 |
|
EBI DbfetchID X67475; SV 1; linear; genomic DNA; STD; PRO; 2485 BP. XX AC X67475; S45616; XX DT 23-OCT-1992 (Rel. 33, Created) DT 28-NOV-2005 (Rel. 85, Last updated, Version 8) XX DE Erwinia chrysanthemi pelB and pelC genes for pectate-lyase XX KW extracellular enzyme; pectatelyase; pectinase; phytopathogenicity factor. XX OS Erwinia chrysanthemi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. XX RN [1] RX DOI; 10.1111/j.1365-2958.1992.tb01411.x RX PUBMED; 1406275. RA Hugouvieux-Cotte-Pattat N., Robert-Baudouy J.; RT "Analysis of the regulation of the pelBC genes in Erwinia chrysanthemi RT 3937"; RL Mol. Microbiol. 6(16):2363-2376(1992). XX RN [2] RP 1-2485 RA Hugouvieux-Cotte-Pattat N.; RT ; RL Submitted (21-OCT-1992) to the EMBL/GenBank/DDBJ databases. RL N. Hugouvieux-Cotte-Pattat, Inst. National des Sciences Appliquees, Lab de RL Genetique Moleculaire INSA, bat 406, 20 Ave Einstein 69621 Villeurbane RL cedex, FRANCE XX FH Key Location/Qualifiers FH FT source 1..2485 FT /organism="Erwinia chrysanthemi" FT /strain="3937" FT /mol_type="genomic DNA" FT /db_xref="taxon:556" FT CDS <1..207 FT /codon_start=1 FT /transl_table=11 FT /note="ORFX" FT /db_xref="GOA:Q47472" FT /db_xref="UniProtKB/TrEMBL:Q47472" FT /protein_id="CAA47820.1" FT /translation="VNLVGAGLHAVPQIQQIHVQQRAQYGVELTLLVGLKPGEMSPLLL FT HARGVGPQNSPSHHIVYAFSQNR" FT misc_feature 505..531 FT /gene="pelB" FT /standard_name="operator" FT /experiment="experimental evidence, no additional details FT recorded" FT promoter 530..558 FT /gene="pelB" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA 565..>1811 FT /gene="pelB" FT /experiment="experimental evidence, no additional details FT recorded" FT sig_peptide 684..749 FT /gene="pelB" FT CDS 684..1811 FT /transl_table=11 FT /gene="pelB" FT /product="pectate lyase" FT /EC_number="4.2.2.2" FT /db_xref="GOA:Q59419" FT /db_xref="HSSP:1AIR" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q59419" FT /protein_id="CAA47821.1" FT /translation="MKSLITPITAGLLLALSQPLLAATDTGGYAVTAGGNVTGAVSKTA FT TSMQDIVDIIAAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGV FT EIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMVRVDDSPNV FT WVDHNELFAANHECDGTPDGDTTFEAAVDIKGASDYVTVSYNYIHGVKKVGLDGSSNSD FT TGANITYHHNRYNDVNARLPLQRGGLVHAYNNLYSNVTSSGLNVRQNGQALIESNWFEN FT AVNPVTSRYDGKNFGTWVLKNNNITKPADFSTYSITWTADTKAYVNADSWTSTGTFPTV FT AYSYSPVSAQCVKDNLANYAGVGKNLATLTSARCK" FT mat_peptide 750..1808 FT /gene="pelB" FT /product="pectate lyase" FT misc_feature 2083..2130 FT /gene="pelC" FT /standard_name="operator" FT /experiment="experimental evidence, no additional details FT recorded" FT promoter 2108..2136 FT /gene="pelC" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA 2143..>2485 FT /gene="pelC" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 2323..>2485 FT /transl_table=11 FT /gene="pelC" FT /product="pectate lyase" FT /EC_number="4.2.2.2" FT /db_xref="GOA:Q79AJ0" FT /db_xref="UniProtKB/TrEMBL:Q79AJ0" FT /protein_id="CAA47822.1" FT /translation="MKSFIAPIAAGLLLAFSQSSLAATGGYATTSGGNVTGAVSKTAAS FT MQDIIDIID" FT sig_peptide 2323..2388 FT /gene="pelC" FT mat_peptide 2389..