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EBI DbfetchID X89390; SV 1; linear; genomic DNA; STD; PLN; 6167 BP. XX AC X89390; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 11) XX DE C.concinna PgiC1 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC1 gene. XX OS Clarkia concinna OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-6167 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX FH Key Location/Qualifiers FH FT source 1..6167 FT /organism="Clarkia concinna" FT /sub_species="automixa" FT /strain="population LDG 8701" FT /mol_type="genomic DNA" FT /note="PCR-amplified fragments from genomic miniprep DNA" FT /db_xref="taxon:49040" FT CDS join(436..486,612..688,842..923,1015..1062,1423..1578, FT 1674..1770,1937..1979,2244..2311,2394..2478,2836..2884, FT 3291..3363,3490..3550,3972..4038,4164..4220,4307..4360, FT 4451..4579,5026..5089,5175..5248,5334..5387,5466..5534, FT 5676..5765,5858..5968,5969..6019) FT /gene="PgiC1" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54235" FT /db_xref="InterPro:IPR001672" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54235" FT /protein_id="CAA61570.1" FT /translation="MASPALISETEAWKDLKSHLEGIKKTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTISKLYKLADEAHLKQKIDRMYNGDHINSTENRSVLHVALRASR FT NSAISSDGKNVVPDVWNVLDKIKDFSDRARNGSWVGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKKENVSEH FT LIPHKTFTGNRPSLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI" FT exon 436..486 FT /number=1 FT intron 487..611 FT /number=1 FT exon 612..688 FT /number=2 FT intron 689..841 FT /number=2 FT exon 842..923 FT /number=3 FT intron 924..1014 FT /number=3 FT exon 1015..1062 FT /number=4 FT intron 1063..1422 FT /number=4 FT exon 1423..1578 FT /number=5 FT intron 1579..1673 FT /number=5 FT exon 1674..1770 FT /number=6 FT intron 1771..1936 FT /number=6 FT exon 1937..1979 FT /number=7 FT intron 1980..2243 FT /number=7 FT exon 2244..2311 FT /number=8 FT intron 2312..2393 FT /number=8 FT exon 2394..2478 FT /number=9 FT intron 2479..2835 FT /number=9 FT exon 2836..2884 FT /number=10 FT intron 2885..3290 FT /number=10 FT exon 3291..3363 FT /number=11 FT intron 3364..3489 FT /number=11 FT exon 3490..3550 FT /number=12 FT intron 3551..3971 FT /number=12 FT exon 3972..4038 FT /number=13 FT intron 4039..4163 FT /number=13 FT exon 4164..4220 FT /number=14 FT intron 4221..4306 FT /number=14 FT exon 4307..4360 FT /number=15 FT intron 4361..4450 FT /number=15 FT exon 4451..4579 FT /number=16 FT intron 4580..5025 FT /number=16 FT exon 5026..5089 FT /number=17 FT intron 5090..5174 FT /number=17 FT exon 5175..5248 FT /number=18 FT intron 5249..5333 FT /number=18 FT exon 5334..5387 FT /number=19 FT intron 5388..5465 FT /number=19 FT exon 5466..5534 FT /number=20 FT intron 5535..5675 FT /number=20 FT exon 5676..5765 FT /number=21 FT intron 5766..5857 FT /number=21 FT exon 5858..5968 FT /number=22 FT exon 5969..6019 FT /number=23 XX SQ Sequence 6167 BP; 1694 A; 1186 C; 1134 G; 2153 T; 0 other; gccccacacc ctactgcacg tgacgacaaa ctcaacatca ctacacgaaa acaagtgctt 60 ctcttcattc gtctccgacc ttcgctactt tcatctgctt ctctgcatcg ccatcaccac 120 cttcttcagg tactttcagt catttttggt tcaacttcaa atttcattgc tttttatatg 180 gttaactttc tggcactatt tgttctgttg ttcgatcaaa gaatccagct catctccatt 240 agagcaatcc gaaaatgctg cttttattgc taatttgatt ggtcaaatga ctttgaagat 300 aaatctaaag tatttttgga aagatcagat gcaattgaga gtccagctca ctctttatgt 360 atacatgatc tattgattga tctctggcac