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EBI DbfetchID X70925; SV 1; linear; genomic DNA; STD; PRO; 2995 BP. XX AC X70925; XX DT 10-JUL-1995 (Rel. 44, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 4) XX DE P.acidilactici gene for d-lactate dehydrogenase XX KW 30S ribosomal protein; D-lactate dehydrogenase; d-ldh gene; ldhD gene; KW rpsB gene. XX OS Pediococcus acidilactici OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Pediococcus. XX RN [2] RP 1-2794 RA Delcour J.; RT ; RL Submitted (15-FEB-1993) to the EMBL/GenBank/DDBJ databases. RL J. Delcour, Universite Catholique de Louvain, Unite de Genetique, Lab de RL Genetique Moleculaire, Place Croix du Sud, 5 (Bte 6), 1348 RL Louvain-la-Neuve, BELGIUM XX RN [4] RP 1-2995 RA Delcour J.; RT ; RL Submitted (09-FEB-1995) to the EMBL/GenBank/DDBJ databases. RL J. Delcour, Universite Catholique de Louvain, Unite de Genetique, Lab de RL Genetique Moleculaire, Place Croix du Sud, 5 (Bte 6), 1348 RL Louvain-la-Neuve, BELGIUM XX RN [5] RP 1-2995 RX PUBMED; 7539419. RA Garmyn D., Ferain T., Bernard N., Hols P., Deplace J.; RT "Pediococcus acidilactici ldhD gene: cloning, nucleotide sequence, and RT transcriptional analysis"; RL J. Bacteriol. 177(12):3427-3437(1995). XX FH Key Location/Qualifiers FH FT source 1..2995 FT /organism="Pediococcus acidilactici" FT /strain="DG302" FT /mol_type="genomic DNA" FT /db_xref="taxon:1254" FT CDS <1..637 FT /codon_start=2 FT /transl_table=11 FT /gene="y210" FT /db_xref="GOA:Q51439" FT /db_xref="InterPro:IPR002052" FT /db_xref="UniProtKB/TrEMBL:Q51439" FT /protein_id="CAA50273.1" FT /translation="NFAEVKQSSKAQIVDLCAGNGAVGLFLSKKTHGHVTMVEIQSRLA FT EMAERSILLNDLKERYRVLNLPLADSLGTIKTDSVDNIVCNPPYFPNHPDSKKNPNQFL FT AIARHEITTSSMKFETSQKMLKMNGKLFMVHRPDRLPEIINDFTQNRLAPKRIQFVHSH FT EGDEANMVLIEAIKDGRPNGVRILPPIITYDGLEYSPTVKEMLYGSTK" FT RBS 607..612 FT CDS 621..917 FT /transl_table=11 FT /gene="y98" FT /db_xref="GOA:Q51440" FT /db_xref="InterPro:IPR000305" FT /db_xref="UniProtKB/Swiss-Prot:Q51440" FT /protein_id="CAA50274.1" FT /translation="MEAPSENGFYFYVLWCADQTLYTGYTVNLKQRVARHNSGQGAKYT FT RVPKRRPVQLLYYESFENQHDAMSAEYFFKKQSRKEKLKYLKNNGVIVTTFSH" FT -35_signal 897..902 FT /gene="ldhD" FT -10_signal 921..926 FT /gene="ldhD" FT mRNA 934..1956 FT /gene="ldhD" FT RBS 944..951 FT /gene="d-ldh" FT CDS 961..1956 FT /transl_table=11 FT /gene="d-ldh" FT /product="D-lactate dehydrogenase" FT /EC_number="1.1.1.28" FT /db_xref="GOA:Q59642" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q59642" FT /protein_id="CAA50275.1" FT /translation="MKIIAYGIRDDEKPYLDEWVTKNHIEVKAVPDLLDSSNIDLAKDY FT DGVVAYQQKPYTADLFDKMHEFGIHAFSLRNVGLDNVPADALKKNDIKISNVPAYSPRA FT IAELSVTQLLALLRKIPEFEYKMAHGDYRWEPDIGLELNQMTVGVIGTGRIGRAAIDIF FT KPFGAKVIAYDVFRNPALEKEGMYVDTLEELYQQANVITLHVPALKDNYHMLDEKAFGQ FT MQDGTFILNFARGTLVDTPALLKALDSGKVAGAALDTYENEVGIFDVDHGDQPIDDPVF FT NDLMSRRNVMITPHAAFYTRPAVKNMVQIALDNNRDLIEKNSSKNEVKFE" FT -35_signal 1966..1971 FT /gene="rpsB" FT -10_signal 1989..1994 FT /gene="rpsB" FT mRNA 2002..2053 FT /gene="rpsB" FT RBS 2106..2111 FT /gene="rpsB" FT CDS 2120..2905 FT /transl_table=11 FT /gene="rpsB" FT /product="30S ribosomal protein" FT /db_xref="GOA:P49668" FT /db_xref="InterPro:IPR001865" FT /db_xref="InterPro:IPR005706" FT /db_xref="InterPro:IPR018130" FT /db_xref="InterPro:IPR020589" FT /db_xref="UniProtKB/Swiss-Prot:P49668" FT /protein_id="CAA50276.1" FT /translation="MSVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQK FT TVKLIDNAYNFVKDVAANDGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNW FT NTIQKRIKRLKDLKKMEEDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFV FT VDPRKEQIAIKEAQKLNIPVVAMVDTNTDPDQVDVIIPSNDDAIRAVRLITSKMADAVV FT