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EBI DbfetchID X66781; SV 1; linear; genomic DNA; STD; PRO; 4065 BP. XX AC X66781; XX DT 10-JUL-1992 (Rel. 32, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 14) XX DE Y.intermedia hemC cya and cyaY genes for uroporphyrinogen I synthase, DE adenylate cyclase, and an unknown protein XX KW adenylate cyclase; cya gene; cyaY gene; hemC gene; KW uroporphyrinogen I synthase. XX OS Yersinia intermedia OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. XX RN [1] RP 1-4065 RX DOI; 10.1016/0300-9084(96)82192-4 RX PUBMED; 8874804. RA Glaser P., Sismeiro O., Danchin A., Trotot P., Vivares C., Bresson-Roy A.; RT "Compartative analysis of the cya locus in enterobacteria and related RT Gram-negative facultative anaerobes"; RL Biochimie 78:277-287(1996). XX RN [2] RP 1-4065 RA Danchin A.; RT ; RL Submitted (07-JUN-1992) to the EMBL/GenBank/DDBJ databases. RL A. Danchin, Institut Pasteur, Unite de Regulation de l'Expression RL Genetique, 28 rue du Docteur Roux, 75724 Paris Cedex, FRANCE XX FH Key Location/Qualifiers FH FT source 1..4065 FT /organism="Yersinia intermedia" FT /mol_type="genomic DNA" FT /db_xref="taxon:631" FT -35_signal 540..545 FT /note="cya promoter P1" FT CDS complement(<1..550) FT /transl_table=11 FT /gene="hemC" FT /product="hydroxymethylbilane synthase" FT /EC_number="4.3.1.8" FT /db_xref="GOA:P30527" FT /db_xref="InterPro:IPR000860" FT /db_xref="UniProtKB/Swiss-Prot:P30527" FT /protein_id="CAA47276.1" FT /translation="MLDKIIRIATRQSPLALWQAHYVQHLLQANHPGLQVELVPMVTRG FT DIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDP FT RDAFVSPHFAHIDDLPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGD FT YHAIILAVAGLNRLGLASRI" FT -10_signal 563..568 FT /note="cya promoter P1" FT -10_signal complement(582..587) FT /gene="hemC" FT -35_signal complement(606..611) FT /gene="hemC" FT -35_signal 793..798 FT /note="cya promoter P2" FT -10_signal 816..821 FT /note="cya promoter P2" FT mRNA 828..>3563 FT /gene="cya" FT misc_feature 1000..1026 FT /note="cya consensus enterobacteria" FT RBS 1005..1008 FT /gene="cya" FT CDS <1016..3562 FT /transl_table=11 FT /gene="cya" FT /product="adenylate cyclase" FT /EC_number="4.6.1.1" FT /note="ttg start" FT /db_xref="GOA:P30528" FT /db_xref="InterPro:IPR000274" FT /db_xref="UniProtKB/Swiss-Prot:P30528" FT /protein_id="CAA47277.1" FT /translation="LYLYIETLKQRLDAINQLRVDRALAAMGPTFQKVYSLLPTLLHCH FT HPLMPGYLDGNVPHGVCLFTPNETQQDYLSEVEAKWGEPLQQSVGGELPITGVYSMGST FT SSIGQCHTSDLDVWVCHQAWLDSEERNRLQEKCSLLEKWAASMGVEVSFFLIDENRFRH FT