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EBI DbfetchID X80667; SV 1; linear; genomic DNA; STD; PLN; 5947 BP. XX AC X80667; XX DT 20-APR-1995 (Rel. 43, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE C.xantiana PgiC2 gene XX KW glucose-6-phosphate isomerase. XX OS Clarkia xantiana OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RX AGRICOLA; IND20466557. RX DOI; 10.2307/2419446 RA Ford V.S., Thomas B.R., Gottlieb L.D.; RT "The same duplication accounts for the PgiC genes in Clarkia xantiana and RT C. lewisii (Onagraceae)"; RL Syst. Bot. 20(2):147-160(1995). XX RN [2] RP 1-5947 RA Gottlieb L.D.; RT ; RL Submitted (26-JUL-1994) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, University of California at Davis, Section of Evolution & RL Ecology, Division of Biological Sciences, Davis CA 95616, USA XX FH Key Location/Qualifiers FH FT source 1..5947 FT /organism="Clarkia xantiana" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="X28" FT /db_xref="taxon:3938" FT CDS join(184..234,317..393,548..629,713..760,1160..1315, FT 1410..1506,1674..1716,1957..2024,2106..2190,2518..2566, FT 3032..3104,3202..3262,3442..3508,3632..3688,3767..3820, FT 3911..4039,4451..4514,4599..4672,4740..4793,4874..4942, FT 5077..5166,5248..5358,5609..5659) FT /gene="PgiC2" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /db_xref="GOA:P54242" FT /db_xref="HSSP:1GZD" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54242" FT /protein_id="CAA56694.1" FT /translation="MATPSLISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGVSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGVVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKKENVSEH FT LIPHKTFTGNRPSLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEEGFNFSTKTLLTRYLEATSDVPADPSTLLPKI" FT exon 184..234 FT /number=1 FT exon 317..393 FT /number=2 FT exon 548..629 FT /number=3 FT exon 713..760 FT /number=4 FT exon 1160..1315 FT /number=5 FT exon 1410..1506 FT /number=6 FT exon 1674..1716 FT /number=7 FT exon 1957..2024 FT /number=8 FT exon 2106..2190 FT /number=9 FT exon 2518..2566 FT /number=10 FT exon 3032..3104 FT /number=11 FT exon 3202..3262 FT /number=12 FT exon 3442..3508 FT /number=13 FT exon 3632..3688 FT /number=14 FT exon 3767..3820 FT /number=15 FT exon 3911..4039 FT /number=16 FT exon 4451..4514 FT /number=17 FT exon 4599..4672 FT /number=18 FT exon 4740..4793 FT /number=19 FT exon 4874..4942 FT /number=20 FT exon 5077..5166 FT /number=21 FT exon 5248..5358 FT /number=22 FT exon 5609..5659 FT /number=23 FT intron 235..316 FT /number=1 FT intron 394..547 FT /number=2 FT intron 630..712 FT /number=3 FT intron 761..1159 FT /number=4 FT intron 1316..1409 FT /number=5 FT intron 1507..1673 FT /number=6 FT intron 1717..1956 FT /number=7 FT intron 2025..2105 FT /number=8 FT intron 2191..2517 FT /number=9 FT intron 2567..3031 FT /number=10 FT intron 3105..3201 FT /number=11 FT intron 3263..3441 FT /number=12 FT intron 3509..3631 FT /number=13 FT intron 3689..3766 FT /number=14 FT intron 3821..3910 FT /number=15 FT intron 4040..4450 FT /number=16 FT intron 4515..4598 FT /number=17 FT intron 4673..4739 FT /number=18 FT intron 4794..4873 FT /number=19 FT intron 4943..5076 FT /number=20 FT intron 5167..5247 FT /number=21 FT intron 5359..5608 FT /number=22 XX SQ Sequence 5947 BP; 1622 A; 1128 C; 1141 G; 2056 T; 0 other; cccagctcat ctccattaga gcaatccgaa atttcttctt ttattgctaa tttgattgct 60 caaatgacat tgaagataaa tctaaagtat ttttggaaag agcagatgca attgagagtc 