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EBI DbfetchID X80666; SV 1; linear; genomic DNA; STD; PLN; 6105 BP. XX AC X80666; XX DT 20-APR-1995 (Rel. 43, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE C.xantiana PgiC1 gene XX KW glucose-6-phosphate isomerase. XX OS Clarkia xantiana OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC Myrtales; Onagraceae; Clarkia. XX RN [1] RX AGRICOLA; IND20466557. RX DOI; 10.2307/2419446 RA Ford V.S., Thomas B.R., Gottlieb L.D.; RT "The same duplication accounts for the PgiC genes in Clarkia xantiana and RT C. lewisii (Onagraceae)"; RL Syst. Bot. 20(2):147-160(1995). XX RN [2] RP 1-6105 RA Gottlieb L.D.; RT ; RL Submitted (26-JUL-1994) to the EMBL/GenBank/DDBJ databases. RL L.D. Gottlieb, University of California at Davis, Section of Evolution & RL Ecology, Division of Biological Sciences, Davis CA 95616, USA XX FH Key Location/Qualifiers FH FT source 1..6105 FT /organism="Clarkia xantiana" FT /mol_type="genomic DNA" FT /clone_lib="Charon35" FT /clone="X6" FT /db_xref="taxon:3938" FT CDS join(193..243,326..402,555..636,721..768,1141..1296, FT 1399..1495,1658..1700,1940..2007,2087..2171,2537..2585, FT 3052..3124,3252..3312,3704..3770,3901..3957,4045..4098, FT 4190..4318,4775..4838,4923..4996,5089..5142,5226..5294, FT 5438..5527,5611..5718,5810..5860) FT /gene="PgiC1" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /db_xref="GOA:P54240" FT /db_xref="InterPro:IPR001672" FT /db_xref="InterPro:IPR018189" FT /db_xref="UniProtKB/Swiss-Prot:P54240" FT /protein_id="CAA56693.1" FT /translation="MASPALISETEAWKDLKAHLEGIKMIHLRELMGDTERCQSMMVEF FT DNIFLDYSRQQASPDTISKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPR FT NSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLF FT VHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETML FT NARTLREWISSALGPSAVAKHMVAVSTNLPLVEKFGIDPNNAFAFWDWVGGRYSVCSAV FT GVLPLSLQYGFAVVEKFLQGAHSIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAI FT LPYSQALEKLAPHIQQVSMESNGKGVSIDGLPLPFESGEIDFGEPGTNGQHSFYQLIHQ FT GRVIPCDFIGIVKSQQPVYLKGEVVNNHDELMSNFFAQPDALAYGKTPEQLKNENVSEH FT LIPHKTFTGNRPSISILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKS FT LATQVRKQLHASRVKGEPVEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI" FT exon 193..243 FT /number=1 FT exon 326..402 FT /number=2 FT exon 555..636 FT /number=3 FT exon 721..768 FT /number=4 FT exon 1141..1296 FT /number=5 FT exon 1399..1495 FT /number=6 FT exon 1658..1700 FT /number=7 FT exon 1940..2007 FT /number=8 FT exon 2087..2171 FT /number=9 FT exon 2537..2585 FT /number=10 FT exon 3052..3124 FT /number=11 FT exon 3252..3312 FT /number=12 FT exon 3704..3770 FT /number=13 FT exon 3901..3957 FT /number=14 FT exon 4045..4098 FT /number=15 FT exon 4190..4318 FT /number=16 FT exon 