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EBI DbfetchID X89385; SV 1; linear; genomic DNA; STD; PLN; 9359 BP. XX AC X89385; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.lewisii PgiC2-a gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC2-a gene. XX OS Clarkia lewisii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-9359 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX CC Related sequence X64332 XX FH Key Location/Qualifiers FH FT source 1..9359 FT /organism="Clarkia lewisii" FT /strain="population LDG 795" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="L20" FT /db_xref="taxon:3936" FT CDS join(1263..1313,1396..1472,1617..1698,1786..1833, FT 2223..2378,2473..2569,2683..2725,2949..3016,3098..3182, FT 3501..3549,3989..4061,4672..4732,4922..4988,5086..5142, FT 5229..5282,5378..5506,5947..6010,6097..6170,6244..6297, FT 6386..6454,6550..6639,6731..6841,6934..6984) FT /gene="PgiC2-a" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P29333" FT /db_xref="HSSP:1HM5" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P29333" FT /protein_id="CAA61565.1" FT /translation="MATPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGVAAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHNIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEELKKENVSEH FT LIPHKTFTGNRPCLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEEGFNFSTKTLLTRYLQATTDVPADPSTLLPNI" FT exon 1263..1313 FT /number=1 FT intron 1314..1395 FT /number=1 FT exon 1396..1472 FT /number=2 FT intron 1473..1616 FT /number=2 FT exon 1617..1698 FT /number=3 FT intron 1699..1785 FT /number=3 FT exon 1786..1833 FT /number=4 FT intron 1834..2222 FT /number=4 FT exon 2223..2378 FT /number=5 FT intron 2379..2472 FT /number=5 FT exon 2473..2569 FT /number=6 FT intron 2570..2682 FT /number=6 FT exon 2683..2725 FT /number=7 FT intron 2726..2948 FT /number=7 FT exon 2949..3016 FT /number=8 FT intron 3017..3097 FT /number=8 FT exon 3098..3182 FT /number=9 FT intron 3183..3500 FT /number=9 FT exon 3501..3549 FT /number=10 FT intron 3550..3988 FT /number=10 FT exon 3989..4061 FT /number=11 FT intron 4062..4671 FT /number=11 FT exon 4672..4732 FT /number=12 FT intron 4733..4921 FT /number=12 FT exon 4922..4988 FT /number=13 FT intron 4989..5085 FT /number=13 FT exon 5086..5142 FT /number=14 FT intron 5143..5228 FT /number=14 FT exon 5229..5282 FT /number=15 FT intron 5283..5377 FT /number=15 FT exon 5378..5506 FT /number=16 FT intron 5507..5946 FT /number=16 FT exon 5947..6010 FT /number=17 FT intron 6011..6096 FT /number=17 FT exon 6097..6170 FT /number=18 FT intron 6171..6243 FT /number=18 FT exon 6244..6297 FT /number=19 FT intron 6298..6385 FT /number=19 FT exon 6386..6454 FT /number=20 FT intron 6455..6549 FT /number=20 FT exon 6550..6639 FT /number=21 FT intron 6640..6730 FT /number=21 FT