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EBI DbfetchID X89384; SV 1; linear; genomic DNA; STD; PLN; 6609 BP. XX AC X89384; XX DT 04-JUN-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE C.lewisii PgiC1-a gene for cytosolic phosphoglucose isomerase XX KW cytosolic phosphoglucose isomerase; glucose-6-phosphate isomerase; KW PgiC1-a gene. XX OS Clarkia lewisii OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RP 1-6609 RA Gottlieb L.D.; RT ; RL Submitted (30-JUN-1995) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, Dept. of Genetics, University of California at Davis, Davis RL CA 95616, USA XX RN [2] RA Gottlieb L.D., Ford V.S.; RT "Phylogenetic Relationships among the Sections of Clarkia (Onagraceae) RT Inferred from the Nucleotide Sequences of PgiC"; RL Syst. Bot. 21:1-18(1996). XX CC Related sequence X71084 XX FH Key Location/Qualifiers FH FT source 1..6609 FT /organism="Clarkia lewisii" FT /strain="population LDG 795" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="L53" FT /db_xref="taxon:3936" FT CDS join(815..865,948..1024,1176..1257,1345..1392,1767..1922, FT 2017..2113,2282..2324,2565..2632,2716..2800,3162..3210, FT 3641..3713,3843..3903,4296..4362,4498..4554,4636..4689, FT 4786..4914,5356..5419,5502..5575,5658..5711,5791..5859, FT 5964..6053,6131..6241,6372..6422) FT /gene="PgiC1-a" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="cytosolic phosphoglucose isomerase" FT /note="dimer" FT /db_xref="GOA:P34796" FT /db_xref="HSSP:1HM5" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P34796" FT /protein_id="CAA61564.1" FT /translation="MASPALISETEAWKDLKAHLEGIKMTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTISKLYKLADAAHLKQKIDRMYNGDHINTTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSDSVRNGSWIGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEELKKENVSEH FT LIPHKTFTGNRPSISILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHGSRVKGEPVEEGFNFSTKTLLTRYLQATSDVPADPSTLLPNI" FT exon 815..865 FT /number=1 FT intron 866..947 FT /number=1 FT exon 948..1024 FT /number=2 FT intron 1025..1175 FT /number=2 FT exon 1176..1257 FT /number=3 FT intron 1258..1344 FT /number=3 FT exon 1345..1392 FT /number=4 FT intron 1393..1766 FT /number=4 FT exon 1767..1922 FT /number=5 FT intron 1923..2016 FT /number=5 FT exon 2017..2113 FT /number=6 FT intron 2114..2281 FT /number=6 FT exon 2282..2324 FT /number=7 FT intron 2325..2564 FT /number=7 FT exon 2565..2632 FT /number=8 FT intron 2633..2715 FT /number=8 FT exon 2716..2800 FT /number=9 FT intron 2801..3161 FT /number=9 FT exon 3162..3210 FT /number=10 FT intron 3211..3640 FT /number=10 FT exon 3641..3713 FT /number=11 FT intron 3714..3842 FT /number=11 FT exon 3843..3903 FT /number=12 FT intron 3904..4295 FT /number=12 FT exon 4296..4362 FT /number=13 FT intron 4363..4497 FT /number=13 FT exon 4498..4554 FT /number=14 