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EBI DbfetchID X89387; SV 1; linear; genomic DNA; STD; PLN; 8728 BP. XX AC X89387; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.xantiana PgiC2 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC2 gene. XX OS Clarkia xantiana OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-8728 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX CC Related sequence X80667 XX FH Key Location/Qualifiers FH FT source 1..8728 FT /organism="Clarkia xantiana" FT /sub_species="parviflora" FT /strain="population LDG 7436" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="X28, X2" FT /db_xref="taxon:3938" FT CDS join(1155..1205,1288..1364,1519..1600,1684..1731, FT 2131..2286,2381..2477,2645..2687,2928..2995,3077..3161, FT 3489..3537,4003..4075,4173..4233,4413..4479,4603..4659, FT 4738..4791,4882..5010,5422..5485,5570..5643,5711..5764, FT 5845..5913,6048..6137,6219..6329,6580..6630) FT /gene="PgiC2" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54242" FT /db_xref="HSSP:1GZD" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54242" FT /protein_id="CAA61567.1" FT /translation="MATPSLISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGVSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKKENVSEH FT LIPHKTFTGNRPSLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEEGFNFSTKTLLTRYLEATSDVPADPSTLLPKI" FT exon 1155..1205 FT /number=1 FT intron 1206..1287 FT /number=1 FT exon 1288..1364 FT /number=2 FT intron 1365..1518 FT /number=2 FT exon 1519..1600 FT /number=3 FT intron 1601..1683 FT /number=3 FT exon 1684..1731 FT /number=4 FT intron 1732..2130 FT /number=4 FT exon 2131..2286 FT /number=5 FT intron 2287..2380 FT /number=5 FT exon 2381..2477 FT /number=6 FT intron 2478..2644 FT /number=6 FT exon 2645..2687 FT /number=7 FT intron 2688..2927 FT /number=7 FT exon 2928..2995 FT /number=8 FT intron 2996..3076 FT /number=8 FT exon 3077..3161 FT /number=9 FT intron 3162..3488 FT /number=9 FT exon 3489..3537 FT /number=10 FT intron 3538..4002 FT /number=10 FT exon 4003..4075 FT /number=11 FT intron 4076..4172 FT /number=11 FT exon 4173..4233 FT /number=12 FT intron 4234..4412 FT /number=12 FT exon 4413..4479 FT /number=13 FT intron 4480..4602 FT /number=13 FT exon 4603..4659 FT /number=14 FT intron 4660..4737 FT /number=14 FT exon 4738..4791 FT /number=15 FT intron 4792..4881 FT /number=15 FT exon 4882..5010 FT /number=16 FT intron 5011..5421 FT /number=16 FT exon 5422..5485 FT /number=17 FT intron 5486..5569 FT /number=17 FT exon 5570..5643 FT /number=18 FT intron 5644..5710 FT /number=18 FT exon 5711..5764 FT /number=19 FT intron 5765..5844 FT /number=19 FT exon 