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EBI DbfetchID X89386; SV 1; linear; genomic DNA; STD; PLN; 8251 BP. XX AC X89386; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.xantiana PgiC1 gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC1 gene. XX OS Clarkia xantiana OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-8251 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX CC Related sequence X80666 XX FH Key Location/Qualifiers FH FT source 1..8251 FT /organism="Clarkia xantiana" FT /sub_species="parviflora" FT /strain="population LDG 7436" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="X6" FT /db_xref="taxon:3938" FT CDS join(1574..1624,1707..1783,1936..2017,2102..2149, FT 2522..2677,2780..2876,3039..3081,3321..3388,3468..3552, FT 3918..3966,4433..4505,4633..4693,5085..5151,5282..5338, FT 5426..5479,5571..5699,6156..6219,6304..6377,6470..6523, FT 6607..6675,6819..6908,6992..7099,7191..7241) FT /gene="PgiC1" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P54240" FT /db_xref="HSSP:1HM5" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54240" FT /protein_id="CAA61566.1" FT /translation="MASPALISETEAWKDLKAHLEGIKMIHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTISKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGIVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKNENVSEH FT LIPHKTFTGNRPSISILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI" FT exon 1574..1624 FT /number=1 FT intron 1625..1706 FT /number=1 FT exon 1707..1783 FT /number=2 FT intron 1784..1935 FT /number=2 FT exon 1936..2017 FT /number=3 FT intron 2018..2101 FT /number=3 FT exon 2102..2149 FT /number=4 FT intron 2150..2521 FT /number=4 FT exon 2522..2677 FT /number=5 FT intron 2678..2779 FT /number=5 FT exon 2780..2876 FT /number=6 FT intron 2877..3038 FT /number=6 FT exon 3039..3081 FT /number=7 FT intron 3082..3320 FT /number=7 FT exon 3321..3388 FT /number=8 FT intron 3389..3467 FT /number=8 FT exon 3468..3552 FT /number=9 FT intron 3553..3917 FT /number=9 FT exon 3918..3966 FT /number=10 FT intron 3967..4432 FT /number=10 FT exon 4433..4505 FT /number=11 FT intron 4506..4632 FT /number=11 FT exon 4633..4693 FT /number=12 FT intron 4694..5084 FT /number=12 FT exon 5085..5151 FT /number=13 FT intron 5152..5281 FT /number=13 FT exon 5282..5338 FT /number=14 FT intron 5339..5425 FT /number=14 FT exon 5426..5479 FT /number=15 FT intron 5480..5570 FT /number=15 FT exon 5571..5699 FT /number=16 FT intron 5700..6155 FT /number=16 FT exon 6156..6219 FT /number=17 FT intron 6220..6303 FT /number=17 FT exon 6304..6377 FT /number=18 FT intron 6378..6469 FT /number=18 FT exon 6470..6523 FT /number=19 FT intron 6524..6606 FT /number=19 FT exon 6607..6675 FT /number=20 FT intron 6676..6818 FT /number=20 FT exon 6819..6908 FT /number=21 FT intron 6909..6991 FT /number=21 FT exon 6992..7099 FT /number=22 FT intron 7100..7190 FT /number=22 FT exon 7191..7241 FT /number=23 XX SQ Sequence 8251 BP; 2296 A; 1600 C; 1540 G; 2815 T; 0 other; gggtaaatat caaaatagtt gggtagtgct acactctttt agcaaataac tagccgaact 60 ttatcgaaag tacaatttag ctctattatt tttttttttt ttgtgaaaat ctaaataaat 120 tcacgtgaag agtacgtgaa cgactgaaat tggtgacaac atacttcgtc tttagaatat 