exon 6731..6841 FT /number=22 FT intron 6842..6933 FT /number=22 FT exon 6934..6984 FT /number=23 XX SQ Sequence 9359 BP; 2734 A; 1634 C; 1677 G; 3314 T; 0 other; atatacatgg tatacctatg gctagggttg taactgtact catcttaaca aagaagaaga 60 tacgccgata ataacttttt atttaaggtg atttataatt aaggtgtata tattatatat 120 ataaatataa tagtaaagtt tctttaattg tttattataa ttcctatatg tattgtggtg 180 tgattctaaa cttctttttg gccaataccg tttcctaact ttgatttata ataataataa 240 ttattattta ttatattgtg tttctttact ttgattattt attattatta gatagtacgt 300 ttctaaattt cttttagtct gatagttctt cttaacttat tattataata ttatatagtg 360 tttcttaact ttgattattt attattatta gataatatat tgtcgtaata ttatatgtat 420 gtagtataaa tttgtattat tttattctat atatatatat tgcttacgtg gcggcttacg 480 gtcttccgga accaaactgt atagatttac tatttaaaag gaaactttta attaatttgt 540 ttctttattt tgcgtagagc ttaaattagg agataaaaaa aattcttaat ttacattcac 600 tcaatattat atatctaaat ttagagagct tcaattaaat taggaaatat tgactgcgtg 660 aactgtacac gtgtcgacca gagggcttcc ggtgctgaat taatataata taatagatag 720 ataatataat agatatgtac gagcttgaca gttgacacct gatcttctcc ttttgtgtgc 780 tacgccgcat gcaccacacc ccctgcacgt gacgacaatc aaagacaaaa caagtctttc 840 tcttccttcg tctccgacct ccgttacttt ctatctgctt ctctgaatct cctcagcttc 900 ttccaccatt cgccatcacc accttcttca ggtaggcact cttagtcatt ttgggcttaa 960 cttcaactac gcatctcaac tttcattgct ttttatttga ttatcatcat ttttagcttt 1020 ctggcactat ctgttccgct gttcgatcaa agaacccagc tcatctccat tggagcaatc 1080 cgaaaatgct gcttttattg ctaatttgat tgctcaaatg gcattgaaga taaatctaaa 1140 gtatttgttg gaaagagcag ttgcaattga gagtccagct cattctttat gatacatgat 1200 ctattaagta atctttggca ctaatttctt gctttcttct taagcgattt agtgcacgtc 1260 caatggctac gccagctttg atcagcgaaa ctgaggcatg gaaggatttg aaggtatgta 1320 tttgctttta gtcttggacg ctagctcgtt tagtagtggc tggctgcaaa tttgaacctc 1380 ataacgcacc tgcaggctca tctcgagggc ataaaaagga ctcatctgag ggaattaatg 1440 ggagacactg aaagatgcca gtcaatgatg gtgtaagtat ttttcatcga cttattgttt 1500 ccttctctct ttcattaggg tgaagcgagt taaactacaa tctctaatga ataagccagt 1560 tctgtatgca ctccagttcc tattctaagc tttgcgttat ctgtttactg ttgtagtgag 1620 tttgacaaca tattcttgga ctactcacgg cagcaagcct ctcctgacac aattaataag 1680 ctctacaaac tagcagaagt aagcacctct ctgttgctag tccagcactg atcataatct 1740 gttaaaaaag caacattttc ctgatgttga cttgatcttt tccaggcagc acatctcaag 1800 cagaagattg accgcatgta taatggagac catgtaagtt ttgactaatt attgctgatc 1860 tagtctatct actttttgct ttgatttgta gctgctgagt gctgaccagt gaaaccactg 1920 tctatctaac agtcgagttt ggtttgttcc ttagatatcg tgggaaatac aactcatatt 1980 gctcctttcg cctgtggatt ctgttaaatt gtttccaaca tgacatatcc attattcttg 2040 gatttttgga gtgaaaaata tgcctatctc aaaataaatg taaatattaa ctattaagcc 2100 tgtttaaact agctatattg tttttgtatc ttttactaga actaagggag tgatgggata 2160 gatggaccgt tgctcttatc ttttcaaacc tgttaataaa atagatttcc ttggcttggc 2220 agattaacag tacggaaaac aggtcggtac tacatgtcgc