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EBI DbfetchID X76083; SV 1; linear; genomic DNA; STD; PRO; 3140 BP. XX AC X76083; XX DT 25-NOV-1993 (Rel. 37, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 10) XX DE B.caldolyticus (DSM405) pyrR, pyrP and pyrB (partial) genes. XX KW pyr-operon; pyrP gene; pyrR gene. XX OS Bacillus caldolyticus OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-3140 RA Neuhard J.; RT ; RL Submitted (11-NOV-1993) to the EMBL/GenBank/DDBJ databases. RL J. Neuhard, University of Copenhagen, Inst. Molecular Biology, Dept of RL Biological Chemistry, Solvgade 83, 1307 Copenhagen, DENMARK XX RN [2] RP 1-3140 RX PUBMED; 8206848. RA Ghim S.Y., Neuhard J.; RT "The pyrimidine biosynthesis operon of the thermophile Bacillus RT caldolyticus includes genes for uracil phosphoribosyltransferase and uracil RT permease"; RL J. Bacteriol. 176(12):3698-3707(1994). XX DR CABRI; DSM 405. DR RFAM; RF00515; PyrR. XX FH Key Location/Qualifiers FH FT source 1..3140 FT /organism="Bacillus caldolyticus" FT /strain="DSM405" FT /mol_type="genomic DNA" FT /db_xref="taxon:1394" FT promoter 603..631 FT misc_signal 674..755 FT /note="antiterminator 1" FT attenuator 740..764 FT /note="number=1" FT CDS 791..1330 FT /transl_table=11 FT /gene="pyrR" FT /product="uracil phosphoribosyltransferase" FT /db_xref="GOA:P41007" FT /db_xref="InterPro:IPR000836" FT /db_xref="PDB:1NON" FT /db_xref="PDB:1XZ8" FT /db_xref="PDB:1XZN" FT /db_xref="PDB:2IGB" FT /db_xref="UniProtKB/Swiss-Prot:P41007" FT /protein_id="CAA53696.1" FT /translation="MQKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYL FT ARRLAERIEQIEGASVPVGELDITLYRDDLTVKTDDHEPLVKGTNVPFPVTERNVILVD FT DVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVV FT ELSEVDGIDQVSIHEK" FT misc_signal 1355..1421 FT /note="antiterminator 2" FT attenuator 1401..1430 FT /note="number 2" FT CDS 1490..2788 FT /transl_table=11 FT /gene="pyrP" FT /product="uracil permease" FT /db_xref="GOA:P41006" FT /db_xref="InterPro:IPR006042" FT /db_xref="InterPro:IPR006043" FT /db_xref="UniProtKB/Swiss-Prot:P41006" FT /protein_id="CAA53697.1" FT /translation="MNKPVLDIQDRPTVGQWITLSLQHLFAMFGATILVPYLVGLDPSI FT ALLTSGLGTLAFLLITKWQVPAYLGSSFAYIAPIIAAKTAGGPGAAMIGSFLAGLVYGV FT VALIIKKAGYRWVMKLLPPVVVGPVIIVIGLGLAGTAVGMAMNGPDGKYSLLHFSVALV FT TLAATIVCSVLARGMLSLIPVLVGIVVGYLYALAVGLVDLSKVAAAKWFEWPDFLIPFA FT DYPVRVTWEIVMLMVPVAIVTLSEHIGHQLVLSKVVGRDLIQKPGLHRSILGDGTATMI FT SALLGGPPKTTYGENIGVLAITRVYSVYVLAGAAVIAIAFGFVGKITALISSIPTPVMG FT GVSILLFGIIASSGLRMLIDSRVDFGQTRNLVIASVILVIGIGGAVLKISDSFQITGMA FT LSAIVGVLLNLILPGRPQAAENLFEENQSDHVA" FT misc_signal 2830..2904 FT /note="antiterminator 3" FT attenuator 2898..2912 FT /note="number 3" FT CDS 2958..>3140 FT /transl_table=11 FT /gene="pyrB" FT /db_xref="GOA:P41008" FT /db_xref="InterPro:IPR002082" FT /db_xref="InterPro:IPR006130" FT /db_xref="InterPro:IPR006131" FT /db_xref="InterPro:IPR006132" FT /db_xref="UniProtKB/Swiss-Prot:P41008" FT /protein_id="CAA53698.1" FT /translation="MTHLFALSELPLDEIHRLLDEAERFRSGRIWRPAAPMYVANLFFE FT PSTRTKCSFEMAERKL" XX SQ Sequence 3140 BP; 643 A; 877 C; 944 G; 676 T; 0 other; cccgggcata tgcgcggcac gcttgtcaac gcgcttctcg cccattgccg cgacctgtct 60 gggatcaacg gcgtgcttcg ccccggcatc gtccatcgga ttgacaaaga cacatcagga 120 ctattgatgg tggcgaaaaa cgacgccgcc caccgctcgc tcgtcgagca gcttgtgaac 180 aaaacggtga cgcgccgcta caaggcgatc gtccacggcg tcattccaca cgattacggg 240 acgatcgacg cgccgatcgg ccgcgacaag cgcgatcgaa