>2485 FT /gene="pelC" FT /product="pectate lyase" XX SQ Sequence 2485 BP; 632 A; 707 C; 625 G; 521 T; 0 other; gttaacctgg taggcgccgg gctccatgct gtcccccaga ttcagcagat tcatgtccag 60 caacgggcgc aatacggcgt cgaactcacc ctgttggttg gtctgaaacc cggcgaaatg 120 tcgccgctgc tcctccatgc gcgcggtgta ggcccgcaaa attcgccttc gcaccacatc 180 gtgtacgcct tcagccaaaa tcgttaattc atcaatcggt tgcatattct ctccgtctgc 240 tcatttcagc gataaaggca gggtaaggaa tcgcccggtt ggcgagcgcg gctgttcagc 300 gtggaaatac ggcgaaatgc gggagagagg gagctgacgt cggcaacgag gtcagttagc 360 gggtcatccg gcgtgcaagt gaccggtttc acagttcatt ccaaaccaaa accatgaaga 420 gtgactaaac agtcactcct gcttccgtta tgggaacacg ttaccgtgag cctgctcaaa 480 actattaaaa aatctcttcg atccagataa tgaaatggca tttcaattat tgaattgttc 540 gatttttaca ctaagactga gtttggctac cgacatactt tgatattcct taccaatgca 600 tgccgttttc agcctcaata cgggcgcagg gaataacaca tgcccacaac atatttatgg 660 tttagagaaa aggaacacac actatgaaat cactgattac cccgattacc gctggactgc 720 tactggcgct cagccaaccg ttgctggccg ccaccgacac cggtggctac gccgttacgg 780 cagggggcaa cgttaccggt gccgtcagca aaacggcgac gtcgatgcag gatatcgtcg 840 atatcatcgc cgcggcccgt ctggatgcta acggtaaaaa ggtgaaaggc ggcgcgtacc 900 cgctggtcat cacctatacc ggtaacgaag attcgctgat caacgccgcg gcggccaata 960 tctgcggcca gtggagcaaa gacgcccgcg gcgtggaaat caaggaattc accaaaggca 1020 tcaccatcat cggcgccaac ggttcttccg ccaacttcgg tatctggatt aagaaatcct 1080 ccgacgtggt ggtgcaaaac atgcgcatcg gttacctgcc gggcggcgct aaagatggcg 1140 atatggtccg cgttgacgat tcgccgaacg tctgggttga ccacaacgaa ctgttcgccg 1200 ccaaccatga atgcgacggc acgccggacg gcgacaccac ctttgaggcc gcggtggata 1260 tcaagggggc ttcggattac gtcaccgtat cctacaacta catccacggc gtgaagaaag 1320 tcggtctgga cggttccagc aacagcgaca ccggtgccaa catcacctat caccataacc 1380 gctacaacga cgtcaacgcc cgcctgccgt tgcagcgcgg cggcctggtg cacgcttaca 1440 ataacctgta cagcaacgtg accagctccg gcctgaacgt gcgccagaac ggtcaggcgt 1500 taatcgaaag caactggttc gaaaacgcgg tgaacccggt gacgtcccgt tatgacggca 1560 agaacttcgg cacctgggtg ctgaaaaaca acaacatcac caaaccggcc gacttctcta 1620 cctacagcat cacctggacg gcggacacca aagcttacgt caacgcggac agctggacct 1680 ccaccggcac tttcccgacg gtggcctaca gctacagccc ggtgagcgca caatgcgtga 1740 aggacaatct ggctaactac gccggcgtgg gcaagaacct ggcaacgctg accagcgcac 1800 gctgtaaata atccggcagc gaaggccggg catgaaaagc agcccggctg acgccctatc 1860 accgagcggg ctacacgccc gtctttttct tttcggtacg ttccacgcct tgtcaccatc 1920 agtccgatac ggaacgcgac ggacaaggct gagtgcctta taccgatttc agccaatttg 1980 ataattaatc atcttttaat tatcaagcgt tatgactaag tggtcagaac tccggccact 2040 aaaagtgacg cctgtcaaaa tttgtaaaaa cataatcacc actaataatg aaattacgtt 2100 tcaactattg aaacgtctcc tttttgagct aaaactgagc gcgggttgat tcgtgcgatt 2160 cggttttact tatctatccc ccaacgcatt cgagtggcag gaaagcggtt aacgcacctg 2220 cgacgtggag cgatgggatc ccctgccgca ccaacccaca accaagggca tgtggaacga 2280 taaatgccca tatcacattt ttcaaaaaca ggaatattac tcatgaaatc attcattgca 2340 ccgattgccg ccggtctgct gctggctttt agtcaatcca gtctggctgc gactggcggt 2400 tacgccacca cttccggtgg taacgtgaca ggggctgtca gcaaaaccgc agcatccatg 2460 caggacatta tcgatatcat cgacg 2485 // |
|