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EBI DbfetchID X89391; SV 1; linear; genomic DNA; STD; PLN; 5869 BP. XX AC X89391; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.concinna PgiC2 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC2 gene. XX OS Clarkia concinna OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-5869 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX FH Key Location/Qualifiers FH FT source 1..5869 FT /organism="Clarkia concinna" FT /sub_species="automixa" FT /strain="population LDG 8701" FT /mol_type="genomic DNA" FT /note="PCR-amplified fragments from genomic miniprep DNA" FT /db_xref="taxon:49040" FT CDS join(477..527,610..686,833..914,1005..1052,1435..1590, FT 1684..1780,1948..1990,2237..2304,2384..2468,2827..2875, FT 3341..3413,3511..3571,3782..3848,3973..4029,4117..4170, FT 4256..4384,4635..4698,4784..4857,4929..4982,5065..5133, FT 5275..5364,5450..5560,5681..5731) FT /gene="PgiC2" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54241" FT /db_xref="InterPro:IPR001672" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54241" FT /protein_id="CAA61571.1" FT /translation="MATPSLISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTINKLFKLADAAHLKRKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWSVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNAIGRELRFLANVDPIDAAKNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGASAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSVDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKKENVSEH FT LIPHKTFNGNRPSLSILLPTLDAYRIGQLLAVYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEAVEEGFNFSTKTLLTRYLEASSDVPADPSTLLPKI" FT exon 477..527 FT /number=1 FT intron 528..609 FT /number=1 FT exon 610..686 FT /number=2 FT intron 687..832 FT /number=2 FT exon 833..914 FT /number=3 FT intron 915..1004 FT /number=3 FT exon 1005..1052 FT /number=4 FT intron 1053..1434 FT /number=4 FT exon 1435..1590 FT /number=5 FT intron 1591..1683 FT /number=5 FT exon 1684..1780 FT /number=6 FT intron 1781..1947 FT /number=6 FT exon 1948..1990 FT /number=7 FT intron 1991..2236 FT /number=7 FT exon 2237..2304 FT /number=8 FT intron 2305..2383 FT /number=8 FT exon 2384..2468 FT /number=9 FT intron 2469..2826 FT /number=9 FT exon 2827..2875 FT /number=10 FT intron 2876..3340 FT /number=10 FT exon 3341..3413 FT /number=11 FT intron 3414..3510 FT /number=11 FT exon 3511..3571 FT /number=12 FT intron 3572..3781 FT /number=12 FT exon 3782..3848 FT /number=13 FT intron 3849..3972 FT /number=13 FT exon 3973..4029 FT /number=14 FT intron 4030..4116 FT /number=14 FT exon 4117..4170 FT /number=15 FT intron 4171..4255 FT /number=15 FT exon 4256..4384 FT /number=16 FT intron 4385..4634 FT /number=16 FT exon 4635..4698 FT /number=17 FT intron 4699..4783 FT /number=17 FT exon 4784..4857 FT /number=18 FT intron 4858..4928 FT /number=18 FT exon 4929..4982 FT /number=19 FT intron 4983..5064 FT /number=19 FT exon 5065..5133 FT /number=20 FT intron 5134..5274 FT /number=20 FT exon 5275..5364 FT /number=21 FT intron 5365..5449 FT /number=21 FT exon 5450..5560 FT /number=22 FT intron 5561..5680 FT /number=22 FT exon 5681..5731 FT /number=23 XX SQ Sequence 5869 BP; 1545 A; 1150 C; 1103 G; 2053 T; 18 other; gcaccacacc ccctgcacgt gacgacaatc aaagacaaaa caagtctttc tcttccttcg 60 tctccgacct ccgttacttt ctatctgctt ctctgaatct cctcagcttc ttccaccatt 120 cgccatcacc accttcttca ggtaggcact cttagtcatt