180 acttgcaatt tttcttggtc gaaaatgccc attttctatt gaaatcattc aaccatattt 240 tctatgaatc gttttgctca attcggcctc tattcttgaa tgagtagttc tctgcagtcg 300 ttggcaatga gggtgtatga cgtgtggact tttgttggtt atgcatcatc atgtgctact 360 tcttaggggt gagctcggga cgggacgggc gggcttttgc ctgagcccga gcccgaaaat 420 ttcgggactc atatttttgg ctcgagcccg agcccgagcc cgaacctaaa ggaaatgtcc 480 cgcccgagtc ggacatcggg attcgggctc gggctcgggc tagcccgaat ttgaaccaaa 540 aaattaaaaa aaaaaaaaaa aatcataata tgaggtccat ccatttcaaa tacatgcaag 600 ttcaacacat caatacaaaa ttcaataatt tcaaacatca tccatagtct aattctaaga 660 tttttttatt ttaactatag taaagttact taaactatag ttagtagact taggttaaac 720 ttaaatatat ataatatata catatattcg ggcgggctcg ggactttcgg gctttttaag 780 aaaaagcccg agcccgagcc cgagcccgac ttgggaaaaa aaatcccaac cgggctcggg 840 ctacatctcg ggacgggatt ttcgggacgg gctcgggtcg ggattttcgg gcttcgggct 900 tttcgggctt cttgctcagc cctactactt cttacgtgaa gaattctatt agtttttttt 960 ttttttttta aataataata acaagctatc taatagcccg gtaaagttta actagatttt 1020 tctaaaataa aatattagct agctatttgc aattttatta aaaaaaatct agtatttagt 1080 atttagccat ataaaaataa agaaacagac accaatccgg caatccgcat cttcctcttc 1140 tgtgtgctac gccgcatgcc agccccacac cctaccgcac gtgacgacaa actcaacatc 1200 actacacgaa gacaagtgct tctcttcatt cgtctccgaa cttcgctact tttcacctgc 1260 ttctctgaat cgccatcacc actttctcca ggtaatcgca gccattttgt tcaacttcaa 1320 ctacacatct caaatttcat tgctttttat acggttagct ttccggcact atctttcgat 1380 taaaaatgct gcttttattg ctaatttgat tgctcaaatg acattgaaga taaatctaaa 1440 ttatttttgg aaagagcaga tgcaattgag aatgagagtc tagctcactc tttatgtata 1500 catgatctat tgagttatct ctggcactaa tttcttgctg ttgtttcttc tgaagcgatt 1560 tagtgcaagt ctaatggctt cgccagcttt gatcagcgaa actgaggcat ggaaggattt 1620 gaaggtatgt atttgctttt agtctgggac actaactcgg ctagtaatgt ctggctgtaa 1680 atttgaacct cattacgaac ctgcaggctc atctcgaggg cataaaaatg attcatctgc 1740 gggaattaat gggagacact gaaagatgcc agtcgatgat ggtgtatgta tttttcatgg 1800 actgagctct gttattgttt ccttctcttc ttgtagggtg aagcgaatta aactacaatc 1860 tgtaatgaat aattcagttc tgtatgcagt cccgtgccta ttttaagctt tgcgtatatc 1920 tgtttactgt tgtagtgagt tcgacaacat attcttggac tactcacggc agcaagcctc 1980 tcctgataca attagtaagc tctacaagct agcagatgta agcacgtctc tgttgctagt 2040 tcagtactga tcatgtgttt taagggaaac atttccctga tgttgacttg atcttttaca 2100 ggcagctcat ctcaagcaga agattgacag aatgtataat ggtgaccatg taagttttga 2160 ctaattattg ctgatttagt ccatctgcct tttgctttgc tttgatttgc acctgctacg 2220 tgctgaccag tgtaaccact gtctctctag ctgtcaagtt tgatttgttc cttagatatc 2280 atggggaaat ataacttgta ttgctccttc cgcttcttga cagcttggca tatccatttt 2340 cttgaatttt aagagtgaaa tatatgcctt tgtctaagta aatgttaaca ttaagtatca 2400 gtttaaactg gctatattgt ttttaatctt ttactagaac cacgggagtg atagaagagt 2460 tgggctgttg ctcttatata ttcaaaacct gttaataaaa tagctttcct tggcctggca 2520 gattaacagt acagaaaaca ggtcggtact acatgtcgct cttcgagctc caaggaattc 2580 agctatatgc agtgatggaa agaatgtggt tccagatgtt tggaatgtac ttgacaagat 2640 caaagacttc tcagatagag ttcgcaatgg ttcatgggta aaatacagct cctatagtcc 2700 tagttgaatt tgattaggga ttttaagttc cgaaatcatt gagttcatct aatctcgaat 2760 aattgaccac atttggtaga tcggggccac agggaaagaa ctaaaggatg ttattgctgt 2820 tggtattggt ggcagcttcc tcggtcctct gtttgtccac acggcacttc aaacaggtac 2880 cgtatcagac