4775..4838 FT /number=17 FT exon 4923..4996 FT /number=18 FT exon 5089..5142 FT /number=19 FT exon 5226..5294 FT /number=20 FT exon 5438..5527 FT /number=21 FT exon 5611..5718 FT /number=22 FT exon 5810..5860 FT /number=23 FT intron 244..325 FT /number=1 FT intron 403..554 FT /number=2 FT intron 637..720 FT /number=3 FT intron 769..1140 FT /number=4 FT intron 1297..1398 FT /number=5 FT intron 1496..1657 FT /number=6 FT intron 1701..1939 FT /number=7 FT intron 2008..2086 FT /number=8 FT intron 2172..2536 FT /number=9 FT intron 2586..3051 FT /number=10 FT intron 3125..3251 FT /number=11 FT intron 3313..3703 FT /number=12 FT intron 3771..3900 FT /number=13 FT intron 3958..4044 FT /number=14 FT intron 4099..4189 FT /number=15 FT intron 4319..4774 FT /number=16 FT intron 4839..4922 FT /number=17 FT intron 4997..5088 FT /number=18 FT intron 5143..5225 FT /number=19 FT intron 5295..5437 FT /number=20 FT intron 5528..5610 FT /number=21 FT intron 5719..5809 FT /number=22 XX SQ Sequence 6105 BP; 1670 A; 1130 C; 1146 G; 2159 T; 0 other; aaaaatgctg cttttattgc taatttgatt gctcaaatga cattgaagat aaatctaaat 60 tatttttgga aagagcagat gcaattgaga atgagagtct agctcactct ttatgtatac 120 atgatctatt gagttatctc tggcactaat ttcttgctgt tgtttcttct gaagcgattt 180 agtgcaagtc taatggcttc gccagctttg atcagcgaaa ctgaggcatg gaaggatttg 240 aaggtatgta tttgctttta gtctgggaca ctaactcggc tagtaatgtc tggctgtaaa 300 tttgaacctc attacgaacc tgcaggctca tctcgagggc ataaaaatga ttcatctgcg 360 ggaattaatg ggagacactg aaagatgcca gtcgatgatg gtgtatgtat ttttcatgga 420 ctgagctctg ttattgtttc cttctcttct tgtagggtga agcgaattaa actacaatct 480 gtaatgaata attcagttct gtatgcagtc ccgtgcctat tttaagcttt gcgtatatct 540 gtttactgtt gtagtgagtt cgacaacata ttcttggact actcacggca gcaagcctct 600 cctgatacaa ttagtaagct ctacaagcta gcagatgtaa gcacgtctct gttgctagtt 660 cagtactgat catgtgtttt aagggaaaca tttccctgat gttgacttga tcttttacag 720 gcagctcatc tcaagcagaa gattgacaga atgtataatg gtgaccatgt aagttttgac 780 taattattgc tgatttagtc catctgcctt ttgctttgct ttgatttgca cctgctacgt 840 gctgaccagt gtaaccactg tctctctagc tgtcaagttt gatttgttcc ttagatatca 900 tggggaaata taacttgtat tgctccttcc gcttcttgac agcttggcat atccattttc 960 ttgaatttta agagtgaaat atatgccttt gtctaagtaa atgttaacat taagtatcag 1020 tttaaactgg ctatattgtt tttaatcttt tactagaacc acgggagtga tagaagagtt 1080 gggctgttgc tcttatatat tcaaaacctg ttaataaaat agctttcctt ggcctggcag 1140 attaacagta cagaaaacag gtcggtacta catgtcgctc ttcgagctcc aaggaattca 1200 gctatatgca gtgatggaaa gaatgtggtt ccagatgttt ggaatgtact tgacaagatc 1260 aaagacttct cagatagagt tcgcaatggt tcatgggtaa aatacagctc ctatagtcct 1320 agttgaattt gattagggat tttaagttcc gaaatcattg agttcatcta atctcgaata 1380 attgaccaca tttggtagat cggggccaca gggaaagaac taaaggatgt tattgctgtt 1440 ggtattggtg gcagcttcct cggtcctctg tttgtccaca