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EBI DbfetchID X89389; SV 1; linear; genomic DNA; STD; PLN; 8333 BP. XX AC X89389; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.mildrediae PgiC1 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC1 gene. XX OS Clarkia mildrediae OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-8333 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX FH Key Location/Qualifiers FH FT source 1..8333 FT /organism="Clarkia mildrediae" FT /strain="population Weeden 165A" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="M11" FT /db_xref="taxon:49756" FT CDS join(1358..1408,1491..1567,1720..1801,1886..1933, FT 2306..2461,2564..2660,2821..2863,3111..3178,3260..3344, FT 3700..3748,4565..4637,4765..4825,5237..5303,5428..5484, FT 5572..5625,5716..5844,6288..6351,6436..6509,6595..6648, FT 6790..6858,6958..7047,7139..7246,7364..7414) FT /gene="PgiC1" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54237" FT /db_xref="InterPro:IPR001672" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54237" FT /protein_id="CAA61569.1" FT /translation="MASPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQAIPDTIKKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT DSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPTAVAKHMVAVSTNIPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKNENVAEH FT LIPHKTFTGNRPSLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHGSRVKGEPVEGFNFSTKTLLTKYLEATSDVPADPSTLLPNI" FT exon 1358..1408 FT /number=1 FT intron 1409..1490 FT /number=1 FT exon 1491..1567 FT /number=2 FT intron 1568..1719 FT /number=2 FT exon 1720..1801 FT /number=3 FT intron 1802..1885 FT /number=3 FT exon 1886..1933 FT /number=4 FT intron 1934..2305 FT /number=4 FT exon 2306..2461 FT /number=5 FT intron 2462..2563 FT /number=5 FT exon 2564..2660 FT /number=6 FT intron 2661..2820 FT /number=6 FT exon 2821..2863 FT /number=7 FT intron 2864..3110 FT /number=7 FT exon 3111..3178 FT /number=8 FT intron 3179..3259 FT /number=8 FT exon 3260..3344 FT /number=9 FT intron 3345..3699 FT /number=9 FT exon 3700..3748 FT /number=10 FT intron 3749..4564 FT /number=10 FT exon 4565..4637 FT /number=11 FT intron 4638..4764 FT /number=11 FT exon 4765..4825 FT /number=12 FT intron 4826..5236 FT /number=12 FT exon 5237..5303 FT /number=13 FT intron 5304..5427 FT /number=13 FT exon 5428..5484 FT /number=14 FT intron 5485..5571 FT /number=14 FT exon 5572..5625 FT /number=15 FT intron 5626..5715 FT /number=15 FT exon 5716..5844 FT /number=16 FT intron 5845..6287 FT /number=16 FT exon 6288..6351 FT /number=17 FT intron 6352..6435 FT /number=17 FT exon 6436..6509 FT /number=18 FT intron 6510..6594 FT /number=18 FT exon 6595..6648 FT /number=19 FT intron 6649..6789 FT /number=19 FT exon 6790..6858 FT /number=20 FT intron 6859..6957 FT /number=20 FT exon 6958..7047 FT /number=21 FT intron 7048..7138 FT /number=21 FT exon 7139..7246 FT /number=22 FT intron 7247..7363 FT /number=22 FT exon 7364..7414 FT /number=23 XX SQ Sequence 8333 BP; 2396 A; 1521 C; 1537 G; 2879 T; 0 other; attaaattcg ctgatttcga ccgttcaaga ttcaatgtat gcaattaatc ctaattaaga 60 tttcggaccg ttcaagattc aatgtatgta attaatagaa attaaaattt cgctgatttc 120 agaccgttca agattcaatg tatgcaatta atcgcagtta aaaattcgct