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EBI DbfetchID X80475; SV 1; linear; genomic DNA; STD; PRO; 2725 BP. XX AC X80475; XX DT 01-DEC-1994 (Rel. 42, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 4) XX DE E.carotovora expR gene XX KW expR gene. XX OS Pectobacterium carotovorum OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pectobacterium. XX RN [1] RX DOI; 10.1094/MPMI.2000.13.4.384 RX PUBMED; 10755301. RA Andersson R.A., Eriksson A.R.B., Heikinheimo R., Mae A., Pirhonen M., RA Koiv V., Hyytiainen H., Tuikkala A., Palva E.T.; RT "Quorum sensing in the plant pathogen Erwinia carotovora subsp. carotovora: RT the role of expR(Ecc)"; RL Mol. Plant Microbe Interact. 13(4):384-393(2000). XX RN [2] RP 1-2725 RA Heikinheimo R.; RT ; RL Submitted (21-JUL-1994) to the EMBL/GenBank/DDBJ databases. RL R. Heikinheimo, Swedish University of Agricultural, Sciences, Dept of RL Molecular Genetics, Box 7101, 75007 Uppsala, SWEDEN XX DR GOA; P33882. DR GOA; P55743. DR GOA; P55744. DR InterPro; IPR001690; Autoind_synth. DR InterPro; IPR011050; Pectin_lyase_fold/virulence. DR InterPro; IPR012334; Pectin_lyas_fold. DR InterPro; IPR016181; Acyl_CoA_acyltransferase. DR InterPro; IPR018040; Pectinesterase_AS. DR InterPro; IPR018311; Autoind_synth_CS. DR UniProtKB/Swiss-Prot; P33882; EXPI_PECCC. DR UniProtKB/Swiss-Prot; P55743; PMEB_PECCC. DR UniProtKB/Swiss-Prot; P55744; ASSY_PECCC. XX FH Key Location/Qualifiers FH FT source 1..2725 FT /organism="Pectobacterium carotovorum" FT /isolate="SCC3193" FT /mol_type="genomic DNA" FT /clone="pTK806" FT /sub_clone="pTK806-1" FT /db_xref="taxon:554" FT CDS 939..1676 FT /transl_table=11 FT /gene="expR" FT /db_xref="GOA:Q47189" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR005143" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/Swiss-Prot:Q47189" FT /protein_id="CAA56646.1" FT /translation="MSQLFYNNETISRIIKSQFDMALSHYGDIKYAYMVLNKKKPTEIL FT IISNHHDEWREIYQANNYQHIDPVVIAALNKITPFPWDEDLLVSTQLKMSKIFNLSREH FT NITNGYTFVLHDHSNNLVMLSIMIDESNVSNIDDVIESNKDKLQMTLMTIHAETISLYR FT EMIRNKEDERSNDKDIFSQRENEILYWASMGKTYQEIALILDIKTGTVKFHIGNVVKKL FT GVLNAKHAIRLGIELQLIRPVQS" XX SQ Sequence 2725 BP; 861 A; 572 C; 534 G; 758 T; 0 other; gtcgactcta gaggatcggg cgtcaggata catttttcgt taatactagt aacctccgca 60 acgagtacgt cacagaccgc tacagccgcg cctacattaa agacagttac attgaaggtg 120 atgtcgatta tgtttttggc cgggcgaccg cagtattcga tcgcgtccac tttcacacgg 180 tttccagtcg cggcgcaaaa gacattcatg tttttgcacc tgacagcatg ccgtgggcgc 240 aatacggttt tctggcggta agttgccgct ttacgggaga cgaaggcttc agtgggggaa 300 gaaaggccaa actgggacgc gcctgggatc agggggcaag gcagacagga taccagccca 360 acaagacggc aaatggccag ctagtcattc gtgacagtac gattgacgcc agctatgaca 420 gagaacaacc ttggggagtc gctgcaacta ccgcgcggcc