agaaaatggc cgtcaccgag 300 gaaaacggca aggaagccgt cacccatttc cgcgtgctcg agcggtttcg ccattatacg 360 tatgtggagt gccagctgga aacggggcgg acgcaccaaa ttcgcgtcca tatgaaatac 420 atcggctatc cgctcgctgg cgacccgcaa tacgggccga aaaaaacgct cgccatcgac 480 ggccaggcgc ttcacgccgg ggtgctcggc ttccgtcatc cgagaagcgg cgagtatttg 540 gaattcgaag cgccgttgcc gccggagttt gccgagctgc ttgactggct gcgaaaaaac 600 gattgacaaa cgaacacgcc ccctttacaa tgaaaacagg tgaacaggaa cctttaagtt 660 cagtcctgtg aggctgaaaa ggggtcggaa tgacaaagaa gggcgatgta tgcccatctt 720 gtttggtgat aagcgcgcca tcccccgctt cacaggcggg ggattttttg tgccaacgga 780 ggtggcttgt atgcaaaagg cggtcgtgat ggacgaacag gcgattcgcc gcgctttgac 840 gcgcatcgcc cacgaaatca tcgaacgaaa caaaggcatt gacggctgcg tgcttgtcgg 900 aattaaaacg cgcggcattt acttggcgcg ccgcttggcg gagcggatcg agcaaattga 960 aggggcgtcc gttcccgtcg gtgagcttga catcaccttg taccgcgacg atttgaccgt 1020 gaagacggac gaccatgaac cgcttgtgaa aggaacgaat gtgccgtttc cggtgaccga 1080 gcggaatgtc attttagttg atgacgtgct cttcaccggc cggacggtgc gggcggcgat 1140 ggatgcggtc atggatttgg gccgcccggc gcgcatccag ctcgccgtgc ttgttgaccg 1200 cggccacagg gaactcccga tccgcgctga tttcgtcggc aaaaacgtgc cgacctctcg 1260 ttcggaactg atcgtcgtgg agctttcgga agtggacggc atcgatcaag tctccattca 1320 tgaaaaatag cgaagcgacc cttttaagcg cagtcccgtg aggctgcaaa aggggcggaa 1380 tcgtttcggc tgtttctgca ccctctttgc gtcttcgcgg gcaaagaggg atttttttgt 1440 gcacactaga aagcaagcct cgctcatttg atcaaaggag tgacgaaaga tgaacaaacc 1500 ggtgttggac attcaagacc gcccgactgt tgggcaatgg atcaccttaa gccttcagca 1560 tttattcgcc atgttcgggg cgacgatttt agtgccgtac ttagtcggct tagatccgtc 1620 gatcgccttg ctcacaagcg ggcttggaac attggcgttt ttgctcatta cgaaatggca 1680 agtgccggcg tatcttggct cgtcgttcgc ctacattgcg ccgatcatcg cggcgaaaac 1740 ggctggcggc ccgggagcgg ccatgatcgg cagcttcctc gccggattgg tgtacggggt 1800 tgtcgccctc atcattaaaa aagccggcta ccgctgggtg atgaaactgt tgccgccggt 1860 tgtggtcggc ccggtcatca tcgtcatcgg cctcggcttg gccgggacgg cggtcgggat 1920 ggcgatgaac ggcccggacg gcaaatacag cttgctccat ttctcggtgg cgctcgtgac 1980 gctcgcggcc acgatcgtct gctccgtgct cgcgcgcggc atgttgagct tgattccggt 2040 gcttgtcggc attgtcgtcg gctatctcta cgcgttggcg gtcgggctcg tcgatttgtc 2100 gaaagtggcg gcggcgaaat ggttcgaatg gccggatttc ttgatcccgt ttgccgatta 2160 tccggtgcgc gtcacatggg agatcgtgat gctcatggtg ccggtggcga tcgtcacctt 2220 gtccgagcat atcggccacc agctcgtctt aagcaaagtc gtcggccgcg acctcattca 2280 aaaaccgggg ctgcaccgct cgattttagg ggacggaacg gcgacgatga tctccgcctt 2340 gcttggcggt ccgccgaaaa cgacgtacgg ggaaaacatc ggtgtgctgg cgatcacccg 2400 cgtctacagt gtctacgtgc tggccggcgc ggcggtcatc gcgatcgctt tcggcttcgt 2460 cggcaaaatc acggcgctga tcagctcgat tccgacgccg gtcatgggcg gtgtgtcgat 2520 cttgctgttt ggcatcatcg cctcgtccgg actgcgcatg ttgatcgaca gccgcgtcga 2580 tttcggccag acgcgcaatt tagtcatcgc ctcggtcatc ttggtcatcg gcatcggcgg 2640 agcggtgctg aaaatcagcg acagcttcca aattaccggg atggcgctct cggccattgt 2700 cggcgtcctc ctcaacttga ttttgccggg gcgtccgcaa gccgcggaaa acctatttga 2760 agaaaaccag agcgaccatg tcgcctaata ggagaaagca ccttttaatt aagtcccgcg 2820 aggcttaaaa aggtgtgaaa acaggcgcat ccagggccgg agtgcacctt cttcggctct 2880 gccatgcgcc gatcgtcaca ccttgcctgg ccggcaaggt gttttttttc gcgaaaaaac 2940 gaaaaggagc gagaccgatg acccatcttt tcgcattaag tgaactgccg cttgatgaaa 3000 tccaccgttt gctcgatgaa gcggaacggt tccgcagcgg gcgcatctgg cgcccggcgg 3060 cgccgatgta cgtcgccaac ttgtttttcg aaccgagcac gcgcacgaaa tgcagcttcg 3120 agatggcgga acggaagctt 3140 // |
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