tcaattcaat 180 gtttggagga gagaaacgag acaattttca attcaatata gatgagataa tcaaggcgac 240 ttcaatgcaa tatagagtgg ataatcgaga catctctttc agatttctcc atacatcttt 300 tatataaatt tgttgaagaa caaacgcttg acgcggagcc ggcgaacgaa actaccaggc 360 gatacgggtg actgacagtc tcagtgcaga gccctctcta tctccgacga gatattgccg 420 gtggtcatcg aagccatatc tgttgaagaa cagacgattg acacggatcc gacgaccaaa 480 ggtagtatgc gatacagaca tctaaaattt atttgtgaat ttgcgcaatg gtattttatg 540 gttcaaaatt tccagtcttt cgtttacttt ttcaaatttt aaactgatat tttatttaaa 600 aaatagtgtt ttaacacatt acaaatagtc agtataaatt tcaccaaata ttagtctgtt 660 aattatacat atttgataag tcactgagaa atgcacagta ttcataaatc tgagtggtga 720 tgtgaataga aattacgtag atcccttacg taaatgtaag ttgagtatat aattttagtt 780 aatgaactta caattttttt ggcaaaaaaa taataattta caaatttgtt atttttttat 840 ttgattatta taacaaaatc gttcgaattt gacacctact acctaatccg catattcctc 900 ttccgtgtgc tacgccgcat gccccacacc ctactgcacg tgacgacaaa ctcaacatca 960 ctacacgaaa acaagcgctt ctctccattc gtctccgacc tccgctactt ttatctgctt 1020 ctctgaatcg ccatcaccac cttcttcagg tactttcagt caagaggcgg attaacttta 1080 aatttcattg ctttttatat ggttagcttt ctggcactat ctgttctgtt gttcgatcaa 1140 agaaggcagc tcatctccat tagagcaatc cgaaaatgct gcttttattg ctaatttgat 1200 tgctcaaatg acattgaaga taaatctcaa gttttttttg gaaagagcag atgcaattga 1260 gattccagct cactcttttt gtatacacga tctattgagt gatctctggc actaatttct 1320 tgctgttgtt cttctgaagc gatttatttc aagtctaatg gcttcgccag ctttgatcag 1380 cgaaactgag gcatggaagg atttgaaggt atgtattttc ttttagtctg ggacactagc 1440 tcggctagta atggcttgca gcaaatttga accccataat gaacctgcag gctcatctcg 1500 agggcataaa aaggactcat ctgcgggaat taatgggaga cactgaaaga tgccagtcaa 1560 tgatggtgta tgtatttttc acggactgag ctctgttatt gtttccttct cttcttgtag 1620 ggtgaagcga attaaactac aatctgtaat gaataattca gttctgtatg cagtcccgtg 1680 cctgttttaa gcttatcgtg tatctgttta ctgttgtagt gagttcgaca acatattctt 1740 ggactactca cggcagcaag ccattcctga cacaattaaa aagctctaca agctagcaga 1800 tgtaagcacc tctctgttgc tagttcagta ctgatcatgt gttaaaaggg caacatttcc 1860 ctgatgttga cttgatcttt tacaggcagc acatctcaag cagaagattg accgcatgta 1920 taatggtgac catgtaagtt ttgactaatt attgctgatc tggtccatct gctttttgtt 1980 ttgctttgat ttgcagctgc tacgtgctga ccagtgtaac cactgtctct ttagctgtca 2040 agtttgattt gttccttaga tatcatggga aatacaactt gtattgctcc ttccgcctct 2100 tgacagcttg gcatatccat tttccttgaa ttttaagagt gaaagatatg cctttctcta 2160 agtaaatgta aaaattaagt atcagtttaa actggctata ttgttttaaa tcttttacta 2220 gaactacggg agtgatggaa aagttgggct gctgctctta tatattcaaa acctgttaat 2280 aaaatagctt tccttggcct ggcagattaa cagtacagaa aacaggtcgg tactacatgt 2340 cgctctccga gctccaaggg attcagctat atgcagtgat ggaaagaatg tggttccaga 2400 tgtttggaat gtacttgaca agatcaaaga cttctcagat agagttcgca atggttcatg 2460 ggtaaaatac agctcctaga gtcctagttg aattttatta gggattttaa gttccgaaat 2520 cattgagtta atctaatctc taataattga ccacatttgg tagatcgggg ccacagggaa 2580 agaactcaag gatgttattg ctgttggtat tggtggcagc ttcctcggtc ctttgtttgt 2640 ccacacagca cttcaaacag gtaccgtatc acacacttat agtgcttaac tgtttgatta 2700 tcttttattt tgtttgtctt ctttgattca actgtaccat ctaatttttg aaaggctctt 2760 ccatttttgg gtttaaaaat gaatacaagt tcatacctta tactttatgg aaacttgcag 2820 atccagaggc cagtaagaat gctagaggcc gtgagctgcg tttgtaagtc tcagctactg 2880 tcaatgcatc attattttct tctttgtggt