acttataatg atgaactgtg tgattatctt ttatttgtct tctaaagatg 2940 gtagctagat tcaactgtac catctaattc ttgaaaggct cttctattgt tgggtttaaa 3000 aaagagtaga agtttatacc ttttgtggaa acttgcagat ccagaggcca gtaagaatgc 3060 tagaggccgt gagctgcgtt tgtaagtctc agctactgtc aatgcatcgt tattttcttt 3120 tttgtggttt ccatgattat taactgtaga aactaaatgg atattaaagg ccataatgtt 3180 cagttgacaa ttatcatatc ctctttgcga atatactctt tgagctccct ttgaaaatac 3240 tggcatgcac agtcatccaa gcgtacttaa aattgagtat tttctttatg gaagcttgac 3300 ctattattct gtttgtgcag tctggcaaat gttgacccta ttgacgttgc aaggaacatc 3360 tccggtttaa acccagaaac tacccttggt aattgtctct cgttatgctg gttttaggta 3420 tcgtttctat tttggctttt gtttgatgat cttaatcttg cctgcagttg tcgttgtttc 3480 aaagactttt acaacagcag aaacaatgct caatgctcga actttgaggg aatggatatc 3540 ttctgctctc gggtttgtct ccatactgct tacttttttg gtagctttta cataattacg 3600 gagcagacgg gtacaagatt cagtaccata atgtaacttt tggcaattct ggaagctaaa 3660 tgatatagat tttcagtgtg caacttcatc catgcagcta tggcaatccc atagctgcaa 3720 cactagaaaa cagtctagaa acttttgcag atattgttgt ccagtatctt aataaatcac 3780 tactagtttt tcttagtatt gcagcattga aatttcagat gcgcctttga tatatcccaa 3840 cttttaacat taaaagaaga tatattctct ctctctctct ctctctctga tcaaagtcat 3900 tataatgttg gttacagccc ttctgccgtt gcaaagcaca tggttgcagt cagtacaaat 3960 cttccggtat gtttgctctt tcatatattt ttttcttgac atccttcagg tctaattttt 4020 actggtattc tccaattata agcacatgtc tatcttgtta taatatgctt tgaatcttct 4080 tgatgcctct tcaaataagc cagcatggga acttagaaag aatgatttat tcaagcatct 4140 ctttctgcac ataattaatt aaattgtcca taggaagtta ggttttcttt tttgaagaag 4200 taaattctct gactgctcat attgtatatg ataggcctat caccatgtat attatttatg 4260 ctaaatatcg gaagcagtat ctgtctagct atgcagtttc atttggtgag ctggtagact 4320 attgagattc gacattctac gattagttag gtggactatc agggggtgtt tacccaataa 4380 tttctgtgat ggagctgttt acttacctgg atctcgtatg cttcttctgc agcttgttga 4440 aaagtttggc attgatccta acaatgcttt tgcattttgg gattgggttg gtggccgata 4500 tagtggtaag ctatcctttt tttacttaat cccatagact taattcaaat aattttgcat 4560 ggatcgtttg agctattcct tgtgtctccc ctgtggaata cttatatctt tacatctata 4620 ttcttgtggc agtctgtagt gctgttggag tgttgccatt atctcttcag tatggctttg 4680 ctgttgtgga gaagtatgta aacctatcat ttcacacata atatcaattt tcttctggct 4740 ttccatgtcg tcaatacatc caatcgtttc cattgacatt taatttttat tttctggaaa 4800 gcttctggaa gttccaaaag ataaagaata tgtttggtaa aatatacatg tatataatat 4860 atacattctc tggaaacact cttcttcaat ggaatacata aacaattaac aaacaccaga 4920 gaggagtgta gacattttag gagtagatgc cttgtagata gagagcagga aaattgtttg 4980 tcgtcttcga aaagtatagt tcatatatac tgcttactat tatggagttg actaattttt 5040 tttaatgagc ggtcatagta aaatgttgta aattctttat gaagattctt gcaaggggct 5100 cacagcattg atcagcattt ctcttctgca ccatttgaga aaaatatacc tgtaagttcc 5160 attgatacac ttctatttct atagtaatgc ttggatacac aagttgatgt ttagttattt 5220 cagccatacc ttcttttata agtttgatga caaatttgaa ttgattgaat ctttaataca 5280 ggtacttcta ggtttgttga gtgtatggaa tgtatcattt cttggatacc ctgcaagggt 5340 gagttcacat gatatgcttg aggcattatt ttctcctttt tagtagtctt taatccactc 5400 cactgaaata atcgattctt tctaggccat cttaccatac tcccaagcac tggagaaatt 5460 ggctccacat atacaacagg tatgctagcg atcacatttc tttctcagta atgattatct 5520 tggaactgga aacgaagtta gctttgtctc ttcatgatgt gactttacag gtcagcatgg 5580 agagcaacgg caagggtgtg