120 cagctcattc gttggcacta atttcttgcc gttgttcttc tttagcgatt tagtgcaagt 180 ccaatggcta caccatctct gatcagcgaa actgaggcat ggaaggattt gaaggtatgt 240 atttgctttt agtcttggac actagctcgg ttagtaatgg ctggctgcaa atctgaacct 300 cataatgcac ttacaggctc atctcgaggg cataaaaagg actcatctga gggaattaat 360 gggagacact gaaagatgcc agtcaatgat ggtgtaagta tttttcatgg actgagctct 420 gctattgttt ccttctctct ttcagtaggg tgaatcgagt taaactacaa tctctaatga 480 ataagcccag ttctgtatgc actccagtgc ctattttaag ctttgcgtta tctgtttact 540 gttgtagtga gttcgacaac atattcttgg actactcgcg gcagcaagcc tctcctgaca 600 caattaataa actctacaaa ctagcagaag taagcacctc tctgttgcta gtccagcact 660 gatcatctgt taaaaggcaa cattttcctg atgttggctt tatcttttcc aggcagcaca 720 tctcaagcag aagattgacc gcatgtataa tggagaccat gtaagttttg actaattatt 780 gatctagcct atctactttt tgctttgatt tgtagctgtt aagtgctgac cagtgtaacc 840 actgtctatc tagcagtcga ttttggtttg ttcattagat atcgtgggaa atacaactca 900 tattgatcct ttcacctgga ttctggtaaa ttgtatccaa catgacagat ccatttttct 960 tggattttta gggtgaaaga tatgcctatc tcaaaataaa tgtaaatatt aagtatctgt 1020 ctaaactagc tgctatatat atatatatat atatatattt tttaatattt tactagaacc 1080 aagggagtga tgggatagtt ggaccgttgc tcttatcttt tcaaacctgt taataaaaca 1140 gctttccttg gcttggcaga ttaacagtac ggaaaacagg tcggtactac atgtcgctct 1200 tcgagctcca aggaattcag ctatatgcag tgatggaaag aatgtggttc cagatgtttg 1260 gaatgtactt gacaagatca aagacttctc agagagagtt cgcaatggtt catgggtaaa 1320 atacagctcc cagttgaatt tggttaggat atttaaggtc caaaatcact gagttcttct 1380 aatctccaat aagtgatcac acttggtagg tcggggccac agggaaagaa ctcaaggatg 1440 ttattgctgt tggtattggt ggtagcttcc ttggtccttt gtttgtccac acagcacttc 1500 aaacaggtac cgtgtttgac acttatgatg cttagctggt taattatctt tcatttgtgg 1560 tctaaagatg gtagctagat tcaactgtag catctaattc ttgaaagggt tttccattgt 1620 tgggtttaaa aatgagtacg agttcataac atatagtttg tggaaacttg cagatccaga 1680 agccagtaag aatgctagag gccgggagct gcgtttgtaa gtctcagcta tgcatcgttc 1740 ttttcttctt tgcggtttcc gtgattaata actatagact aaatggatat taatggtcag 1800 aggaaataaa ggaggaaaag ccataatgtt caaatgacca atcttcatat cctttttgag 1860 ttccctttga aaataatggc atacacaggc atccaggcat acttaaaact gactattttt 1920 gtaatggaag attgaccgat tattctgttt gtacagtctg gcaaatgttg accctattga 1980 cgctgcaagg aacatctcgg gtttaaaccc agaaactaca cttggtaatt gtctttctca 2040 ttatgctggt tttaggtatc gtctttcttt tgccttttgt ttgacgatct taatcttacc 2100 tgcagttgtc gttgtttcaa agacttttac aacagccgaa actatgctca atgctcgaac 2160 tttgagggaa tggatatctt ctgctcttgg gtttgtctaa tactgctaac tttttggtag 2220 ctttaattac aagattcagt accacaatat aatttttggc aatctggaag agaaaggatt 2280 tagattttca gtatgcaatt tcatccatgc agctaaggca ataccattgc tgcaacaata 2340 tagaaaacag tttagaaact tctgcatcag tatctcaata aattgctact attttttctt 2400 agtattgcac tattgaaatt ttgagatgca cttactgata tatcctaacc ttcttttaac 2460 tttaagaaaa ggtatatgct ctctctctga ccaaagtcat taaaatgctg gttacagcgt 2520 ttctgccgtt gcaaagcaca tggttgcagt tagtacaaat cttccggtat gattttctct 2580 ttcttatatt attttcttga tatccttcag ttctaatttt tactggtatt ctccaataat 2640 aggcacatgt gtatcttgtt attatatgat ttgaatcttc tcgacgctct tcaaataagt 2700 cagcatggga acttaaaaag aatgatttat tcaagcatct ttatgcactt acttaattga 2760 actgtccata gcaaagtagg atttcttgtt tcatgaagaa aattctctga ctgctcatat 2820 tgtatatggt aggcctatcc ccatgtatat tatttttatg ctaaatatca ggagcactat 2880 atgtgtctag ctatgcagtt tcatttgatg agctgttaga ctattgagat ttgacactct 2940 atgattagtt atgtggacta tcaggggttt acccaataat ttctgtgatg gagctcgtta 3000 cttacctaga tctcttatgc ttcttctgca gcttgttgaa aagtttggca tcgatcctaa 3060 