taatttcttg ctgttgttct tctgaagcga 420 tttagtgcaa atttaatggc ttcgccagct ctgatcagcg aaactgaggc atggaaggat 480 ttgaaggtat gtatttgctt ttattctggg atactagctc ggctagtaat gtctggcttt 540 cgagcaaaaa aataaagaat aataatgata gtaatgtctg ctgcaaattt gaacctcata 600 acaacctgca gtctcatctc gagggcataa aaaagactca tctgcgggaa ttaatgggag 660 acactgaaag atgccagtca atgatggtgt atgtattttt catggactga gctctgctat 720 tgtttccttt catcttttag tagggtgaaa cgagttgatt acaatctgta atgaataatt 780 cagttctgta tgcagtcccg tgcctgtttt aagctttgca catatctgtt tactgttgta 840 gtgagttcga caacatattc ttggactact cacggcagca agcctctccg gacacaatta 900 gtaagctcta caagctagca gatgtaagca cctctctgtt gctagttcag taccgaatac 960 tgatcatgtg ttaaaagggc aacatttccc tgacgttgac ttgatctttt acaggaagca 1020 catctcaaac agaagattga tcgcatgtat aatggtgacc atgtatgttt tgactaatta 1080 ttgctgatct agtccatcta ctttttgctt tgctttgatt tacagctgct atgtgctgac 1140 agtgtaacca ctgtctcttt agctgtcaag tttgatttgt tcctttgata tcatgggaaa 1200 tacaacttgt attgctcctt ccgcctcttg agacattggc atatccattt tcttgatttt 1260 aaaagtgaaa gatattgcct atctctaagt aaatgtaaat attaagtatc agtttaaact 1320 ggctatattg tttttaatct tttactagta atacgggagg atggaagagt tgggccgttg 1380 ctccaaaacc tgttaataaa atagctttct ttttcctgtc agattaacag tacagaaaac 1440 aggtctgtac tacatgtcgc tcttcgagct tcaaggaatt cagctatatc aagtgatgga 1500 aagaatgtgg ttccagatgt ttggaatgta cttgacaaga tcaaagactt ctcagataga 1560 gctcgcaatg gttcatgggt aaaatgcagc tcctagttga atttgattag ggatattaaa 1620 gttccgaaat cattgagttc atctaatctt caataattga ccacatttgg taggtcgggg 1680 ccacagggaa agaactgaag gatgttattg ctgttggtat tggtggcagc ttcctcggcc 1740 ctttgtttgt ccacacagca cttcaaacag gtacagtatc agccacttat aatgcttaac 1800 tgtttcatta tcttttattt gtcttctaaa gatagctaaa ttcaactgta ccatctaaat 1860 cttgaaaggc tcttccattg ttgggtttaa aaatgaatac tagttcatac cttatatact 1920 ttgtggaaac ttgcagatcc agaggccagt aagaatgcta gagggcgtga gctgcgtttg 1980 taagtctcaa ctactgtcaa tgcatcgttc tttttttctt tgtggtttcc atgattatta 2040 actatagaac tatatggata ttaaaggtca gaggaaggaa aagaggaaaa gccataatgt 2100 acaactgacc aattatcata tcctctttgc taatatactc tttgagaccc cttttgaaaa 2160 taatggcatg cataggcatc caagcgtact aaaaaatgag aattttcatt atggaagctt 2220 gacctattat tctgtttgta cagtctggca aatgttgacc ctattgacgt tgcaaggaac 2280 atctcgggtt taaacccaga aactaccctt ggtaattgtc tatcttgtta tgctggtttt 2340 aggtatcgtt tctatctttg gcttttgttt gatgatctta atcttacctg cagttgtcgt 2400 tgtttcaaag acttttacaa cagcagaaac catgctcaat gcacgaactt tgagggaatg 2460 gatatcttct gctctcgggt ttgtcttcat actgctaact tttttgctag cttttacata 2520 attacggagc agactagtac aagattcagt accataatat aacttttggc aattttggaa 2580 gtgaaatgat ataaattttc agtatgcaac ttcatccatg cagctatggc aaacccatag 2640 ctgcaacact atagaaagca gtctagaaac ttctgcagat attgttgtcc agtatcttaa 2700 taaatcacta ctagtttttc ttagtattgc agtatagaaa tttcagatgc gcctactgat 2760 atataccaac ttttatcatt aaaagaagat atatgctctc tctctctgac caaagtcatt 2820 aaaatgtttg tacagccctt ctgccgttgc aaagcacatg gttgcagtta gtacaaatct 2880 tccggtatga tttgctcttt catatattat ttgcttgaca tccttcaggt ctaattttta 2940 ctggcattct ccaattataa gaacatttct atcttgttat tatatgcttt gaatcttctt 3000 gacgcctctt caaataagcc agcatgggaa cttagacaat gatttgctca agcatctctt 3060 tttgcacgta attaattaaa ttgtcgatag caaattagtt tttcttgttt gacgaagtaa 3120 attctctgac tgctcatatt gtatatgata ggcctatccc atgtatatta tttatgctaa 3180 atatcggaag cagtatctgt ctagctatgc agtttcattt gggggtgttt acccagtaat 3240 ttctgtgatg gagctcttac ttacctggat ctcgtatgct tcttctgcag cttgttgaaa 3300 agtttggcat