggt gatcagagga gcgacaacgc 3900 attatgacta tgtctgcaac gaagcggcaa aaggcatcgc tcaggcggga acggcgacgg 3960 gcgtcccggt tatcttcggc atcgtgacga ctgaaaccat tgagcaggct atcgaacgcg 4020 ccggaacaaa agccggaaat aagggagcgg actgcgcagt atccgccatt gaaatggcaa 4080 atttaaaccg ctcatttgaa taatttgttg aaaagcgttt aaaaccgcgg cgaaaatgat 4140 ataatgtgag aaaacggatc gcctttatgt atccgtttgt atggtgaatg gacattttgg 4200 atatagaggg gtttttatgt taattcgtta taaaaaatcg tttgaaaaga ttgcgatggg 4260 tcttctgtca tttatgccga atgaaa 4286 // ![]() |