5845..5913 FT /number=20 FT intron 5914..6047 FT /number=20 FT exon 6048..6137 FT /number=21 FT intron 6138..6218 FT /number=21 FT exon 6219..6329 FT /number=22 FT intron 6330..6579 FT /number=22 FT exon 6580..6630 FT /number=23 XX SQ Sequence 8728 BP; 2410 A; 1734 C; 1678 G; 2906 T; 0 other; gaattcgtaa accccataaa agaaaaatat tgaatataaa aatatatgtc aaaattctaa 60 cgataagtac aatctagaaa aaaaaatggg tatgggatct gaatatgtgt gtcaactatg 120 gatggcaacg ggtcacgggg ccccgacccg gtttagaccc gccgacccgc cccgaagttc 180 ctaatatata tatatatatt atgttaatat gatgtaacat ttactaaaca atatggttat 240 agtacctata taaataatat ggaccaaatt ataaatatat gtatatttag attattagga 300 tttggatttg gtgtttggat ttgaatttga attttgtgat gaatttgatg tgtttgtttt 360 ttgtatttga ttggtgttag atttatggtt tgaatttata cataatgtaa tattttggca 420 aaaaactata tttaatattg agaagtaaaa aaaaaaagtt tgttcacacg gcggggcgga 480 tcggggaccc gcaggttttt tttacccgcc cgccccgggt tgtacaattg ttcgggcccg 540 gggctgcgaa aacccgccct gacccgcccg ttgccatcag tgtcaattgt caacccgata 600 ttattattat tagtaggtgt gaccgcgaat aaattcgtaa ttaacatcat ctttattacg 660 tacgagcttg tcagctgatc cgcacgcaca tctttctcct ctgtgtgcta cgccgcatgc 720 accacacccc ctcctgcacg tgtcgacaat ctcttctttc gtctccgaag tccgacctcc 780 gctactttcc gctgcttctc tgaatctcct cagcttcttc caccaatcgc catcaccacc 840 ttcttcaggt aggtactctc actcattttg ggtttaactt caactacgca tctcaacttt 900 catcgctttt tatttggcta tcatcattat tagctttctg gcactatttt ttccgctgtt 960 cgatcaaaga acccagctca tctccattag agcaatccga aatttcttct tttattgcta 1020 atttgattgc tcaaatgaca ttgaagataa atctaaagta tttttggaaa gagcagatgc 1080 aattgagagt ccagctcatt cgttggcact aatttcttgc cgttgttctt ctttagcgat 1140 ttagtgcaag tccaatggct acaccatctc tgatcagcga aactgaggca tggaaggatt 1200 tgaaggtatg tatttgcttt tagtcttgga cactagctcg gttagtaatg gctggctgca 1260 aatctgaacc tcataatgca cttacaggct catctcgagg gcataaaaag gactcatctg 1320 agggaattaa tgggagacac tgaaagatgc cagtcaatga tggtgtaagt atttttcatg 1380 gactgagctc tgctattgtt tccttctctc tttcagtagg gtgaatcgag ttaaactaca 1440 atctctaatg aataagccca gttctgtatg cactccagtg cctattttaa gctttgcgtt 1500 atctgtttac tgttgtagtg agttcgacaa catattcttg gactactcgc ggcagcaagc 1560 ctctcctgac acaattaata aactctacaa actagcagaa gtaagcacct ctctgttgct 1620 agtccagcac tgatcatctg ttaaaaggca acattttcct gatgttggct ttatcttttc 1680 caggcagcac atctcaagca gaagattgac cgcatgtata atggagacca tgtaagtttt 1740 gactaattat tgatctagcc tatctacttt ttgctttgat ttgtagctgt taagtgctga 1800 ccagtgtaac cactgtctat ctagcagtcg attttggttt gttcattaga tatcgtggga 1860 aatacaactc atattgatcc tttcacctgg attctggtaa attgtatcca acatgacaga 1920 tccatttttc ttggattttt agggtgaaag atatgcctat ctcaaaataa atgtaaatat 1980 taagtatctg tctaaactag ctgctatata tatatatata