ttgggcttaa cttcaactac 180 gcatctcaac tttcattgct ttttatttga ttatcatcat ttttagcttt ctggcactat 240 ctgttccgct gttcgatcaa agaacccagc tcatctccat tggagcaatc cgaaaatgct 300 gcttttattg ctaatttgat tgnnnnnnnn nnnnnnnnnn taaacctaaa gtatttttgg 360 aaagagcaga tgcaattgag agtccagctc actctctatg tatacatgat ctattgagtg 420 atctatggca ctaatttctt gatgtttttc ttcttaagcg atttagtgca agttcaatgg 480 ctacaccatc tttgatcagc gaaactgagg catggaagga tttgaaggta tgtatttgct 540 tttagccttg gacactatct cggttagtaa tgtctggctg caaatttgaa cctcataatg 600 cacctgcagg ctcatctcga gggcataaaa aggacgcatc tgcgggaatt aatgggagac 660 actgaaagat gccagtcaat gatggtgtta agtatttttt tcatggactg agctttgcta 720 ttgtttcctt ctcttttagt agcaagttaa actacaatct ctaatgaata agccagttct 780 gtatcattcc cgtgcccatt ttaagctttg cattatctgt ttactgttgt agtgagttcg 840 acaacatatt cttggactac tcgcggcagc aagcctctcc tgacacaatt aataagctct 900 tcaaactagc agatgtaagc acctctctgt agctaggcca gctccagcac tgatcatctg 960 ttaaaagggc aacattttcc tgatgttaac ttgatctttt ccaggcagca catctcaagc 1020 ggaagattga ccgcatgtat aatggagacc acgtaagttt tgactattta ttgctgatct 1080 agtctatcta atttttgctt tgatttgtag agtcctacgt gctgaccagt gtaactgtct 1140 atctagcagt caagtttgat ttgttcctta gatatcgtga gaaatacaac tcatattgct 1200 ccttccacct ggggattctg ttaaaatgtt ttcagcataa catatccatt tttattggat 1260 tttaagagtg atatatatgc ctatctcaaa ataaatgtaa atatcaagtg tttgcttaaa 1320 ctatctatat tgtttttaat cttttactag aactacggga atgatgggat agttgaacag 1380 ttgctcttat cttttcaaag cctgttaata aaatatcttt ccttggcctg gcagattaac 1440 agtacggaaa acagatcggt actacatgtc gctcttcgag ctccaaggaa ttcagctata 1500 tgcagtgatg gaaagaatgt ggttccagat gtttggagtg tacttgacaa gatcaaagac 1560 ttctcagaga gagttcgcaa tggttcatgg gtaaatacag ctcctagttg aatttgatta 1620 ggatatttaa gatccgaaat cattgagttc ttctaatctc caacaagtgg ccacatttga 1680 caggttgggg ccacagggaa agaactcaag gatgttattg ctgttggtat tggtggcagc 1740 ttccttggtc ctttgtttgt ccacacagca cttcaaacag gtactgtgtc tgacaattat 1800 gatgcttaaa tggttaatta tctttaattt gtggtctaaa gatggtagct agattcaact 1860 gtagcatcta attcttcaaa gggtcttcca tggttgggtt taaaaatgag tacgagttca 1920 taacttatag tttgtggaaa cttgcagatc cagaagccag taagaatgct ataggccggg 1980 agctgcgttt gtaagtctca gctatgcatc gctctttttt tctttgtggt ttacgtgatt 2040 attaactata gactagatgg atattaaagg tcagaggaaa taaaggagga aaagccataa 2100 tgttcaactt caaatgacca atcttcgtat tctctttgag ctccctttga aaataacggc 2160 atgcacaggc atccaggcgt acttaaaact gactattttc gttatggaag gttaacctat 2220 tattctgttt gtacagtctg gcaaatgttg accctattga cgctgcaaag aacatctcgg 2280 gtttaaaccc agaaactact cttggtaact gtctctcatt acgctggttt taggtatcat 2340 ttttcttttg ccttttgttt gatgatctta atcctaactg cagttgtcgt tgtttcaaag 2400 acttttacaa cagccgaaac tatgctcaat gctcgaactt tgagggaatg gatatcttct 2460 gctcttgggt ttgtctaata ctgctaactt ttttttggta gctttaagta caagattcag 2520 taccaaaata tagcttttgc aatctggaag agaaattata tagattttca gtatgcaact 2580 tcatccatgc agctagggta ataccagagc tgcaacacta tagaaaacag tttataaact 2640 tttgcagata ttgctgtccg tatctcaata aatcactact attttttctt agtattgcgc 2700 tattaaattc gagatgcact tattgatata tcccaacttt gtaacattaa aaaatggtat 2760 atgctctctc tctatttctc tctctctctc tctcgctgac caaagtcatt aaaatgttgg 2820 ttacagcgct tctgctgttg caaagcacat ggttgcagtt agtacaaatc ttccggtatg 2880 atttgctctt tcatatatta ttttcttgac atcatcgtct aatttttact ggtatcctcc 2940 aataataggc acatgtgttt cttgttatta tatgatttga atcttctcga cgctcttcaa 3000 ataagtcagc atgggaactt aaaaggaatg atttattcaa gcatctttat