EGRQGEDDEAVQQEEVAEGVSKDSLEDLKKTVEEGSNEE" XX SQ Sequence 2995 BP; 964 A; 556 C; 650 G; 825 T; 0 other; taatttcgcg gaagtaaagc aaagttccaa ggcacaaatt gttgaccttt gtgcaggaaa 60 cggagcggta ggactttttt tatctaaaaa aacccatggg catgtgacaa tggtagaaat 120 tcagtcacgt ttagcggaga tggccgagcg aagtatttta cttaacgacc ttaaagaacg 180 ctaccgcgtg ttgaacctcc cgcttgcaga ctcattagga acaattaaaa ctgacagcgt 240 tgataacatt gtttgcaacc cgccgtattt tccaaaccat ccggatagta aaaaaaatcc 300 taaccagttt ttggcaattg cccggcatga aataacgact tcctcaatga aatttgaaac 360 tagtcaaaaa atgttgaaaa tgaatggaaa actattcatg gtgcatcgtc ccgaccggtt 420 accggaaatt attaatgact ttacccaaaa tcgacttgct cctaaacgga ttcaatttgt 480 tcactcgcat gagggcgacg aagccaacat ggttttgatc gaagcaatca aggatggcag 540 gcctaatgga gttagaattt taccgccaat cattacttat gacgggcttg aatattcacc 600 aacagtaaag gaaatgttat atggaagcac caagtgaaaa cggtttttac ttctacgtgc 660 tctggtgtgc agatcagacg ttgtacacag gctacacggt taatttaaaa caacgggttg 720 cccggcataa ttctggtcaa ggcgctaaat atacccgggt tcctaaacgt cgtccggttc 780 agctgcttta ttatgaaagc tttgaaaacc agcatgatgc aatgagtgca gaatattttt 840 ttaaaaaaca aagccgcaaa gagaaactta aatatttaaa aaataatggg gtaatagtaa 900 ctactttctc acattagtgg tacatttata ttgattaaaa aagaaagggg taatattaca 960 atgaagatta ttgcttatgg aattcgtgac gatgaaaaac catatttaga cgaatgggta 1020 acgaagaacc atatcgaggt taaagcggtc cccgatttgt tagattctag taacattgat 1080 ttggcaaagg attacgatgg ggtagttgct taccaacaaa agccttacac cgctgattta 1140 tttgataaga tgcacgaatt tgggattcat gccttctcgc tgcgtaacgt cggacttgat 1200 aacgtacccg cagatgcact caagaaaaat gatatcaaaa tttcgaacgt accagcatat 1260 tctccaagag caattgctga attgtcagtc acccaactgt tagcattact ccgtaagatt 1320 cctgaatttg aatacaaaat ggctcatggc gattatcgtt gggaaccaga catcggtttg 1380 gaacttaatc aaatgaccgt tggggtaatt ggtaccggac ggattggccg tgctgcaatt 1440 gacattttta aaccatttgg cgcaaaggta attgcgtacg atgttttccg taatcctgca 1500 ttagaaaagg aaggcatgta tgtagatact ttagaagagc tttaccaaca agctaacgtc 1560 attactttac acgttccagc actaaaggat aattaccaca tgttggatga aaaggccttt 1620 ggtcaaatgc aagacggaac cttcatccta aacttcgcgc gggggacttt agttgataca 1680 cctgcacttt taaaggcgtt agatagtggt aaagttgctg gagctgcgct agatacttac 1740 gaaaacgaag tcggcatctt tgatgtcgat catggtgatc aaccaattga tgacccagtt 1800 tttaacgatt tgatgagtcg ccgtaacgta atgattacgc cacacgctgc cttctacacc 1860 cgcccagcgg ttaaaaacat ggttcaaatc gccttagaca acaaccggga cttaattgaa 1920 aagaattctt caaagaatga agttaagttt gagtaatttt tctgcttgaa atgagtttta 1980 aggtaaggta aaattgtact cgtcttatga ggccaaaaac acacttggtt ggaagtcaaa 2040 ggcgtgcttt gtgtaggttg acttacgaag tcctgcgacc gtagataacc aaggaggaaa 2100 aaactaggag gaaaataaca tgtctgttat ttcgatgaaa caattgcttg aagcaggtgt 2160 acatttcgga caccaaaccc gtcgctggaa ccctaagatg aagccattca tttttactga 2220 acgaaatggt atttacatca ttgatttgca aaagaccgtt aagttgattg acaatgctta 2280 caactttgtt aaagacgttg ctgcaaatga tggggttgtt ctttttgttg gtactaagaa 2340 acaagcacaa actgctatcg aagaagaagc aaaacgtgct ggtcaattct acgttaacca 2400 tcgttggtta ggtggaaccc ttactaactg gaacacaatc caaaaacgga tcaagcgttt 2460 gaaggatctt aagaagatgg aagaagatgg tacttttgac cgtctaccta agaaagaagt 2520 agcacttctt aacaagcaaa aagacaagct tgaaaaattc ttgggtggta tcgaagacat 2580 gccacacatt ccagatgtat tgtttgttgt tgaccctcgc aaggaacaaa ttgcaatcaa 2640 ggaagctcaa aaattgaata ttccggttgt agctatggtc gacaccaata ctgatccaga 2700 tcaagttgac gtaattattc catcaaatga tgatgctatc cgtgccgttc gtttgattac 2760 ttctaagatg gctgatgctg ttgttgaagg tcgtcaaggt gaagatgatg aagctgttca 2820 acaagaagaa gttgctgaag gcgtaagcaa agactccctt gaagacttga agaagacggt 2880 tgaagaagga agcaacgaag aataattctc acttaggctg ttgcgattta agaccttatg 2940 gcctgagatt tagcacagcc tttttacggt tcatgggtta agatttaatt attaa 2995 // |
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