tatatatatt ttttaatatt 2040 ttactagaac caagggagtg atgggatagt tggaccgttg ctcttatctt ttcaaacctg 2100 ttaataaaac agctttcctt ggcttggcag attaacagta cggaaaacag gtcggtacta 2160 catgtcgctc ttcgagctcc aaggaattca gctatatgca gtgatggaaa gaatgtggtt 2220 ccagatgttt ggaatgtact tgacaagatc aaagacttct cagagagagt tcgcaatggt 2280 tcatgggtaa aatacagctc ccagttgaat ttggttagga tatttaaggt ccaaaatcac 2340 tgagttcttc taatctccaa taagtgatca cacttggtag gtcggggcca cagggaaaga 2400 actcaaggat gttattgctg ttggtattgg tggtagcttc cttggtcctt tgtttgtcca 2460 cacagcactt caaacaggta ccgtgtttga cacttatgat gcttagctgg ttaattatct 2520 ttcatttgtg gtctaaagat ggtagctaga ttcaactgta gcatctaatt cttgaaaggg 2580 ttttccattg ttgggtttaa aaatgagtac gagttcataa catatagttt gtggaaactt 2640 gcagatccag aagccagtaa gaatgctaga ggccgggagc tgcgtttgta agtctcagct 2700 atgcatcgtt cttttcttct ttgcggtttc cgtgattaat aactatagac taaatggata 2760 ttaatggtca gaggaaataa aggaggaaaa gccataatgt tcaaatgacc aatcttcata 2820 tcctttttga gttccctttg aaaataatgg catacacagg catccaggca tacttaaaac 2880 tgactatttt tgtaatggaa gattgaccga ttattctgtt tgtacagtct ggcaaatgtt 2940 gaccctattg acgctgcaag gaacatctcg ggtttaaacc cagaaactac acttggtaat 3000 tgtctttctc attatgctgg ttttaggtat cgtctttctt ttgccttttg tttgacgatc 3060 ttaatcttac ctgcagttgt cgttgtttca aagactttta caacagccga aactatgctc 3120 aatgctcgaa ctttgaggga atggatatct tctgctcttg ggtttgtcta atactgctaa 3180 ctttttggta gctttaatta caagattcag taccacaata taatttttgg caatctggaa 3240 gagaaaggat ttagattttc agtatgcaat ttcatccatg cagctaaggc aataccattg 3300 ctgcaacaat atagaaaaca gtttagaaac ttctgcatca gtatctcaat aaattgctac 3360 tattttttct tagtattgca ctattgaaat tttgagatgc acttactgat atatcctaac 3420 cttcttttaa ctttaagaaa aggtatatgc tctctctctg accaaagtca ttaaaatgct 3480 ggttacagcg tttctgccgt tgcaaagcac atggttgcag ttagtacaaa tcttccggta 3540 tgattttctc tttcttatat tattttcttg atatccttca gttctaattt ttactggtat 3600 tctccaataa taggcacatg tgtatcttgt tattatatga tttgaatctt ctcgacgctc 3660 ttcaaataag tcagcatggg aacttaaaaa gaatgattta ttcaagcatc tttatgcact 3720 tacttaattg aactgtccat agcaaagtag gatttcttgt ttcatgaaga aaattctctg 3780 actgctcata ttgtatatgg taggcctatc cccatgtata ttatttttat gctaaatatc 3840 aggagcacta tatgtgtcta gctatgcagt ttcatttgat gagctgttag actattgaga 3900 tttgacactc tatgattagt tatgtggact atcaggggtt tacccaataa tttctgtgat 3960 ggagctcgtt acttacctag atctcttatg cttcttctgc agcttgttga aaagtttggc 4020 atcgatccta acaacgcttt tgcattttgg gattgggttg gtggccgata tagtggtaag 4080 ctatccattt tttcttaatc ccacggattc aatccaatta atttccctat ggtgccaata 4140 cttatatatt tacatctata ttcttgtggc agtctgtagt gctgttggag tgttgccatt 4200 atctcttcag tatggctttg ctgttgtgga gaagtatgta aacctatcat ttcacacata 4260 tcaattttcc tctggttttc