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EBI DbfetchID X89392; SV 1; linear; genomic DNA; STD; PLN; 6077 BP. XX AC X89392; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.rostrata PgiC1 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC1 gene. XX OS Clarkia rostrata OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-6077 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX FH Key Location/Qualifiers FH FT source 1..6077 FT /organism="Clarkia rostrata" FT /strain="population LDG 8810" FT /mol_type="genomic DNA" FT /note="PCR-amplified fragments from genomic miniprep DNA" FT /db_xref="taxon:49041" FT CDS join(422..472,555..631,784..865,950..997,1373..1528, FT 1623..1719,1887..1929,2171..2238,2322..2406,2756..2804, FT 3241..3313,3443..3503,3882..3948,4082..4138,4221..4274, FT 4371..4499,4937..5000,5090..5163,5250..5303,5384..5452, FT 5542..5631,5709..5819,5907..5960) FT /gene="PgiC1" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54238" FT /db_xref="HSSP:1HM5" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54238" FT /protein_id="CAA61572.1" FT /translation="MASPALISETEAWKDLKAHLEGIKMTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTISKLYKLADEAHLKQKIDRMYNGDHINTTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWSVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSVDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEELKKENVSEH FT LIPHKTFTGNRPSISILLPTLDAYRIGQVLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHGSRVKGEPVEEGFNFSTKTLLTRYLQATSDVPADPSTLLPNII" FT exon 422..472 FT /number=1 FT intron 473..554 FT /number=1 FT exon 555..631 FT /number=2 FT intron 632..783 FT /number=2 FT exon 784..865 FT /number=3 FT intron 866..949 FT /number=3 FT exon 950..997 FT /number=4 FT intron 998..1372 FT /number=4 FT exon 1373..1528 FT /number=5 FT intron 1529..1622 FT /number=5 FT exon 1623..1719 FT /number=6 FT intron 1720..1886 FT /number=6 FT exon 1887..1929 FT /number=7 FT intron 1930..2170 FT /number=7 FT exon 2171..2238 FT /number=8 FT intron 2239..2321 FT /number=8 FT exon 2322..2406 FT /number=9 FT intron 2407..2755 FT /number=9 FT exon 2756..2804 FT /number=10 FT intron 2805..3240 FT /number=10 FT exon 3241..3313 FT /number=11 FT intron 3314..3442 FT /number=11 FT exon 3443..3503 FT /number=12 FT intron 3504..3881 FT /number=12 FT exon 3882..3948 FT /number=13 FT intron 3949..4081 FT /number=13 FT exon 4082..4138 FT /number=14 FT intron 4139..4220 FT /number=14 FT exon 4221..4274 FT /number=15 FT intron 4275..4370 FT /number=15 FT exon 4371..4499 FT /number=16 FT intron 4500..4936 FT /number=16 FT exon 4937..5000 FT /number=17 FT intron 5001..5089 FT /number=17 FT exon 5090..5163 FT /number=18 FT intron 5164..5249 FT /number=18 FT exon 5250..5303 FT /number=19 FT intron 5304..5383 FT /number=19 FT exon 5384..5452 FT /number=20 FT intron 5453..5541 FT /number=20 FT exon 5542..5631 FT /number=21 FT intron 5632..5708 FT /number=21 FT exon 5709..5819 FT /number=22 FT intron 5820..5906 FT /number=22 FT exon 5907..5960 FT /number=23 XX SQ Sequence 6077 BP; 1645 A; 1154 C; 1125 G; 2153 T; 0 other; gccccacacc ctaccgcacg tgacgacaaa ctcaacataa ctacacgaaa acaagtgctt 60 ctcttcattc gtctccgacc tccgctactt ttcacctgct tctctgaatc gcaatcacca 120 cttacttcag gtaatgacca ttcatttttt gtttaacttc aactacacat ctcaaatttc 180 attgcttttc atacggttag ctttctggca ctatctatcc tgttgttcga taaaaaaaaa 240 tgctgctttt attgctaatt cgattgctca aatggcattg aagataaatc taaattactt 300 