ttccatgatt attaactata gaactaaatg 2940 gatattaaag gtcagaggaa ggaaaagagg aaaagccata atgttcagtt gaccaattat 3000 catatcctct ttgctaatat actctttgag ctccctttga aaataatggc atgcacagtc 3060 atccaagcgt acttaaaatt gagtattttc ctattattct gtttgtgcag tctggcaaat 3120 gttgatccta ttgacgttgc aaggaacatc tccggtttaa acccagaaac tacccttggt 3180 aattgtctat ctcgttatgc tggttttagg tatcgtttct attttggctt ttgtttgatg 3240 atcttaatct tacctgcagt tgtcgttgtt tcaaagactt ttacaacagc agaaactatg 3300 ctcaatgctc gaactttgag ggaatggata tcttctgctc tcgggtttgt cttcagactg 3360 ctaatttttt tggtagcttt tacataatta cgaagcagac tagtacaaga ttcaggacca 3420 tgatataact tttggcaatt ctggaagcga aatgatttag attttcagta tgcaacttca 3480 tccatgcagc tatggcaatc ccatagctgc aacattatag aaaacagcta gaaacttctg 3540 cagatattgt tgtccagtat cttaataaat cactactagt ttttcttagt attgcactat 3600 tgaaatttca gatgcgccta ctgatatatc ccaactttta acattaaaag aagatatatg 3660 ctctctctct gaccaaagtc attaaaatgt tggttacagc cctactgccg ttgcaaagca 3720 catggttgca gttagtacaa atattccggt atgatttgct ctttcatata ttattttctt 3780 gacatccttc aggtctaatt tttactagta ttctccaatt ataagcacat gtgttatgac 3840 cctaggatcg aatcaatggg cgatagatag gatagatgat ggatagtggg ctcataaggg 3900 gagctctaac cctaaacctg aatttctgaa taataggaga tttagagatt tagagttttt 3960 gattaacttt ctacttgtct cttattcaat aactgcgtcc cttatatagg actagaccag 4020 tacaatctaa atgttatgat attctaacag ataataatag taaaataata tctaactata 4080 tcactaataa tagatataat ataactaaat ctatcactaa catcaatcct aataataata 4140 gatatcatca tatattggat atatttatac ataacaacat gtctatcttg ttattatatg 4200 ctttgaatct tcttgacgcc tcttcaaata agccagcatt ggaacttaga aagaatgatt 4260 tattcaagca tctctttctg cacataatta attaaatttt ccataggaaa ttagattttc 4320 ttttttgatg aagtaaattc tctgactgct cagattgtat atgataggcc tatcaccatg 4380 tatattattt atgctaaata tcggaagcag tatccgtcta gctatgcagt ttcatttggt 4440 gagctggtag actattgaga ttcgacattc tacgattagt taggtggact atcagggggt 4500 gtttacccaa taatttctgt gatggagctg gtacttacct ggctcttgta tgcttcttct 4560 gcagcttgtt gaaaagtttg gcattgatcc taacaatgct tttgcattct gggattgggt 4620 tggtggccga tatagcggta agctatcctt ttttttctta atcccataga tttaattcaa 4680 ataattttgc atggatcgat tgagctattc cttgtgtctc ccctgtggaa tacttatata 4740 tttacatcta tattcttgtg gcagtctgta gtgctgttgg agtgttgcca ttatctcttc 4800 agtatggctt tgctgttgtg gagaagtatg taaacctatc atttcacaca taatatcaat 4860 tttcttctgg ctttccatgt cgtcaataca tccaatcgct tccattgaca tttaattatc 4920 attttctgga aagcttctgg aagttccaaa agataagaat atgtttggta atatatacat 4980 gtatatacta tatatattct ggaaacactc ttctgcagtg aaatacatga acaaattaac 5040 aaacatcgga gtagtgtaga catttctgga gtagatgcct tgtagtaaat tgcatggtag 5100 agagcaggaa aattgtttgt cctcttcgaa aagtatagtt cctatatgct gcttactatt 5160 atggagttta ctaaaaagtt taataagtgg tcatagggct ctcttataaa taaaatattg 5220 tgaattgctt ttgaagattc ttgcaagggg ctcacagcat tgatcagcac ttctcctctg 5280 cgccatttga gaaaaatata cctgtaagtt ccattgatac acttctatga cagtgctagg 5340 atgcacaagt tgatgtttag ctatttcggc cataccctct tttataagtt tgatgacaaa 5400 tttaaattga ttgagtcctt aatacaggta cttctaggtt tgttgagtgt atggaatgta 5460 tcatttctag gataccctgc aagggtgagt tcacatgata tgcttgcggc attattatct 5520 ccattttagt agtctttaat ccactccact gaagcaatca attctttcta ggccatctta 5580 ccatactccc aagcactgga gaaattggct ccacatatac aacaggtatg ctagtgatca 5640 catttctttc