catgtaatct tcgaaaatat agttcatata tgctgcttac 4320 tattatggat tttactagct tttcatcaca aaagtttatt tagtggtcat aaggctctct 4380 tataattcaa atgttgtaaa ttgtttatga aggttcttgc aaggggctca cagcattgat 4440 cagcacttct cctctgcgcc atttgagaaa aatatacctg taagttccca ctagatacac 4500 tctagtaatg agtggatgca cgagctgatg tttagttatt tctgccgtac cttcttttac 4560 aagtttgatg ataaacttga atttattgaa tctttaatac aggtacttct aggtttgtta 4620 agtgtatgga atgtatcatt tcttggatac cctgcaaggg tgagttcaca tgatatgcct 4680 aaggcataat atcctttatt aagtagccac tccactgaag caatcaattc tttttaggcc 4740 atcttaccat actcccaagc attggagaaa ttggctccac atatacaaca ggtatgctag 4800 tgatcacatt tctttcttag taataattat cttcgaattg tattgaagtt atctttgtcg 4860 ctttgcgatg tgaatttaca ggtcagcatg gagagcaacg gcaagggtgt gtccatagat 4920 ggtttgcctc ttccctttga gtctggtgaa attgactttg gtgaaccagg tacaaatggg 4980 cagcacagtt tttaccagtt gattcaccag gtaacttcct tactatctca tgtagttact 5040 atcacatgtg ccatattcta tttcatccag aataccttgt ttccattatc ccccccgggt 5100 atgtgcattg tggaccgtgt ccattttatt ctcagctaat tttgaaccaa aacttaaaag 5160 aaaaatccct ttaagcaaac aaactcctac aaaggtatgg acctttcacc atgctcacaa 5220 gccaatagcg agttgtgttc ttgtttagcc agctcccttc tcatcctata tgtgattagg 5280 attactactc aaattcactc tttaatgatt acttcaaaat gttcagctgc acaaatccat 5340 atcttcacta ttttagttga ggtcaaatta agcaaagtcc accgagtttc tgtttcctaa 5400 cacgtgcatc ttgaataaca gggccgtgtg attccctgtg attttatcgg ggtcgtgaag 5460 agccagcaac ctgtttacct taaaggttaa aattgcagct ggagatagct atatttctaa 5520 tgaggcttta tatcctacac tacatcagtt atttccactt ttcctacagg tgaagtggtt 5580 aataaccatg atgaactgat gtccaatttt tttgcccagc ctgatgcttt ggcatatggc 5640 aaggtaactc ctaatccatc tgtgctttca aattaccatg aaacttaact gcatacaatt 5700 gttgctttag accccggaac agctaaagaa ggagaatgtt tcagagcatc ttattcctca 5760 caaggtatca ctctgatttg cggaattcaa catcttaatc ctcgtcaagc ttatattaat 5820 taattgttgt gtcatattat gcagacattc actggtaata ggccatctct tagcattctg 5880 cttccaacat tggatgctta ccgtattgga caggtctgaa tgtctgttct gctacgaaat 5940 attacctctc ctgattcccg atacgtttcc ttttagaaat agtgtttaat ctatttggtg 6000 aggatagata ctgaatggtg tgttactgtt tctttccgca ctgtcagctg ttggcaattt 6060 atgaacatag agttgcagtg caaggtttcg tatggggcat caactcattt gaccagtggg 6120 gggtggagtt aggaaaggtg aagtgccatt caaaatgcgg gttctttgca ataacttggc 6180 ttcattttgt tttggtctta atctgttatt tgttgcagtc tctggcaaca caagtccgaa 6240 agcaactcca tgcatctcga gtcaagggag aacctgtgga ggagggcttc aacttcagca 6300 ctaaaacctt gttaacaaga tacctcgagg tatttatctg gctaaaccaa aacacaccta 6360 gtctttcttg gattcagatc tcctgaccaa ctcttcgtgc cccagatcgt gccttactta 6420 aaacacgtgt caagatctta acagtgaggt actatctggg gcatggagag tggggcagga 6480 gatctgcatc cgtctttctt tgctgattac attaacatga acatatgaga