FT intron 4555..4635 FT /number=14 FT exon 4636..4689 FT /number=15 FT intron 4690..4785 FT /number=15 FT exon 4786..4914 FT /number=16 FT intron 4915..5355 FT /number=16 FT exon 5356..5419 FT /number=17 FT intron 5420..5501 FT /number=17 FT exon 5502..5575 FT /number=18 FT intron 5576..5657 FT /number=18 FT exon 5658..5711 FT /number=19 FT intron 5712..5790 FT /number=19 FT exon 5791..5859 FT /number=20 FT intron 5860..5963 FT /number=20 FT exon 5964..6053 FT /number=21 FT intron 6054..6130 FT /number=21 FT exon 6131..6241 FT /number=22 FT intron 6242..6371 FT /number=22 FT exon 6372..6422 FT /number=23 XX SQ Sequence 6609 BP; 1863 A; 1236 C; 1213 G; 2297 T; 0 other; accacctttg aattaatatt acttgaatcg attaggacac cagaagagag gcgacgacaa 60 ccgtaaggtg gcaacgagtg caaagtatca gaaaatagat gaatcacttc gagtattaac 120 gacaactgat aggctactta cgtgagaaat tctattagtt tttaacccaa aaaaaatcaa 180 caaatctacc taattgtact tacagtaaag ttcaactaga ttttctccac aaagaaaact 240 taactattta aaagtccagc atttggctaa aaaaaaaaaa aaaagtaaaa gtccagataa 300 ctaatttata tttactcata aaaataaaga aactgacatc aatcggcaat cagcagcatc 360 ttcctcttct gtgtgctacg ccgcatgccc cacaccctac cgcacgtgac gacaaactca 420 acatcactac acgaaaacaa gtgcttctct tcattcgtct ccgacctccg ctacttttca 480 cctgcttctc tgaatcgcaa tcaccactca cttcaggtaa tgtcattcat tttttgttta 540 acatcaacta aacatctcaa atttcattgc ttttcatacg gttagctttc tggcactatc 600 tattctggtt ttcgataaaa aaaaaatatg ctgcttttat tgctaattcg attgctcaaa 660 tgacattgaa gataaatcca aattattttt tggaaagtac agatgcaatt gagagtccag 720 ctcactcttt atgtatacat gatcgatcta ttgagttatc tctggcacta atttcttgct 780 gttgtttctt ctgatgcgat ttagtgcaag tctaatggct tcgccagctt tgatcagcga 840 aactgaggca tggaaggatt tgaaggtatg tatttggttt tagtctggga cactagctcg 900 gctagtaatg tctggctgca aatttgaacc tcataacgaa cctgcaggct catctcgagg 960 gcataaaaat gactcatctg cgggaattaa tgggagacac tgaaagatgc cagtcaatga 1020 tggtgtatgt atttttcatg gactgtgctc tgttattgtt tccttcactt cttgtagggt 1080 gaagcgaatt aaactacaat ttgtaatgaa taactcagta tgtttgcact cccctgccta 1140 ttttaagctt tgcgtatatc tgtttactgt tgtagtgagt tcgacaacat attcttggat 1200 tactcacggc agcaagcctc tcctgataca attagtaagc tctacaagct agcagatgta 1260 agcacctctc tgttgctagt tcagtactga tcatcatgtg ttaaaaggga aacatttccc 1320 tgatgttgac ttgatctttt acaggcagca catctcaagc agaagattga ccgcatgtat 1380 aatggtgacc atgtaagttt tgactaatta ctgctgattt agtccatctg ccttttgctt 1440 tgatttgcag ctgctacgtg ctgaccagta taaccactgt ctctttagct gtcaagtttg 1500 atttgttcct tatgtattat aatcagaaat acaacttgta ttgctccttc cgcctcttga 1560 cagcttggca tatccatttt ccttgaattt taagagtgaa agatatggct ttctctaatt 1620 aaaatgttaa atattaagta tcagtttaaa ctggctatat tgtttttaat cctttactag 1680 aactacggga gtgatgcaag agttgggctg ttgctcttat atattcaaaa cctttgttaa 1740 taaaataggt ttctttggcc tggcagatta acactacaga aaacaggtcg gtactacatg 1800 tcgctcttcg agctccaagg aattcagcta tatgcagtga tggaaagaat