tcttcgagct ccaagaaatt 2280 cagctatatg cagtgatgga aagaatgtgg ttccagatgt ttggaatgta cttgacaaga 2340 tcaaagactt ctcagagaga gttcgcaatg gttcatgggt aaaatacagc tcttatttga 2400 atttgattag gatatttaag gtccaaaatc actgagttct tctaaactcc aataagtgat 2460 cacatttggt aggtcggggc tacagggaaa gaactcaagg atgttattgc tgttggtatt 2520 ggtggcagct tccttggtcc tttgtttgtc cacacagcac ttcaaacagg taccgtgtct 2580 gacacttatg atgcttaact agattcttct tgagagtgtt ttccattgtt gggtttaaaa 2640 aaaagtacga gttcataact tatagtttgt gtaaacttgc agatccagaa gccagtaaga 2700 atgctagagg ccgggagctg cgtttgtaag tctcagctat gcatcgttct tttcttcttt 2760 gtggtttcca tgatgattaa ctatagacta aatggatatt aaaggtcaga ggaaataaag 2820 gaggaaaagc cataatgttc aaatggccaa tcttcatatc ctctttgagc tccctttgaa 2880 aataatgccg tacttaaaac tgactatttt cgtaaatgga agattgacct attattctgt 2940 ttgtacagtc tggcaaatgt tgaccctatt gacgctgcaa gaaacatctc gggtttaaac 3000 ccagaaacca cacttggtaa ttgtctttct cattatgctg gatttaggta tcgtctttct 3060 tttgcctttt gtttgatgat cttaatctta cctgcagttg tcgttgtttc aaagactttt 3120 acaacagccg aaactatgct caatgctcga actttgaggg aatggatatc ttctgctctt 3180 gggtttgtct aatactgcta acttttatgt agctttaatt acaagattca gtacaacaat 3240 ataaaatttt tggcaatctg gaagagaaat gattttgatt ttcagtatgc aatttcatcc 3300 atgcagaaaa cagtttagaa actagtgcag atattgctgt ccagtatctc aataaatcac 3360 aactattttt tcttagtatt tgcgctattg aaattcgagt tgcacttact gatatatccc 3420 aaccttttaa ctttaagaaa aggtatatgc tccctctctc tctctctcac tgaccaaagt 3480 cataaaaatg ttggttacag cgttgctgct gttgcaaagc acatggttgc agttagtaca 3540 aatcttccgg tatgattttc tctttcatat gttattttct tgacatcctt cagctctaat 3600 ttttactggt attcttcaat aataggcaca tgtgtatctt gttattatat gatttgaatc 3660 ttctcgacac tcttcaaata agtcagcatg ggaacttaaa aaaatgattt attcaagcat 3720 ctttatgcac ttaattaatt gaattgtcca tgccaaagta ggatttcttg ttttatgaag 3780 aaaattcttt gattctcata ttgtatatgg taggcctatc cccatgtata ttatttattt 3840 gtctagctat gcagtttcat ttgatgagct gttagacaat tgagatttga cactctatga 3900 ttagttatgt ggactatcag gggtttaccc aaataatttc tgtgatggag ctcgttactt 3960 acctagatct cttatgcttc ttctgcagct tgttgaaaag tttggcattg atcctaacaa 4020 cgcttttgca ttttgggatt gggttggtgg ccgatatagt ggtaagctat cagttttttc 4080 ttaatcccac agattcaatc caataaattt ccctatggtg ccaatactta tatatttggc 4140 ttataaccta tgaaaagtct gaagtttgac ccatgttaac cggagaggtc tgaaatttca 4200 caagttaata tgagaggtct gaggtttcaa ctttgttgat ataagaggta tctgttaatt 4260 ttttccgtta aaactgacgt aagttggtca cgtgtttggc agtgaccaga aataaaatta 4320 aattccaaaa atgcccttct atcaaaactt aagaatataa atttgagaac taaattgaac 4380 aaaataagaa atagggactc gattcttaat ttgacttcaa gggtaatttt gtcatttcac 4440 attttctaaa ataatgtatt aaataaaata aaatattcat aggggcaaaa gtgtcatttt 4500 agacaattat gttaaattta accacggaaa accaaatttc aacaaagttg aaacttcaga 4560 ccttacatat taacttttga aacttcagac ctctccggtt aacatgggtc aaacttcata 4620 tctttcatag gttattaacc