cggcacttca aacaggtacc 1500 gtatcagaca cttataatga tgaactgtgt gattatcttt tatttgtctt ctaaagatgg 1560 tagctagatt caactgtacc atctaattct tgaaaggctc ttctattgtt gggtttaaaa 1620 aagagtagaa gtttatacct tttgtggaaa cttgcagatc cagaggccag taagaatgct 1680 agaggccgtg agctgcgttt gtaagtctca gctactgtca atgcatcgtt attttctttt 1740 ttgtggtttc catgattatt aactgtagaa actaaatgga tattaaaggc cataatgttc 1800 agttgacaat tatcatatcc tctttgcgaa tatactcttt gagctccctt tgaaaatact 1860 ggcatgcaca gtcatccaag cgtacttaaa attgagtatt ttctttatgg aagcttgacc 1920 tattattctg tttgtgcagt ctggcaaatg ttgaccctat tgacgttgca aggaacatct 1980 ccggtttaaa cccagaaact acccttggta attgtctctc gttatgctgg ttttaggtat 2040 cgtttctatt ttggcttttg tttgatgatc ttaatcttgc ctgcagttgt cgttgtttca 2100 aagactttta caacagcaga aacaatgctc aatgctcgaa ctttgaggga atggatatct 2160 tctgctctcg ggtttgtctc catactgctt acttttttgg tagcttttac ataattacgg 2220 agcagacggg tacaagattc agtaccataa tgtaactttt ggcaattctg gaagctaaat 2280 gatatagatt ttcagtgtgc aacttcatcc atgcagctat ggcaatccca tagctgcaac 2340 actagaaaac agtctagaaa cttttgcaga tattgttgtc cagtatctta ataaatcact 2400 actagttttt cttagtattg cagcattgaa atttcagatg cgcctttgat atatcccaac 2460 ttttaacatt aaaagaagat atattctctc tctctctctc tctctctgat caaagtcatt 2520 ataatgttgg ttacagccct tctgccgttg caaagcacat ggttgcagtc agtacaaatc 2580 ttccggtatg tttgctcttt catatatttt tttcttgaca tccttcaggt ctaattttta 2640 ctggtattct ccaattataa gcacatgtct atcttgttat aatatgcttt gaatcttctt 2700 gatgcctctt caaataagcc agcatgggaa cttagaaaga atgatttatt caagcatctc 2760 tttctgcaca taattaatta aattgtccat aggaagttag gttttctttt ttgaagaagt 2820 aaattctctg actgctcata ttgtatatga taggcctatc accatgtata ttatttatgc 2880 taaatatcgg aagcagtatc tgtctagcta tgcagtttca tttggtgagc tggtagacta 2940 ttgagattcg acattctacg attagttagg tggactatca gggggtgttt acccaataat 3000 ttctgtgatg gagctgttta cttacctgga tctcgtatgc ttcttctgca gcttgttgaa 3060 aagtttggca ttgatcctaa caatgctttt gcattttggg attgggttgg tggccgatat 3120 agtggtaagc tatccttttt ttacttaatc ccatagactt aattcaaata attttgcatg 3180 gatcgtttga gctattcctt gtgtctcccc tgtggaatac ttatatcttt acatctatat 3240 tcttgtggca gtctgtagtg ctgttggagt gttgccatta tctcttcagt atggctttgc 3300 tgttgtggag aagtatgtaa acctatcatt tcacacataa tatcaatttt cttctggctt 3360 tccatgtcgt caatacatcc aatcgtttcc attgacattt aatttttatt ttctggaaag 3420 cttctggaag ttccaaaaga taaagaatat gtttggtaaa atatacatgt atataatata 3480 tacattctct ggaaacactc ttcttcaatg gaatacataa acaattaaca aacaccagag 3540 aggagtgtag acattttagg agtagatgcc ttgtagatag agagcaggaa aattgtttgt 3600 cgtcttcgaa aagtatagtt catatatact gcttactatt atggagttga ctaatttttt 3660 ttaatgagcg gtcatagtaa aatgttgtaa attctttatg aagattcttg caaggggctc 3720 acagcattga tcagcatttc tcttctgcac catttgagaa aaatatacct gtaagttcca 3780 ttgatacact tctatttcta tagtaatgct tggatacaca