tccatagatg gtttgcctct tccctttgag tctggtgaaa 5640 ttgactttgg tgaaccaggt acaaatgggc agcacagttt ttaccagttg attcaccagg 5700 taacttcctt actatctcag gtagccatgt atcagtttct ccatatttat ccttaaatta 5760 ttctacttca tccagaatta agatactaat ataggaatac cttgtattca attccctcgt 5820 atgtgcattg tggattgtgt ccattttatt ctcagctaat tttgaactaa aacttcaaaa 5880 tttgtccctt caagcaaaaa aaaaaaaaaa aaaaaactac tacaaagatc tggacctttc 5940 accatgctca caagccaatt gcgagttgtg ttcttgttta gccaactccc tttctcatcc 6000 tatatgtgat taggactact actcaaattc accatttgat gatttcttca aaatgttcag 6060 tttcacaaat ccatttcttc actaatttag ttgaggctga attaagcaaa gtccactgaa 6120 tttctgtttg ctaacacacg catcttgaat aacagggccg tgtcattccc tgcgatttta 6180 tcgggatcgt gaagagtcag caacctgttt acctcaaagg tgaaaattgc atctggagct 6240 agttatattt ctaacaaggc tttatattcc tacactacat cagttatttc actatttctg 6300 caggtgaagt ggttaataac catgatgaac tgatgtccaa tttttttgcc cagcctgatg 6360 ctttggcata tggcaaggta actcctaatc catctgcgat agctagcttt caaatccgct 6420 ctttaaaatt accatgaaac ttaactgcat acaattgttg ttgctttaga ccccagaaca 6480 actaaagaat gagaatgttt cagagcatct tattcctcac aaggtattac tctgatttgg 6540 ggaattcaac atcttattcc accatatcaa gcttatatta attaattgtt gtgtcatatt 6600 atgcagacat tcactggtaa taggccatct attagcattc ttcttccaac attggatgct 6660 taccgtattg gacaggtctg tatgtccatc tgtttgttgt gtgcttcaaa ctataacctc 6720 ccttaattcc cgaaacattt ccttttagaa atagttctct aatcaatttg ttgaggatat 6780 agatactgaa tggtgtgtta ctgtttctgc actgtcagct gttggcaatt tatgaacata 6840 gagttgcagt acaaggtttc gtatggggca tcaactcatt tgaccagtgg ggagtggagt 6900 taggaaaggt gaagtaccac tcaaaatacg gttctttgcg ataacttatc ggtttcattt 6960 cgttgtggtc ttaatctgtt atttgttgca gtctctggca acacaagtcc gaaagcaact 7020 ccatgcatct cgagtcaagg gagaacctgt ggagggtttc aacttcagca ctaaaacctt 7080 gttaacaaga tacctcgagg tatttatctg gctaaaccaa acacgcctag tctttctttg 7140 ctgaatctaa atgtagttaa ttaagcttaa tcttattctc tcatgtacag gcaacttccg 7200 atgtccccgc cgatccttcc accctgctgc ctaacatatg aatatgctgc ttttcgattt 7260 tttgaagacg gatagatgtt atccgtagag ttgtgatctt ctttttcctt tctgggcttt 7320 aattgctgtt cataatatga aactatactg cagcaatctc ttcactctct cttgtatctg 7380 gaatccaata cctttggggt tgtatgaatt cttaatcaat aataacagaa gagaggatat 7440 tattcttaat gtaataataa ttgttttatg agggagccgg tatgctaaga gctaaccact 7500 cataatcctc tcctcctgtt ctgatttttg gttacatttg ctgtttacac tataatataa 7560 tagtaataat acaagtttgt ggtgaatatg aataagatgt ggttttggta aaaagaaaaa 7620 aatgtggtgg tgtgatatta ttgtatggac gtaaatgtcc ataatattat cccatagaaa 7680 ccttaaaaat aaattaaatt aagggtaaaa atggtagaaa ataagttgag gtcagcaatc 7740 cagaaagtta ttttttttgg ccactcaatc cagaaagatt agggaacaca ctgctacata 7800 ataaatatct atggcgcaaa tgaacaaatg gtataagtta agggtgccac gtttaggtgt 7860 tttggcgaaa aatatcaaaa gtcaaccgcc agttactaac gtgcgccgtc ggaagcaact 7920 cgttagcctg cgccacgcca tagcccttaa taaagcctat cttttttatt caccgcttct 7980 ccttcccccg ctcaaacgca accaggagaa ggattagggt ttttctgcga gcgcctctct 8040 gtaacctcaa ccgatcatca atggctcata gcactggtta cacttctcgc tctctcctct 8100 ccgaagatcc cccgctgcac cagatcccca aaggtgctcc ctccccggca atactctctc 8160 tctctctccc ccaacagaaa aaaaattgaa atttgatcta ttggtcggat gtttgaattt 8220 gcgtctcttc agtctgctaa cgctcggagg a 8251 // |
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