tgaatataaa 6540 tgtagggaat taagcgtaat cttattcttt tgtgttcagg caacttctga tgtccctgct 6600 gatccttcaa ccctgctgcc taagatatga ataggttgct tttcgacttt ttgaagacgg 6660 atgttatccg tagagttgtg atctcttttg cctttctggg ttctagttgc tgttattaat 6720 atgcaactac actgcagcaa tatccgactc tcttgtatct ggaaaccaat acatttgggt 6780 ttgtttgaat tctcttaatc aataataaat aactagatat gtgatcttga cgatcataca 6840 tgacatgatt aacccgactc ctagtacgag gtgattatta atttaataat atctgtttta 6900 tgaaggagtc ggtatgctaa ggagtaagag ctaaccactt aataataatc ctctcctgtt 6960 ctgattattg ggcacactta cactaaatta agggttaata acctatgaaa ggtatgaagt 7020 ttgacccatg ttaaccagag aggtctgaat ttcaaaagtt aatatgaaat gtctgaattt 7080 tcaaatttgt tgatataaga agtttccgtt aattttttcc gttaaaactg acgaaattgg 7140 tcacgtgcct tggccatgtg accggaaata aaataaaatc caaaaaatgt cattctatca 7200 taatatgccc ctcacatgct tgaaatgaaa agacgaaaat gctcactcac atgcttgaaa 7260 tgaaaatgcc ccaatcgtgg ctaccacccg cggccgccga ccaccacccg cggccgccga 7320 ccaccaccca aggccgacga cgaacaccac ccaaggccgc cgacgaccac caatcgggcc 7380 ggccaccacc aatttcgccg gggccaccca aataagtggt ggccggtccc gattggtgtg 7440 ccgccgccac ccaattgggg ctggccggcc acgatttggt ggtcggcccg attggtggtt 7500 ttcgtcggcc ttggttgctg accccaattg gctgccggcc ccgattggga tggctgctgg 7560 tcccaattag ggctgctggc cccgattggt ggtcgtcgtc gggattgggt ggtggtcgtc 7620 gtcctcgggt tgtggccggt ggacttgtgc ggtgacggag aaaacaatag ggaatcaatt 7680 gtaaaaatca aaacttaaga atataaattt gaggactaaa ttgaacaaaa taaaaaaata 7740 gggactcaat tcttaatttg acgtcggtgg taattttgtc atttcacatt tcctcaatta 7800 aggtattaaa taaaacaaaa tattaaaatg ggcaaaagtg tcatttcaga ccattctatt 7860 aaatttaacc ctaaaaatgg acggaaaatc aaatattaac aaaattgaaa attcagacat 7920 tccatattaa cttttaaaac ttcagacctc tccgattagt atgggcaaac ttcagacctt 7980 tcataagtta ttacattgaa cttattttta tacaccgtat cattatttat taattttttt 8040 tttttttgcc aacaaaagga atgacctagt agtgacgacc ctaggcccat cccgctacgt 8100 aatgttcgag ctttcctgtt cacagtctag gtttttttcc gatcagattt agcgagcaac 8160 cagcgcatgc actgacctcg tcaacgtagc cccaccaaca acctagtata gtcaagaagc 8220 cggcccgtgc ccagttctac tcgcctcctt atatgcctga cgcgatgtgt ggtcaagtta 8280 attagtcgta aactatgtat atgatgggat tcacgtaaaa ctaattattt gaatgattgt 8340 agcgtacttg gatgttttgt tttttttcct aaaaaatgaa tgtgctagta gcagcgtttt 8400 taaacacatc tcaatatgta atgtaagagc tcttttgctc acggtctaag ttttttcccg 8460 atcagactta gcgagcaacc agcgcatgca ctgactttgt caacacaatc tcaacaacag 8520 tctagtatag tcgagcaagc ccgtgcgtta caaaattata aatgctttat ttttgtattt 8580 gagtattaca aaaatcgatt gttaccatcc tttggttgga ggaccgtgat aaattttttg 8640 cagatgattc tgtccatcgt ttcaaactta agagttattt tgtaactgtg atcttttgca 8700 cttccctact atacttaccc cttctaga 8728 // |
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