ctatatattt acacctgtat tcttgtggca gtctgtagtg 4680 ctgttggagt gttgccatta tctcttcagt acggctttgc tgttgtggag aagtatgtaa 4740 acctatcatt tcacacctat caattttcct ctggttttcc atgctgtcaa tacatcaaat 4800 tgcttccatt gacatttaat attcgaaaat atagttcata aatgctggtt ttcgtaacaa 4860 aagtttactt agtggtcata aggctctctt ataattcaaa tgttgtaaat tgtttatgaa 4920 gattcttgca aggggctcac aacattgatc aacacttctc ctctgcgcca tttgagaaaa 4980 atattcctgt aagttcccac tagatactct atgattagtg atttctgcca taccttaatt 5040 tataagtttg atgataaact tgaatttatg gaatctttaa tacaggtact tctaggtttg 5100 ttaagtgtat ggaatgtatc atttcttgga taccctgcaa gggtgagttc gcatgatatg 5160 cctaaggcat aatctccttt actaagtagc ctctaatcca ctccactgaa gcaatcgatt 5220 ctttttaggc catattacca tactcccaag cactggagaa attggctcca catatacaac 5280 aggtacgcta gtgatcacat cacatttctt tcttagtaat aattatgttc gaattgtaat 5340 gaatttagct ttgcctcttt atgatgtgac tttacaggtc agcatggaga gcaacggcaa 5400 gggtgtgtcc atagatggtt tgcctcttcc ctttgagtct ggtgaaattg actttggtga 5460 accaggtaca aatgggcagc acagttttta ccagttgatt caccaggtaa cttcttttac 5520 tatctcacgt agttacgtat cgcatgtgcc atatttatcc ttattctatt tcatccagaa 5580 ttaagagcct aatataggaa taccttgtac ctttcacaca gctcccttct catcctatat 5640 gtgattagga ctactactca aattcatgct ttttaatggg aaaagaacct atttagtgtc 5700 tcaggtttac cccatgtgtc aatttggtgt ctcaggatta aattgttaat atttggtgtt 5760 ccaggtttca attatgttgc tatttggtgt ctccgtcgaa tttggggtta actttggcca 5820 gaatgagatg aaaagacaat tttgccccct tttttttttt tttttgcaaa gtcacttgtc 5880 taattccggt cggggctgat ttgggcattt tactaaattt cctaacacat tcatctcgaa 5940 taacagggcc gtgtcattcc ctgtgatttt atcggtgtcg tgaagagcca gcaacctgtt 6000 taccttaaag gtaaaattgc agatggaggt agctatgttt ctaatgaggc tttatatcct 6060 actacactac atcagttatt tccactttta ctacaggtga agtggttaat aaccatgatg 6120 aactgatgtc caattttttt gcccagcctg atgctttggc atatggcaag gtaactgtcc 6180 taatccatct gcactggctt tcaaattacc atgaaactta actgcataca attgttggtt 6240 tagaccccag aagagctaaa gaaggagaat gtttcagagc atcttattcc tcacaaggta 6300 tcactctgat ttgtggaatt caacatctta ttcctcgtca ggcttatatt aattaattaa 6360 ttaattttcg tgtgatatta tgcagacatt cactggtaat aggccatgtc ttagcattct 6420 gcttccaaca ttggatgctt accgtattgg acaggtctgt ttgttccgct tcaatgatta 6480 ccgatacgtt tccttttaga aatagttgtg taatatctat ttggtgtgtt actgtttgtg 6540 cactgtcagc tgttggcaat ttatgaacat agagttgcag tgcaaggttt cgtatggggc 6600 atcaactcat ttgaccagtg gggagtggag ttaggaaagg tgaagtgcct gccattcaaa 6660 atgctggttt ttttgctgca ataacttggc ctcattttgt tttggtctta atctgtgtta 6720 tttgttgcag tctctggcaa cacaagtccg aaagcaactc catgcatctc gagtgaaggg 6780 agaacctgtg gaggagggct tcaacttcag cactaaaacc ttgttaacaa gatacctcca 6840 ggtagtattg tatttatctg gctaaaccaa aacacgcatc gagatgaata taaaagtagg 6900 taattaagtg taatcgtatt ctcttatgtt caggcaacta ctgatgtccc tgctgatcct 6960 tccaccctgc tgcctaatat atgaataggt tgattttcga ggtttttgaa gacggatgtt 7020 atccgtagag