caacgctttt gcattttggg attgggttgg tggccgatat agtggtaagc tatccatttt 3120 ttcttaatcc cacggattca atccaattaa tttccctatg gtgccaatac ttatatattt 3180 acatctatat tcttgtggca gtctgtagtg ctgttggagt gttgccatta tctcttcagt 3240 atggctttgc tgttgtggag aagtatgtaa acctatcatt tcacacatat caattttcct 3300 ctggttttcc atgtaatctt cgaaaatata gttcatatat gctgcttact attatggatt 3360 ttactagctt ttcatcacaa aagtttattt agtggtcata aggctctctt ataattcaaa 3420 tgttgtaaat tgtttatgaa ggttcttgca aggggctcac agcattgatc agcacttctc 3480 ctctgcgcca tttgagaaaa atatacctgt aagttcccac tagatacact ctagtaatga 3540 gtggatgcac gagctgatgt ttagttattt ctgccgtacc ttcttttaca agtttgatga 3600 taaacttgaa tttattgaat ctttaataca ggtacttcta ggtttgttaa gtgtatggaa 3660 tgtatcattt cttggatacc ctgcaagggt gagttcacat gatatgccta aggcataata 3720 tcctttatta agtagccact ccactgaagc aatcaattct ttttaggcca tcttaccata 3780 ctcccaagca ttggagaaat tggctccaca tatacaacag gtatgctagt gatcacattt 3840 ctttcttagt aataattatc ttcgaattgt attgaagtta tctttgtcgc tttgcgatgt 3900 gaatttacag gtcagcatgg agagcaacgg caagggtgtg tccatagatg gtttgcctct 3960 tccctttgag tctggtgaaa ttgactttgg tgaaccaggt acaaatgggc agcacagttt 4020 ttaccagttg attcaccagg taacttcctt actatctcat gtagttacta tcacatgtgc 4080 catattctat ttcatccaga ataccttgtt tccattatcc cccccgggta tgtgcattgt 4140 ggaccgtgtc cattttattc tcagctaatt ttgaaccaaa acttaaaaga aaaatccctt 4200 taagcaaaca aactcctaca aaggtatgga cctttcacca tgctcacaag ccaatagcga 4260 gttgtgttct tgtttagcca gctcccttct catcctatat gtgattagga ttactactca 4320 aattcactct ttaatgatta cttcaaaatg ttcagctgca caaatccata tcttcactat 4380 tttagttgag gtcaaattaa gcaaagtcca ccgagtttct gtttcctaac acgtgcatct 4440 tgaataacag ggccgtgtga ttccctgtga ttttatcggg gtcgtgaaga gccagcaacc 4500 tgtttacctt aaaggttaaa attgcagctg gagatagcta tatttctaat gaggctttat 4560 atcctacact acatcagtta tttccacttt tcctacaggt gaagtggtta ataaccatga 4620 tgaactgatg tccaattttt ttgcccagcc tgatgctttg gcatatggca aggtaactcc 4680 taatccatct gtgctttcaa attaccatga aacttaactg catacaattg ttgctttaga 4740 ccccggaaca gctaaagaag gagaatgttt cagagcatct tattcctcac aaggtatcac 4800 tctgatttgc ggaattcaac atcttaatcc tcgtcaagct tatattaatt aattgttgtg 4860 tcatattatg cagacattca ctggtaatag gccatctctt agcattctgc ttccaacatt 4920 ggatgcttac cgtattggac aggtctgaat gtctgttctg ctacgaaata ttacctctcc 4980 tgattcccga tacgtttcct tttagaaata gtgtttaatc tatttggtga ggatagatac 5040 tgaatggtgt gttactgttt ctttccgcac tgtcagctgt tggcaattta tgaacataga 5100 gttgcagtgc aaggtttcgt atggggcatc aactcatttg accagtgggg ggtggagtta 5160 ggaaaggtga agtgccattc aaaatgcggg ttctttgcaa taacttggct tcattttgtt 5220 ttggtcttaa tctgttattt gttgcagtct ctggcaacac aagtccgaaa gcaactccat 5280 gcatctcgag tcaagggaga acctgtggag gagggcttca acttcagcac taaaaccttg 5340 ttaacaagat acctcgaggt atttatctgg ctaaaccaaa acacacctag tctttcttgg 5400 attcagatct cctgaccaac tcttcgtgcc ccagatcgtg ccttacttaa aacacgtgtc 5460 aagatcttaa cagtgaggta ctatctgggg catggagagt ggggcaggag atctgcatcc 5520 gtctttcttt gctgattaca ttaacatgaa catatgagat gaatataaat gtagggaatt 5580 aagcgtaatc ttattctttt gtgttcaggc aacttctgat gtccctgctg atccttcaac 5640 cctgctgcct aagatatgaa taggttgctt ttcgactttt tgaagacgga tgttatccgt 5700 agagttgtga tctcttttgc ctttctgggt tctagttgct gttattaata tgcaactaca 5760 ctgcagcaat atccgactct cttgtatctg gaaaccaata catttgggtt tgtttgaatt 5820 ctcttaatca ataataaata actagatatg tgatcttgac gatcatacat gacatgatta 5880 acccgactcc tagtacgagg tgattattaa tttaataata tctgttttat gaaggagtcg 5940 gtatgct 5947 // |
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