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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X70036; SV 1; linear; genomic DNA; STD; PRO; 1570 BP.
XX
AC   X70036;
XX
DT   19-JAN-1993 (Rel. 34, Created)
DT   23-JUN-1993 (Rel. 36, Last updated, Version 12)
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DE   Photobacterium sp. alginate poly(ManA)lyase gene
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KW   alginate lyase; extracellular protein.
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OS   Photobacterium sp.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
XX
RN   [1]
RP   1-1570
RA   Duez C.M.;
RT   ;
RL   Submitted (12-JAN-1993) to the EMBL/GenBank/DDBJ databases.
RL   C.M. Duez, Centre D'Ingenierie des Proteines, Institut de Chimie B6,
RL   Universite de Liege au Sart Tilman, B4000 Liege, BELGIUM
XX
RN   [2]
RP   1-1570
RX   DOI; 10.1016/0378-1097(93)90249-2
RX   PUBMED; 8319887.
RA   Malissard M., Duez C., Guinand M., Vacheron M.J., Michel G., Marty N.,
RA   Joris B., Thamm I., Ghuysen J.M.;
RT   "Sequence of a gene encoding a (poly ManA) alginate lyase active on
RT   Pseudomonas aeruginosa alginate";
RL   FEMS Microbiol. Lett. 110(1):101-106(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1570
FT                   /organism="Photobacterium sp."
FT                   /strain="ATCC433367"
FT                   /isolate="SFFB080483Alg-A"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="BamHI"
FT                   /clone="E.coli TC4 (pAL-A3)"
FT                   /db_xref="taxon:660"
FT   sig_peptide     645..704
FT   CDS             645..1502
FT                   /transl_table=11
FT                   /gene="alxM"
FT                   /product="alginate poly(ManA) lyase"
FT                   /db_xref="GOA:P39049"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR014895"
FT                   /db_xref="UniProtKB/Swiss-Prot:P39049"
FT                   /protein_id="CAA49630.1"
FT                   /translation="MIKSNLVISSLAIVSSMSYAGVEFSNPSGQLGEPANYTQFANILS
FT                   ASELQISDPNGKKGNKEYFALDNDFTGIVNDNFYVDKQSQALVFKMANDHLRNELRVQK
FT                   NFRTDLPDHFYTLYANVEILHPLQSMANSTSKQNEITFLQVHNKGLDDQGTHNVPHPLL
FT                   RVVWKENNQGVKGHFWAITKNNAVICKGSFGKKNKDKEMCRADVAYSKIDLGPAPTDKG
FT                   TDFTITVGNKTLAIDVNGQRKVEKNIDYWRHLLSYFKAGVYNQFTQGESEAHFNQLRYQ
FT                   VNTP"
XX
SQ   Sequence 1570 BP; 491 A; 371 C; 305 G; 403 T; 0 other;
     ggtaccttgt tctttgacat accctaatga ttcataaaga cgctgcgcag agtgatttga        60
     ctcggccgtt tcaagcgcaa tccctttaac accatctcgc ttggcaaact ggcacgcgtg       120
     ttccatcaag gctttcgcca caccttgcct tctggctgac tcaactacat acaggtcatt       180
     cagttgccaa gtcctttggg ctgaaaccga tgaaaaattg ggataaagct gcgtaaaacc       240
     caatgcttct ccctgctcat caagggcaag aaaaataaca gattcttgat tttctatccg       300
     ttgacgaaga aacgcttcaa cccaattcta aatcgctttc ttgtcgataa aaaacacggt       360
     aagcatcaaa aataggaacc agtttgggca aatgacatgg taaggcttga ataatttcca       420
     tcttatgaac atcgctgtcg tgggcaagag tatcaggata ctcgcaaacc agcacagtcg       480
     cgataagcac actttctcga atgtgatttt tgtgaactaa caaatgccta aaccgagata       540
     aaaagtgcat gaacgcacac tttttagccc gctattttta tctttgaacg gggtgtgata       600
     aaaaataacc acttttgaaa tattataata caaaaggtcc tactatgata aaatcaaacc       660
     ttgtcatttc gagcttagcg atagtctcat caatgagtta cgcaggtgtc gaattttcta       720
     atccatcagg tcaactcggc gagcctgcca attacactca atttgccaat attctcagcg       780
     cttctgagtt acaaatttcc gatcccaatg gcaaaaaagg caataaagaa tactttgctc       840
     tcgataatga ctttaccggt attgtgaacg acaactttta cgtcgataaa caaagccaag       900
     cgctggtatt taaaatggct aatgatcact tgcgcaacga attgagagta caaaaaaact       960
     ttcgcaccga tttacccgat catttctata ctctttatgc caacgtcgaa atcctccatc      1020
     cactacaaag catggccaat tcaacgtcta aacaaaacga aattaccttc ttgcaagtgc      1080
     acaataaagg gttggatgat cagggcactc acaacgtgcc gcacccatta ctgcgcgtag      1140
     tgtggaaaga aaacaaccaa ggggtgaaag gccatttttg ggccataacc aaaaacaatg      1200
     ccgtgatctg taaaggcagc tttggtaaaa agaacaaaga caaagagatg tgccgcgctg      1260
     acgtagccta ttcaaaaatc gatctcgggc ctgcgccgac tgataaaggc acggatttca      1320
     ccattaccgt aggcaataaa acgctggcga ttgatgtcaa cggccagcgt aaggtcgaga      1380
     agaacatcga ttattggcgc cacttactca gctactttaa agccggggtc tataaccaat      1440
     ttactcaagg tgaaagtgaa gcgcatttca atcaactgcg ctatcaagtc aacacgcctt      1500
     aatcctagct tgaccctatt ttcccttctg gttgcttaac ctcctacgct ggccaaatcg      1560
     agtaacacgg                                                             1570
//
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