ttttgcaggt aacgtggatt 480 cagcccgtaa tctggatgat gtgcaattca atcggctgtg ggaatacaac aatatcgacg 540 aggtgtgatg tgcagcgaag gaatacataa tattcaaggt ggatgcggct cgtgaaaaca 600 tcacattgat ataactcatg ccattgaaat ttgatcggcc tgtaaaacaa tacaggccat 660 agaaaagaaa aattattttt tattatatta ctgataaatc tcgcttaatt agcattccct 720 gatgtcagcc aatcatcacg cttatcctga gcgatgttta tttcttttgc tttacgctct 780 taacaacgtc gtaagatttt atgttttttc acctcaaaga aaagctatac taaagtatag 840 ttaaggctat ctatataggt tactatggat atacgtatag ggatgggtat atactttttc 900 tattacagga tgttgaattt tcaggcagag gtcatgagat gtcgcagtta ttctacaaca 960 atgaaactat aagcaggata ataaaaagtc aattcgatat ggcattaagc cactacggtg 1020 acatcaaata tgcctacatg gtgttaaata aaaagaagcc aacagagatt ttgattattt 1080 ccaatcacca tgatgagtgg cgagagatat accaagcaaa taactaccag cacattgatc 1140 ctgtggtcat tgcagccctt aataaaatca cgcctttccc ttgggacgaa gatttacttg 1200 tcagcacaca actgaagatg tcaaagatat ttaacttatc cagagagcat aacatcacca 1260 acggctacac ttttgttctt catgaccaca gtaacaatct ggttatgctg tcaatcatga 1320 ttgatgaatc taatgtaagt aacatcgatg acgtaatcga gagtaataaa gataagttac 1380 aaatgacgtt gatgactatt catgcagaaa ccatctctct ttacagagag atgattagaa 1440 acaaggaaga tgaaagatcg aatgataaag atattttttc tcaacgggaa aatgaaattc 1500 tttattgggc cagtatgggt aaaacctatc aggagatagc actgatatta gatattaaaa 1560 caggcaccgt taaatttcac atcggcaatg ttgtgaaaaa actcggcgta ttaaatgcca 1620 aacatgcgat cagacttggc atcgagctac aacttatccg accggttcag tcataggctc 1680 gaaagacagt ggccactctc gcaacttact ttcaacaaat tcctgattgt gatttatacg 1740 acgaactagc acatcctggc tttcattatc gacaggtaaa aaaagtagat aaaccctttc 1800 gtgtttttct gacataccct gttcaacaat cgaaattttc caaccagaac gttttagtat 1860 tgtgagcata ggatgactga caatcgtata aacaccatca tatcctttac tctttgagta 1920 attcaccgtt gccaagaaga acatcgtact aacgggataa gaatttccta gaatagtttt 1980 tgaccgcgct ttatctacaa aaaaccggct cgactcgata tacttccctt ccggaatatc 2040 tattttttca aaataaggga aaaacgttcc agtaatcata ttaggatatt tcgtttcaat 2100 tagccgagaa ctgcaaataa cctgatcacc ctctacaccg aaaagataag tcgcattatc 2160 atcatcatac tgatcgaatt ccatcccgtt aatacatttt accgcccaat tcagcctatc 2220 cttgaacgtt tctttcctaa gcgtaaacaa ttcttccgat tttttttccg acagtagtgt 2280 gtagcttaca tcgaatattt ctaacatttt tcctccatta aaaatttgca gctagacatc 2340 aaaaaacaga tagaccatcc aatagactct ttcgcctttt aacaaaaacc taggcttatt 2400 gttattgtat tctgtcgctt tccacgatag ttgtacagat gcaacctgca ttgtcagcaa 2460 gagttcacac acgaaaaaaa atcgcaagaa aatcaaacat aaacataggg taaacagata 2520 aaaaaaatcc ggaacgcgag gcggttccgg atttttatat aacctaatct gtgcgttact 2580 tctctgcttt atcctgcaat tgcccgactt gcggcaaacc ggtgctggca gaagaagaaa 2640 gcaagcctgt ttcagcatag ttaaacagtt tttcacgcgt gtccgtaata tccaggttgc 2700 gcatggtcaa ctggccaata cgatc 2725 // |
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