gggcttaatt 3060 aattgaattg tccatagaaa ttaggattta ttgtttcatg aagaaatttc tctgactgct 3120 catattgtat atggtaggcc tacccccatg tatattattt ttctgctaaa tatcgggggc 3180 actatatgtg tctagctatg cagtttcatt tgatgagttt tagactattg agattttgac 3240 attctatgct tagttagtta tgtggactat caggggttta cccaataatt tctgtgatgg 3300 agctcgttac ttacctagat ctcttattct tcttctgcag cttgttgaaa agtttggcat 3360 tgatcctaac aatgcttttg cattttggga ttgggttggt ggccgatata gtggtaagct 3420 atcctttttt tctgaatccc acagattcaa tccaattaat ttccctatgg tgccaatact 3480 tatatattta aatctatttt cttgtggcag tctgtagtgc tgtcggagtg ttgccattat 3540 ctcttcagta tggctttgct gttgtggaga agtatgtaaa actatcattt cacacatatc 3600 aattttcctc ttgttttcca tgttgtcaat acatccaatc gcttccattg acatttaatg 3660 ttcgaaaaat atagttcata tatgctgctt actattatgg attgtactag cttttcatcg 3720 caaaagttta attagtggtc aaggctctct tataattaaa atgttgtaaa ttgttatgca 3780 gattcttgca aggggctcac agcattgatc agcacttctc ctctgcacca tttgagaaaa 3840 atatacctgt aagttcccac tagatacact ctagtaatac ttggatgcgc gagctgatgt 3900 tttagtgatt tcggccatac cttcttttat aagtttgatg ataagcttga atttattgaa 3960 tccttaatac aggtacttct aggtttgtta agtgtatgga atgtatcatt tcttggttac 4020 cctgcaaggg tgagttctca tgaatatgcc taaggcataa tctcctttat taagtagcct 4080 ctaatccact ccactgaagc aatcaattct ttctaggcca tcttaccata ctcccaagca 4140 ctggagaaat tggctccaca tatacaacag gtatgctagt gatcacgttt ctttcttagt 4200 aataataatt atcttggaat tgttagcttt gtctctttgt gatgtgactt tacaggtcag 4260 catggagagc aacggcaagg gtgtgtccgt tgatggtctg cctcttccct ttgagtctgg 4320 tgaaattgac tttggtgaac caggtacaaa tgggcagcac agtttttacc agttgattca 4380 ccaggtaact tactatctca cgtagtcgcg tatcacttgt ggtcctaata taggaatacc 4440 ctgtcaccat gctcacaagc caattgcgag ttgtgttctt gtttagccaa ctcccttctc 4500 atcctattca ctgtttaacg attacttcaa aatgttcagc tgcataaatc catttcttca 4560 ctaatttggt tgaggttgaa ttaagcaaag tccaatgagt ttctgtttcc taacacatgc 4620 atcttgaata acagggccgt gtcattccct gtgattttat tggggtcgtg aagagccagc 4680 aacctgttta cctcaaaggt gaaaattgca gctagtggta gctatatttc taattaggct 4740 ttatattcct acactacatc agttatttcc acttttcctg caggtgaagt ggtcaataac 4800 catgatgaac tgatgtccaa cttttttgct cagcccgatg ctttggcata tggcaaggta 4860 actcctaatt aatccatccg ctctttcaaa ttaccatgaa acttaactgc atacaaatgt 4920 tgctttagac cccagaacag ctaaagaagg agaatgtttc agagcatctt attcctcaca 4980 aggtattact ctgatttggg gaattctaca tcttattcct cgtgtaaagc ttatatgaat 5040 taatttttgt gtcatattat gcagacattc aatggtaata ggccatctct tagcattctg 5100 cttccaacat tggatgctta ccgtattgga caggtctgta tgtctctctc aatttgttct 5160 gcttcaaaat attacctttc ctgattcccg attcatttcc ttttagaaat agttgtttaa 5220 tctatttggt gaggatagat actgaatggt gtgttactgt ttccgcactg tcagctgttg 5280 gcagtttatg aacatagagt tgcagtgcaa ggttttgtct ggggcatcaa ctcatttgac 5340 cagtggggag tggagttagg aaaggtgaac tgccattcaa aatgcgggtt ctttgcaata 5400 acttggcttc attttgtttt ggtctctctt aatctgttat ttgttgcagt ctctggcaac 5460 acaagtccga aagcaactcc atgcatctcg agtaaaggga gaagctgtgg aggagggctt 5520 caacttcagc actaaaacct tgttaacaag atacctcgag gtatttatct ggctaaacca 5580 aaacatgcct agtctttctt tgctgaggtg gcagattggc gtctctgtca gttgaatcta 5640 aatgtaggta attaagcgaa tcatattatc atgtttacag gcatcttctg atgtccctgc 5700 tgatccttcc accctgctgc ctaagatatg aatattctgc tttttgaaga cggatgttat 5760 ccgtagagtt gtcatctctt ttgcctttat gggttctaat tgctcttctt aacatgcaac 5820 tacactgcag caatctctgg ctctcttgta tctggaaacc aataccttt 5869 // |
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