ttagtaataa ttatcttgga actggaatga atctagcttt gtctcttcgt 5700 gatgtgactt tacaggtcag catggagagc aacggcaagg gtgtgtccat agatggtttg 5760 cctcttccct ttgagtctgg tgaaattgac tttggtgaac caggtacaaa tgggcagcac 5820 agtttttacc agctgattca ccaggtaact tccttactat ctcaggttgt cacatttcac 5880 ttctgccata ttatccttga attattctat ttcatccaga attaagatac taatatagga 5940 atatcttcta ttctattatc tccccgtatg ggcattgtgg actgtgtcca ttttattctc 6000 aactaatttt gaactaaaac ttcaaaaaaa ttccctttga gcaaaaaaac tactacagag 6060 atctggacct ttcaccatgc tcacaagcca attgcaagtg agttgtgttc ttgtttagcc 6120 aactcccttc tcatcctata tgtgattaga actacaactc actgttcaat gatttcttca 6180 aaatgttcag ctgcctcaaa tacatttctt caataattta tttgaggttg aatttaagca 6240 aagtccactg agtttctgtt tgctaacaca tgcatcttga ataacagggc cgtgtcattc 6300 cctgcgattt tatcggggtc gtgaagagcc agcaacctgt ttacctcaaa ggtgaaaatt 6360 gcacctggag ctagctatat tctaacaagg ctttatattc ctacactaca tcagttattt 6420 ccacttttcc tgcaggtgaa gtggtaaaca accatgatga actgatgtcc aatttttttg 6480 cacagcctga tgctttggca tatggcaagg taactcctaa tccatctgcg atagctttca 6540 aatccgctct ttcaaattac catgaaactt aactgcatac aattgttgct ttagacccca 6600 gaacagctaa agaatgagaa tgttgcagag catcttattc ctcacaaggt attactctga 6660 tttggggaat tcaacatctt attcctcgtc aagcttatat taattaatta attaattgtt 6720 gtgtcaacat cttattcctc gtcaagctta tattaattaa ttaattaatt gttgtgtcat 6780 attatgcaga cattcactgg taacaggcca tctcttagca ttctgcttcc aacattggat 6840 gcttaccgta ttggacaggt ctgtttgttg tgcttcaaaa tataacctcc cgaaacattt 6900 ccttttagaa atagttgtct aatcaactga atggtgtgtt actgtttcca ctctcagctg 6960 ttggctattt atgaacatag agttgcagtg caaggtttcg tatggggcat caactcattt 7020 gaccagtggg gagtggagct aggaaaggtg gagtaccacc tcttcgccat tcaaaatacg 7080 gttcttcgca ataactaagc tttgtttcct tttggtctta atctgttatt tgttgcagtc 7140 tttggcaaca caagtccgga agcaactcca tggatctcga gtgaagggag aacctgtgga 7200 gggtttcaac ttcagcacta aaaccttgtt aacaaaatac cttgaggtat ttatctggct 7260 aaacgaaaca cgcctagtct ttctttgctg ctacattaac atgaacatat cagatgaatc 7320 taaatgtagt taactaagca taatcgtatt ttctcatgta caggcaactt ctgatgtccc 7380 tgctgatcct tccaccctgc tgcctaacat atgaataggc catttttttg ttgaagacgg 7440 atgttatccg tagagttgtg atcttatttt gcctttctgg gttctaattg ctgttcttaa 7500 tatgcaacta cactgcagca atctcttgac tctcttgtat ctggaatcca atacctttgg 7560 gtttgtatgg attcttaacc atcaataata atagaagaga ggatattatt attaatttac 7620 taataattgt tttatgtggg agctggtatg ctaagagcta actgagtctt tctattatgt 7680 ttcacaagca tcatacttgt agtatttttt tttacatttt tttattaccc taaatgtgaa 7740 cctatagagg aattgacaac aataatggtg tgatacaaat tttaggtgta gctaaaaaaa 7800 atcatacttt taaagtttta tctatgtttc aattaactcc ccctagtatt aaagagagca 7860 tgtgcttgtg aagcatgcta aaaaatcttg agctaaccac tcttaattct ctcctgttct 7920 gatttttttg gtacatttgg tgtttacact aaaataatac aagtttgtgg tgaatctgaa 7980 taagatgtgg ttttggttaa aaaagaaaaa gaaaaagatg tggtggtgtg atatgtatgc 8040 gcttaagatg attcgacact cggaaattcg gggccagcag gtgctggagg tgttctccgt 8100 aacgagtttg gtggttgggt aaagggtttt caaagaaagt tgggagtctc taatagccta 8160 gttgctgagt tgtgggcaat tagagatggt ttggttatgg ctaaaaactt aagcattgtt 8220 tctattgatg ttgaagcaaa taaagtgtga accttattgt agaaatgaaa atgaagatag 8280 atcactaatg ccttgtaggt ttcttttaaa gtcttttcga agaggtagga tcc 8333 // |
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