tgatcctaat aatgcttttg cattttggga ttgggttggt ggccgatata 3360 gtggtaagct ttcctttttt cttgatccca tagatttact ttatataatt ttgcatggat 3420 cgttggtatt cctcacgtct cccctgtggt tctaatacat atatacttat gtctatattt 3480 ttgtggcagt ctgtagtgct gttggagtgt tgccattatc tcttcagtat ggctttgctg 3540 ttgtggagaa gtacgtaaac ctatcatttc gcacaccata tcaattttct tctggttttc 3600 catgttgtca atacatccaa tcgcttccat tgacatttaa tttttatttt ctggaaagct 3660 tctggaagct cccaaaaata agaatgtgtt tggtaatata tacatgcata ctctatatat 3720 atatatattc tctggaaaga ctcttctgca gtgaaataca taaacaaatt aacaaacacc 3780 agagaggagt gtagacattt ttggagtaga tgccttgtag taaattgcat gatagagagc 3840 aggaaaattg tttctccgct ttgaaaagta taattcatat atgctgctta ctattatgga 3900 gttgactaaa aagttcaata agtggtcata atgctctctt ataaataaaa tgttgtgaat 3960 tgtttatgaa gattcttgca aggggctcac agcattgatc agcacttctc ctctgcgcca 4020 tttgagaaaa atatacctgt aagttccaat tgatacacat ctatggtaat gcttggatgc 4080 acaagttgat gtttagttat ttcgcctata cccttttttg taagtttgat gacaaaattg 4140 aattgattga atccttaata caggtacttc taggtttgtt gagtgtgtgg aatgtatcat 4200 ttcttggata ccctgcaagg gtgagctcac atgatatgct tgaggcacta tctcctttat 4260 ttagtagtat ttaatccact ccactgaagc aatcaattat ttctaggcca tcttaccata 4320 ctcccaagca ctggagaaac tggctccaca tatacaacag gtatgctaat gatcacattt 4380 ttttcttagt aataattatc ttgaaactgg aatgaagtta actttgtttc ttcgtgatgt 4440 gactttacag gtcagcatgg agagcaatgg caagggtgtg tccatagatg gtttgcctct 4500 tccatttgag tctggtgaaa ttgactttgg tgaaccaggt acaaatgggc agcacagctt 4560 ttaccagctg attcaccagg taacttcttt actatctcag gtagtcacgt atcacttgtg 4620 ccatatttat ccttaaatta ttctatttca tccagaatta agagatacta atataggaat 4680 accttgtatt ctattattcc cccgtatgtg cattgtggac tgtgtccatt ttattctcag 4740 ctaattttga actaaaactt caaaaaaatt ccctttcgag caaaaaaact actacaaaga 4800 tctggacctt tcaccatgct cacaagccaa ttgcgagttg tgttcttgtt tagccaactc 4860 acttctcatc ctatatgtgc ttaggactat tctcatattc actgtttaat gatttcttca 4920 aaatgttcag ctgcacaaat ccatttcttc tctaacttag ttgaggttga attaagcaaa 4980 gtccactgag tttctgtttg ataacatatg catcttgaat aacaggggcg tgtcattccc 5040 tgcgatttta ttggggtcgt gaagagccag caacctgttt acctcaaagg tgaaattcgc 5100 agctggagct agctatattt ctaatgaagc tttatattcc tacattacat cagttatttc 5160 cacttttcct gcaggtgaag tggttaataa ccatgatgaa ctgatgtcca atttttttgc 5220 ccagcctgat gctttggcat atggcaaggt aactcctaat ccatctgcaa tagctttcaa 5280 atccgctctt tcaaattacc atgaaagtta actgcaaaca atttttgctt tagaccccag 5340 aacagctaaa gaaggagaat gtttcagagc atcttattcc tcacaaggta ttacttggat 5400 aattcaacat cttattcctt gtcaatctta tattagttac caacttgttg tgttatatta 5460 tgcagacatt tactggtaat aggccatctc ttagcattct gcttccaaca ttggatgctt 5520 accgtattgg acaggtctgt atgtccatat ctatttgttc tgcttcaaaa tataacctcc 5580 ctttattccc gatacatttc cttatagaaa tagttgttta atcaatttgg tgaggataga 5640 tactgaatgg tgtgttgctg tttccacgct ttcagctgtt ggctatttat gaacatagag 5700 ttgcagtgca aggtttcgta tggggtatca actcatttga ccagtgggga gtggagttag 5760 gaaaggtgaa gtaccacctc ctcgccatcc aaaatacggt taatcgcaat aacttagctt 5820 tcattttgtt ttggtcataa tctgttattt gttgcagtct ctggcaacac aagtccgaaa 5880 gcaactccat gcatctcgag tgaagggaga acctgtggag gagggcttca acttcagcac 5940 taaaaccttg ttaacaagat acctcgaggc aacttccgat gtccctgctg atccttccac 6000 actgctgcct aacatatgaa tatgcgcttt tcgacttttt gaagacggat gttatccgta 6060 gagttgtcat ctcttttgcc tttctggcct ctaattgttg ttcttaatat gcaactacac 6120 tgcagcaatc tcttgactct ctcttgtatc tggaatccaa taccttt 6167 // |
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