ttgtgatatc ttttttttgc ctttctgggt tcttattgct ggctgttctt 7080 aatatgcaac tacactgcag caatatccga ctctcttgta tctgtaaacc ccaatacctt 7140 tgggtttgta tgaattctcc ttatcaataa caaataataa tagaagagag gtgaggtgta 7200 ttttaaagat actaactggt tggttgtggc gagatttatt atcacatgtt ctagacttga 7260 agaagaagaa gacactagtt aactctatac ttaggtctcc aagtccttgg tgactcatca 7320 gatgagatct ctcaatctta aacataaaag aggtcttaag tctccacgaa ctagagatta 7380 cgaatgaggg gagataaatt aggggttaat ggggtttaag accacacttt tcacggttgg 7440 ttggttgtgt gaatgattaa ttgtacaaat gaatcttctt agagaaattg tttcccttgg 7500 tgggaacaca tgccaacaca tgtgttacca cttctcgaat cattccacgc catttataaa 7560 aattgaggta tatgtgttga cacatggcat ggaaagattg agtgagtgat aacacatata 7620 ttgacatgta tgtattccca ccgaggaagc aataatctaa gtttcagtca aaccctattt 7680 atatagattt actaagatac atagcatatt atattattta ctttataaaa ttcgcgtaac 7740 atggttaatt tttttttttt gggttaacat gtcttttagt ccaacatttt tgacaacttt 7800 taggttttag ttgacctaac catgttggac taaaactcaa aagttgtcat agatgttgga 7860 ccacaagaca tgttaacctt tttttaaaaa agaatcaagt taattagtca tacactgtgt 7920 aaatgatgcc aatgagaaaa cactatatac atgaacgaaa gtcacatact tggatatttt 7980 gattaacgaa attagaaggg ttaatagatc atttggtaca acatgtttga cggttttttg 8040 ctttttttgt aacattttac ttttggtgca atttgtacac tttttagtgc atacgttagt 8100 tgaccgttaa atagtcacgt gacttgcaca tgcctagccc aaaatttcta ttttgtttag 8160 tttagtcctc aaatttattg cataactttt tatttttgca atttaactcc taaacaattt 8220 caattacacc ctaggactaa attgacctag tcatggtcca cccatgacta agatcaccaa 8280 ggttcgacct agccatatgg gtcgaaccat gcctaggtca atttagcctt agggtcaaat 8340 tgacataatt ggacctaagg ctaaattgac ctagccatag tccaacacat ggctaggtcg 8400 aaccatggtt aaggtcgccc tggtcctaca acctaaggca tgatccgacc tagctatagt 8460 ccaacacatg gcttggtcaa tttagctcta gggtgatgtt gaaaatattt aggagctaaa 8520 ttgcataaat aaaaaattag aataataaat ttgaggtcta aggtgaaaaa aaagaaattc 8580 ggggctaggc atgtgcaagt cacatgacta tttagcggtc aaactaacgc tcagctaacg 8640 gatgcatcaa aagtgtacaa ttgcaaacgt attgcactaa aagtatacaa aaataaagat 8700 tttgcacaaa aaactaaaaa tcgtcaaata tgttgtacca aaaaacctat taactcaaat 8760 tagaaagggg ttggctaaat tgcagtcgag tttatttaaa cttgaattct cagccgttag 8820 tttaaaaatg aaggaaacta ttgacatatg tattcgactt atactaatgg attattaaag 8880 attagactaa attattggtt aagatatgtg cttttattcc ttatatatat cttatgcagc 8940 ttttataatt gtccatgtaa atttcataca atgcccggtg aaagaactcg atatgataca 9000 tatttttcaa atttatatcg aatagtattt aaatgtcact aataaaataa aaagaatgtt 9060 gtggtgttat tcaagtaaat aatcaagttg taatacatat ttaaggtatg taatatttta 9120 acttatacat tttttttatt gcacatcgta cacaacgcgt aaagactaca tgacgatttg 9180 ttgtttgtag tgttcttggt gatacgttga gataatattt ttctggaaca tatattttgg 9240 cgagattaag tgaccccacc attttcttga agtttcgtct gcagtttttt agtattttgt 9300 accaatcctt atttttcatt aacttcatga atagtttttg tcctatgtga tcgggatcc 9359 // |
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