NASGSLGGEDCGSTQHILLLDEFYRSAVRLAGKRILWNMVPVEEENNYDDYVLSLYAQG FT VLTPNEWLDLGGLSTLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNSQLL FT AMEIKQRLHAGEIVAFGLDAYCMMLDRVTRYLTQINDTTRLNLVRRCFYLKVCEKLSRS FT PASVGWRREILSQLVSEWGWSDESLAVLDNRANWKIERVREAHNELLDAMMQSYRNLIR FT FARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEEHLTFIHVPAGR FT ANRAGWYLYNQAPSMDAIVSHQPLEYNRYLNKLVSWAYFNGLLTSKTRLHIKSANLCDT FT VKLQELVTDISHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEHDPTAAFRNQVVHFDFR FT KLDVFSFGEQQQCLVGSIDLLYRNSWNEVRTLHFSGEQAVLEALKTILGKMHQDAAPPE FT SVDVFCYSQHLRGLIRTRIQQLVSECIELRLSSTRQEPGRFKAVRVSGHTWGLFFERLS FT VSVQKLENAVEFYGAISNNKLHGLSIQVETDQIHLPPVVDGFASEGIIQFFFEGTADEK FT GFNIYILDESNRVEVYHHCEGSKEALVRDVSRFYSSSHDRFTYGSSFINFNLPQFYQIV FT QLDGRTQVIPFRSNTLSHLYIVDREPSQPAQQFQLH" FT misc_feature 3622..3701 FT /note="cya palindromic units" FT CDS complement(3725..4048) FT /transl_table=11 FT /gene="cyaY" FT /db_xref="InterPro:IPR002908" FT /db_xref="UniProtKB/Swiss-Prot:P30534" FT /protein_id="CAA47278.1" FT /translation="MNQYSEFHQLADQLMLYIEETLDGFSGDSDIDYETNGGVMTLTFE FT NGSKIVINRQEPLHQVWPATKAGGYHFNYREGKWFCSRSGEEFFAKLSQAATTQAGEEV FT SFG" XX SQ Sequence 4065 BP; 1027 A; 971 C; 1020 G; 1047 T; 0 other; ggatccgcga tgccaaccca aggcgattaa ggcccgcaac cgccagtatg atcgcgtggt 60 agtcaccgtt atcaagcttg gcaaggcgag tacccacatt accccgcagg tcgcggataa 120 tcaggtccgg gcgacgctcg cgtaattggc actggcggcg caggctggag ttgccgacaa 180 tgctgcccgc aggcaaatca tcaatatgag caaaatgtgg ggatacaaag gcatcacgcg 240 gatcatccgg ttcgcaaata gtcaccaggc ccaagccctc agggaaggcg actggcacat 300 ctttcatgga gtgtacggcg atatccgccc gtccgtccag cagtgctagc tctaactctt 360 tgacgaacaa gcctttacca ccgacttttg ccagtggggt atccagaata atgtccccac 420 gggtaaccat cgggaccaat tcgacctgta agccggggtg attggcttgc agtaaatgtt 480 gaacataatg tgcttgccat aaggcgagcg ggctttgtcg cgtggcaatt cgaataattt 540 tgtctaacat tgcttgttac cgttttatat ttttgcggcc catcctatct tgaccagtgg 600 aatgctgtca gtgcggtagc cacatgaaaa cgacggataa gagcacaata aagcagctat 660 tgtaacaaat cacatggcgg gataacttct cccttagcgc ctactttgat gtcatggtgt 720 cgctacccgt caacctaact gtaaatgtcg cctaagaaag ggatgtatag acattacaat 780 tgtagggata gctttacggt caatcggcaa ggtgttagat tgatcacgtt tccagcaata 840 attcgtcaac tgttattcaa acaaaatgtc ttcaaacaaa atgttttttg gtcagttcaa 900 caaaaagtac atttttcgct gaaagtcaaa aaaagcaata aacgaatctg ggacgcgggt 960 tttttttcta agcaccggaa caattctaag caccggaaca atcaggcgag acgtcttgta 1020 cctctacatc gagacactga aacagcgact ggatgcgatc aaccaattac gagtcgatcg 1080 cgccttggcg gcaatggggc caaccttcca aaaggtctac agtctgctac cgaccctact 1140 acattgtcat cacccactga