ttggaaagtg cagatgcaat tgagattcca gctcactctt tatgtataca tgatctattg 360 agttatctct tgcactaatt tcttgctgtt gtttcttctg aagcgattta gtgcaagtct 420 aatggcttcg ccagctttga tcagcgaaac tgaggcatgg aaggatttga aggtatgtat 480 ttgcttttag tctgggacac tagctcggct agtactgtct ggctgcaaat ttgaacctca 540 taacgaacct gcaggctcat ctcgagggca taaaaatgac tcatctgcgg gaactaatgg 600 gagacactga aagatgccag tcaatgatgg tgtatgtatt tttcatggac tgagctctgt 660 tattgtttcc ttcacttatt gtagggtgaa gcaaattaaa ctacaatttg taatgaataa 720 ctcagttctg tatgcagtcc cctgcctatt ttaagctttg cctatatctg ttaactgttg 780 tagtgagttc gacaacatat tcttggatta ctcacggcag caagcctctc ctgatacaat 840 tagtaagctc tacaagctag cagatgtaag cacctctctg ttgctagttc agtactgatc 900 atgtgttaaa agggaaacat ttccctgatg ttgactttac cttttacagg aagcacatct 960 caagcagaag attgaccgca tgtataatgg tgaccatgta agttttgact aattattgct 1020 gatttagtcc atctgccttt tgctttgctt tgatttgcag ctgctacgta gcaataccag 1080 ctgctacgtc tgtttagctg tcaagtttga tttgttcctt atgtatcatc agaaatacaa 1140 cttgtattgc tccttccgcc tcttgacagc ttggcatatc cattttcctt gaattttaag 1200 agtgaaagat atggctttct ctaagtaaat gttaaatcaa taagtatcag tttaaactgg 1260 ctatattgtt tttaatcctt tactagaact acggtagtga tgcaagagtt gggctgttgc 1320 tcttatatat tcaaaacctt tgttaataaa atagctttcc ttggcctggc agattaacac 1380 tacagagaac aggtcggtac tacatgtcgc tcttcgagct ccaaggaatt cagctatatg 1440 cagtgatgga aagaatgtgg ttccagatgt ttggagtgta cttgacaaga tcaaagactt 1500 ctcagataga gttcgcaatg gttcatgggt aaaatacagc tcctagttga atttgattag 1560 ggattttaag tttcgaaatc attgagttca tctaatctcc aataattgac cacatttgat 1620 agatcggggc cacagggaaa gaactcaaag atgttattgc tgttggtatt ggtggaagct 1680 tcctcggtcc tttgtttgtc cacacagcac ttcaaacagg taccgtatca gacacttata 1740 gtgcttaact gtttgattat cttttatttg tcttctaaag atggtagcta gatttaactg 1800 taccatctaa ttcttgaaag acttttccat tgttgggttt aaaaatgaat acaagtttat 1860 accttacact ttgtggaaac ttgcagatcc agaggccagt aagaatgcta gaggccgtga 1920 gctgcgtttg taagtctcag ctactgtcaa tgtatcatta ttttcctctt tgtggtttaa 1980 atggatatta aaggccagag gaaggaaaag aggaaaagcc ataatgttca gctgaccaat 2040 tatcatatcc tctttgctaa tatactcttt gagctccctt tgaaaataat ggcatgcaca 2100 gtcatccaag ggtacttaaa attgagtatt ttcattatgg aagcttgacc tattattctt 2160 ttttgtgcag tctggcaaat gttgacccta ttgacgttgc aaggaacatc tccggtttaa 2220 acccagaaac tacccttggt aattgtctca ctctcattat gctggtttta gatatcgttt 2280 ctattttggc ttttgtttga tgatcttaat cttacctgca gttgtcgttg tttcaaagac 2340 ttttacaaca gcagaaacta tgctcaatgc tcgaactttg agggaatgga tatcttctgc 2400 tctcgggttt gtcttcaaac tgctaacttt tttggtagct tttacataat tatggagcag 2460 actagtacaa gattctgtac cgtaatataa cttttggcaa ttctggaagc gaaatgatat 2520 tgattttcag tatgcaactt catccatgca gctatctatg gcaatcccat agctgcaaca 2580 gtctagaaac ttctgcagat attgttgtcc agtatcttaa taaatcacta ctagtttttt 2640 ttagtattgc actattgaaa tttcagccta gtgatatatc ccaacattta acattaaaag 2700 aagatatatg ctgtctctct ctctctgacc aaagtcatta taatgttggt tacagccctt 2760 ctgccgttgc aaagcacatg gttgcagtta gtacaaatct tccggtatga ttttctcttt 2820 catatattat tttcattaca tccttcaggt caaattttta ctggtattct ccaattataa 2880 gcactgtcta tcttgttatt atatgctttg aatcttcttg acgccttttc aaataagcca 2940 gcattggaac ttataaagaa tgatttattc aagcatcact ttctgcacat aattaattaa 3000 attttccatt gctgattagg ttttcttttt tgacgaagta aattctatga ctgctcataa 3060 tgtatataat aggcctatct ccatgtatat tatttatgct aaatatcgga agcagtatct 3120 gtctagctat gcagtatctg acattctacg attagttagt tgggctatca gggggtggtt 3180 acccaataat ttctgtgatg acctcgttac ttacctggat