gtggttccag 1860 atgtttggaa tgtacttgac aagatcaaag acttctcaga tagtgttcgc aatggttcat 1920 gggtaaaata cagctcctag ttgaatttga ttagggattt taagttccga aatcattgag 1980 ttcatctaat ctccaataat tgaccacatt tgatagatcg gggccacagg gaaagaactc 2040 aaagatgtta ttgctgttgg tattggtgga agcttcctcg gtcctttgtt tgtccacaca 2100 gcacttcaaa caggtaccgg tatcagacac ttatagtgct taactgtttg attatctttt 2160 atttgtcttc taaagatggt agctagattc aactgtacca tctaatattt gaaaggctct 2220 tccattgttg ggtttagata tgaatataag ttcatacctt atactttgtg gaaacttgca 2280 gatccagagg ccagtaagaa tgctagaggc cgtgagctgc gtttgtaagt ctcagctact 2340 gtcaatgtat cattattttc ttctttgtgg tttccatgga tattaaaggc cagaggaagg 2400 aaaagaggaa aagccataat gttcagctga ccaattatca tattctcttt gctaatatac 2460 tgtttgagct ccctttgaaa ataatggcat gcacagtcat ccaagcttac ttaaaattga 2520 gtatttttat tatggaagct tgacctatta ttctgtttgt gcagtttggc aaatgttgac 2580 cctattgacg ttgcaaggaa catctccggt ttaaacccag aaactaccct tggtaattgt 2640 ctctctcgtt atgctggttt tagatatcga ctttctattt cggcttttgt ttgatgatct 2700 taatcttacc tgcagttgtc gttgtttcaa agacttttac aacagcagaa actatgctca 2760 atgctcgaac tttgagggaa tggatatctt ctgctctcgg gtttgtcttc aaactgccaa 2820 cttttttggt agcttttaca taattatgga gcagactagt acaagattca gtaccgtaat 2880 ataacttttg gcaattctgg aagcgaaatg atatagattt tcagtatgca acttcatcca 2940 tgcagctatg gcaatcccat agctgcaaca ctatagaaaa cagtctagaa acttctgcag 3000 atattgttgt ccagtatctt aataaatcac tactagtttt tcttagtatt gcactattga 3060 aatttcagat gcgcctactg atatatccca acttttaaca ttaaaagaag atatatgctc 3120 tctctctctc tctgaccaaa gtcatataat gttggttaca gcccttctgc tgttgcaaag 3180 cacatggttg cagttagtac aaatcttccg gtatgatttg ctctttcata tattattttc 3240 attacatcct tcaggtcaaa tttttactgg tattctccaa ttataatcac atgtctatct 3300 tgttattata tgctttgaat cttcttgacg catgttcaaa taagccagca tgggaactta 3360 taaagaatga tttattcaag catctctttc tgcacataat taattaaatt ttccattgct 3420 aattaggttt tcttttttga cgaagtaaat tctatgactg ctcataatgt atataatagg 3480 cctatctcca tgtatattat ttatgctaaa tatcggaagc agtatctgtc tagctatgca 3540 gtttcatttg gtgagctggt agactattga gatttgacat tctacaatta gttgtgatgg 3600 ggctcgttac ttacctggat gtcgtgtgat tcttctgcag cttgttgaaa agtttggcat 3660 tgatcctaac aatgcttttg cattttggga ttgggttggt gggcgatata gtggtaagct 3720 atcctatttt tcttaatcca tatatttaat ttaaataatt ttgcatggat tgtttgagct 3780 gttcctcgcg tctctcctgt ggtactaata attatatgtt cacatctata ttattgtggc 3840 agtctgtagt gctgttggag tgttgccgtt atcccttcag tatggctttg ctgttgtgga 3900 gaagtatgta aacctatcat ttcgcacatc atatcaattt tcttctgctt ttccatgtca 3960 atacatccaa tcgctttcat tgtcatttta tttttatttt ctggaagttc caaaagataa 4020 gaatatgttt ggtaatatat acatgtataa actatatata ttctctggaa acacccttct 4080 gcagtgaaat acgtaaacaa attattaaca aacaccatag aggagtgtag acatttttgg 4140 agtaaatgcc ttgtagtaaa ttgcatgata gagagcagga gaattgcttg tcctcttcga 4200 aaagtatagt tcatatatac tgctgactat tatggagttg actaattttt tttaaataag 