agttgatgtt tagttatttc 3840 agccatacct tcttttataa gtttgatgac aaatttgaat tgattgaatc tttaatacag 3900 gtacttctag gtttgttgag tgtatggaat gtatcatttc ttggataccc tgcaagggtg 3960 agttcacatg atatgcttga ggcattattt tctccttttt agtagtcttt aatccactcc 4020 actgaaataa tcgattcttt ctaggccatc ttaccatact cccaagcact ggagaaattg 4080 gctccacata tacaacaggt atgctagcga tcacatttct ttctcagtaa tgattatctt 4140 ggaactggaa acgaagttag ctttgtctct tcatgatgtg actttacagg tcagcatgga 4200 gagcaacggc aagggtgtgt ccatagatgg tttgcctctt ccctttgagt ctggtgaaat 4260 tgactttggt gaaccaggta caaatgggca gcacagtttt taccagttga ttcaccaggt 4320 aacttcctta ctatctcagg tagccatgta tcagtttctc catatttatc cttaaattat 4380 tctacttcat ccagaattaa gatactaata taggaatacc ttgtattcaa ttccctcgta 4440 tgtgcattgt ggattgtgtc cattttattc tcagctaatt ttgaactaaa acttcaaaat 4500 ttgtcccttc aagcaaaaaa aaaaaaaaaa aaaaactact acaaagatct ggacctttca 4560 ccatgctcac aagccaattg cgagttgtgt tcttgtttag ccaactccct ttctcatcct 4620 atatgtgatt aggactacta ctcaaattca ccatttgatg atttcttcaa aatgttcagt 4680 ttcacaaatc catttcttca ctaatttagt tgaggctgaa ttaagcaaag tccactgaat 4740 ttctgtttgc taacacacgc atcttgaata acagggccgt gtcattccct gcgattttat 4800 cgggatcgtg aagagtcagc aacctgttta cctcaaaggt gaaaattgca tctggagcta 4860 gttatatttc taacaaggct ttatattcct acactacatc agttatttca ctatttctgc 4920 aggtgaagtg gttaataacc atgatgaact gatgtccaat ttttttgccc agcctgatgc 4980 tttggcatat ggcaaggtaa ctcctaatcc atctgcgata gctagctttc aaatccgctc 5040 tttaaaatta ccatgaaact taactgcata caattgttgt tgctttagac cccagaacaa 5100 ctaaagaatg agaatgtttc agagcatctt attcctcaca aggtattact ctgatttggg 5160 gaattcaaca tcttattcca ccatatcaag cttatattaa ttaattgttg tgtcatatta 5220 tgcagacatt cactggtaat aggccatcta ttagcattct tcttccaaca ttggatgctt 5280 accgtattgg acaggtctgt atgtccatct gtttgttgtg tgcttcaaac tataacctcc 5340 cttaattccc gaaacatttc cttttagaaa tagttctcta atcaatttgt tgaggatata 5400 gatactgaat ggtgtgttac tgtttctgca ctgtcagctg ttggcaattt atgaacatag 5460 agttgcagta caaggtttcg tatggggcat caactcattt gaccagtggg gagtggagtt 5520 aggaaaggtg aagtaccact caaaatacgg ttctttgcga taacttatcg gtttcatttc 5580 gttgtggtct taatctgtta tttgttgcag tctctggcaa cacaagtccg aaagcaactc 5640 catgcatctc gagtcaaggg agaacctgtg gagggtttca acttcagcac taaaaccttg 5700 ttaacaagat acctcgaggt atttatctgg ctaaaccaaa cacgcctagt ctttctttgc 5760 tgaatctaaa tgtagttaat taagcttaat cttattctct catgtacagg caacttccga 5820 tgtccccgcc gatccttcca ccctgctgcc taacatatga atatgctgct tttcgatttt 5880 ttgaagacgg atagatgtta tccgtagagt tgtgatcttc tttttccttt ctgggcttta 5940 attgctgttc ataatatgaa actatactgc agcaatctct tcactctctc ttgtatctgg 6000 aatccaatac ctttggggtt gtatgaattc ttaatcaata ataacagaag agaggatatt 6060 attcttaatg taataataat tgttttatga gggagccggt atgct 6105 // |
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