ctcgtgtgat tcttctgcag 3240 cttgttgaaa agtttggcat tgatcctaac aatgcttttg cattttggga ttgggttggt 3300 gggcgatata gtggtaagct atcctatttt tcttaatcca tatatttaat ttaaataatt 3360 ttgcatggat tgtttgagct gttcatcgag tctctcctgt ggtactaata attatatgtt 3420 cacatctata ttattgtggc agtctgtagt gctgttggag tgttgccgtt atcccttcag 3480 tatggctttg ctgttgtgga gaagtatgta aacctatcat ttcgcacatc atatcaattt 3540 tcttctgctt ttccgtgtca atacatccaa tcgctttcat tgacatttta tttttatttt 3600 ctggaagttc caaaagataa gaatatgttt ggcaatatat acatgtataa actatatata 3660 ttctttggaa acacccttct gcagtgaaat acataaacaa attattaaca aacaccggag 3720 aggaatgtag acatttttgg agtaaattgc atgatagaga tcaggaaaat tgtttgacct 3780 cttcgaaaag tatagttcat atatactgct gattattatg gagttgacta attttttttt 3840 aataagtggt catagtaaaa tgttgtaaat tctttatgaa gattcttgca aggggctcac 3900 agcattgatc agcatttctc ttctgcgcca tttgagaaaa atatacctgt aagttccatt 3960 gatacacaca cttgtatagt aaagtaatga ttggatgcac aagttgatgt ttagttattt 4020 cagccttacc cccttttata agtttgatga cgaatttgaa ttgattggat ctttaataca 4080 ggtacttcta ggtttgttga gtgtatggaa tgtatcattt cttggatacc ctgcaagggt 4140 gagttcacat gatatgctta gaggcattat ctcctttatt tagtagtctt taatccactg 4200 aagcaatcaa ttctttctag gccatcttac catactccca agcactggag aaattggctc 4260 cacatataca acaggtaagc tagtgataac atttcttttt tagtaataat tagggttttg 4320 gaactggaat gaagttagtt ttgtgacctc ttcttgatgt gactttacag gtcagcatgg 4380 agagcaacgg caagggtgtg tcggtagatg gtttgcctct tccctttgag tctggtgaaa 4440 ttgactttgg tgaaccgggt acaaatgggc agcacagttt ttaccagctg attcaccagg 4500 taacttcctt actatctcag gtagacacgt ttcacttctg ccatatttat ccttgacaag 4560 gtaaatacct tctattcgat tatttcccgg tatgtgcatt gtggactgta tccattttat 4620 tttcaactaa ttttgaacta aaacttcaat tttttttttt ttttcccttc gagcaaaaaa 4680 ctactgcaaa gatcggacct ttcaccatgc tctgctcaca aggcaattgc gagttgtatt 4740 cttgtttagc caaatccctt tctcatccca tatgtgatta ggactactac tcaaattcac 4800 tgttcgatga ttccttcaaa atgttcagct gcacaaatac atttctccac tactaataat 4860 ttagttgagg ctgaattaag caaagtccac taagtaagtt tctgtttgct aacacatgca 4920 tcttgaataa caacagggcc gtgtcattcc ctgcgatttt attggggtcg tgaagagcca 4980 gcaacctgtt tacctcaaag gtgaaaattg cagctagcta tatttctaac taatgaagct 5040 ttatatttct acagtctaca tgagtagtta tttgtcactt ttcttgtagg tgaggtggtt 5100 aataaccatg atgaactgat gtccaatttt tttgcccagc ctgatgcttt ggcatatggc 5160 aaggtaaatc ctaatccatg tgcaatagct ttcaaatccg ctctttcatg aaacttatct 5220 gcatacaata caaattgttg ttggtttaga ccccagagga gcttaagaag gagaatgttt 5280 cagagcatct tattcctcac aaggtaacac tctctctgat ttggggaatt caacatcttc 5340 ttattcgttg taaagctaat attaatgaat tgttgtgtca tagacattca ctggtaacag 5400 gccatctatt agcattctgc ttccaacatt ggatgcttac cgtattggac aggtctgttt 5460 gttctgcttc aaagattacc gatatgtttc cctttttgta atatctattt ggtgtgttac 5520 tgtttctttc tggactatca ggtgttggca atatatgaac atagagttgc agtgcaaggt 5580 ttcgtatggg gcatcaactc atttgaccag tggggagtgg agttaggaaa ggtgaagtcc 5640 ctgcccattc aaaataactt ggcctcattt tgttttaggc cttaataatc tgttgttatc 5700 tgttgcagtc tctggcaaca caagtccgaa agcaactcca tggatctcga gtcaagggag 5760 aacctgtgga ggagggtttc aacttcagca ctaaaacctt gttaacaaga tacctccagg 5820 tattctattt taactggcta gtctttcttt gctgaggtgg ctaaatcaat gtagttaatt 5880 aagcttaatc ttattctcat gtacaggcaa cttccgatgt ccctgctgat ccttccaccc 5940 tactgcctaa catcatatga ttaggctgct tttctatttt ttgaagacgg atgtatgtta 6000 tccgtagagt tgtcatcttc ttaattgctc ttcatacact tcatcactct ctcttgtatc 6060 tggaatccca taccttt 6077 // |
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