4260 cggtcatagt aaagtgttgt aaattcttta tgcagattct tgcaaggggc tcacagcatt 4320 gatcagcatt tctcttctgc gccatttgag aaaaatatac ctgtaagttc cattgataca 4380 cacttgtata gtaaagtaat gcttggatgg atgcacaagt tgatgtttag ttatttcagc 4440 cataccccct tttataagtt tgatgacaaa tttgaattga ttgaatcttt aatacaggta 4500 cttctaggtt tgttgagtgt atggaatgta tcatttcttg gataccctgc aagggtgagt 4560 tcacatgata tgcttgaggc attatctcct ttctttagta gtctttaatc cactgaagca 4620 atcaattctt tctaggccat cttaccatac tcccaagcac tggagaaatt ggctccacat 4680 atacaacagg taagctagtg atcacatttc tttattagta ataattaggg tcttggaact 4740 ggaatgaagt tggttttgtg acctcttctt gatgtgactt tacaggtcag catggagagc 4800 aacggcaagg gtgtgtccat agatggtttg cctcttccct ttgagtctgg tgaaattgac 4860 tttggtgaac caggtacaaa tgggcagcac agtttttacc agctgattca ccaggtaact 4920 tccttactat ctcaggtaga cacgtttcac ttctgccata tttatccttg aattattcta 4980 tttcatccct aatataggaa taccttctat tcgattattt cccgtatgtg cattgtggac 5040 tgtgtccatt ttattttaat tttgaactaa aacttcaaaa aaaaaaaaaa tttccttcga 5100 gcaaaaaaac tactgcaaag atctggacct ttcaccatgc tcacaaggca attgcgagtt 5160 gtattcttgt ttaggcaact ccctttctca tcctatatgt gattaggact actactcaaa 5220 ttcacggttc aatgattcct tcaaaatgtt cagctgcaca aatacatttc ttcaataaca 5280 atttagttga ggttgaatta agcaaagtcc actaagtaag tttctttgct aacacacatg 5340 catcttgaat aacagggccg tgtcattccc tgcgatttta ttggggtcgt gaagagccag 5400 caacctgttt acctcaaagg tgaaaattgc agctagctat atttctaatg aggctttata 5460 tttctacagt ctgcatgagt tatttgtcac ttttattgta ggtgaagtgg ttaataacca 5520 tgatgaactg atgtccaatt tttttgccca gcctgatgct ttggcatatg gcaaggtaaa 5580 tcctaattcc atgtgcaata gctttcaaat ccgctctttc atgaaagtta agtgcaatac 5640 aaatgttgtt ggtttagacc ccagaagagc taaagaagga gaatgtgtca gagcatctta 5700 ttcctcacaa ggtaatactg tctctgattt ggggaattca acatcttctt atttgttgta 5760 aagctaatat gaatgtgtga tattatgcag acattcactg gtaacaggcc atctattagc 5820 attctgcttc caacattgga tgcttaccgt attggacagg tctgtttgtt ctgcttcaat 5880 gattactacc gatatgtttc ctttaagaaa tatagttgtg taatctctat ttggtgtatt 5940 actgtttatt tctggactgt cagctgttgg caatttatga acatagagtt gcagtgcaag 6000 gtttcgtatg gggcatcaac tcatttgacc agtggggagt ggagttagga aaggtgaagt 6060 gccagccatt caaaatgatt ttagctttca ttttgtatta gtcttaataa tctgttgtta 6120 tttgttgcag tctctggcaa cacaagtccg aaagcaactc catggatctc gagtcaaggg 6180 agaacctgtg gaggagggtt tcaacttcag cactaaaacc ttgttaacaa gatacctcca 6240 ggtattctat ttatctggct aaaccctaaa caccccccct actagtcttt ctttgctgag 6300 gtggcacatc agatgattct aaatcaatgt agttaattaa gcttaatctt attctctcat 6360 ctcatgtaca ggcaacttcc gatgtccctg ccgatccttc caccctactg cctaacatat 6420 gattaggctg cttttcgatt ttttgaagac ggatggttgt tatccgtaga gttgtcatct 6480 tcttttgcct taattgctct tcttactctt gactctctct tgtttgtatc tgaaatccca 6540 tacctttggg tttgtatgaa ttctcttaat caataataaa taataataat atgaagacaa 6600 gagattatt 6609 // |
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