tgccggggta ccttgatggt aacgttcccc atggcgtctg 1200 cctttttacg cccaatgaaa cgcaacagga ttacctgtct gaggttgaag ccaagtgggg 1260 cgaacctttg caacagagtg tcggcggcga actgccgatt accggcgtct attctatggg 1320 tagcacttcc tctattgggc aatgccatac ttcagatctt gatgtttggg tatgtcatca 1380 ggcctggctt gattctgaag agcgtaaccg cttgcaagaa aaatgcagtc tgctggaaaa 1440 atgggctgca tcaatgggtg ttgaagtcag cttcttcctg atagatgaaa accgtttccg 1500 ccataatgcc agtggcagct tggggggcga agattgcggt tccacccaac acatattatt 1560 gctggatgag ttttaccgca gcgcggttcg tctggcaggg aaacgtattc tgtggaatat 1620 ggttccggtg gaagaagaaa ataattatga cgattacgta ctgtcgctct atgcacaggg 1680 cgtattaaca ccgaatgagt ggctggattt gggcggtttg agcaccctgt cagccgaaga 1740 gtatttcggt gccagtttgt ggcaactgta taaaagtatc gattcaccct ataaggccgt 1800 gctgaaaacc ttattgctgg aagcgtattc gtgggaatac cccaattctc aattgctggc 1860 aatggagatc aaacagcgcc tgcatgccgg tgagattgtg gccttcggtc ttgatgctta 1920 ttgcatgatg cttgatcgcg tcactcgcta tctaacccaa ataaatgaca ctacccgcct 1980 gaatttggtg cggcgttgtt tctatctgaa agtgtgtgaa aaactgtccc gtagcccggc 2040 aagtgtcggc tggcggcgtg agatcctcag ccaactggtc agtgaatggg gctggagcga 2100 cgagagtctg gcggtgctgg ataaccgtgc taactggaag attgagcggg tacgtgaagc 2160 gcataacgag ctgttggatg cgatgatgca gagttatcgc aatttgatcc gctttgcacg 2220 gcgcaacaac ctgagtgtca gtgccagccc gcaggatatc ggggttctga cccgtaaact 2280 gtacgcggca tttgaagctt tacccggcaa agtaacactg gtaaacccac aaatttcacc 2340 ggatttatcg gaagaacatc tgactttcat tcatgttccg gcaggccgtg ctaaccgcgc 2400 gggttggtac ttatataatc aagcgccctc tatggacgcg attgtaagtc accaaccgct 2460 ggaatataac cgttacctga acaaactggt gtcctgggcc tatttcaacg ggctattgac 2520 cagcaaaacc cggctacata ttaaaagcgc caatctgtgc gatacggtga aattgcaaga 2580 attggtgacg gatatctctc accacttccc gttacgcctg cctgcgccca cacctaaggc 2640 actgtatagc ccgtgtgaga ttcgccattt ggcgattatt gtcaatttag agcatgaccc 2700 gaccgcggct ttccgcaatc aggtggtgca ttttgatttc cgtaaactgg atgtattcag 2760 ttttggcgag cagcaacagt gcctggtggg cagtatcgat ttgctgtacc gcaactcctg 2820 gaatgaagtg cgaaccttgc atttcagcgg tgagcaagcg gtgttggaag cattgaaaac 2880 catcttaggc aaaatgcatc aggatgcggc gccaccggag tcagtggatg tcttctgtta 2940 cagccaacat ttacgtggtt tgattcgtac ccgcattcag cagttggttt ccgagtgtat 3000 tgagttgcgt ttatccagta cccgccagga accgggccgt tttaaagcgg tacgggtttc 3060 cggtcatacc tggggtttgt tctttgaacg cctgagtgtt tcagtacaaa agttggaaaa 3120 tgctgtcgaa ttttacggtg cgatttctaa taacaaactg catgggttat cgattcaggt 3180 ggaaactgat caaattcatc tgccgccagt ggtagacggt tttgccagcg aggggatcat 3240 tcagttcttc ttcgaaggca ccgcagatga aaaaggcttt aacatttata ttttggatga 3300 gtcaaatcgc gttgaggttt atcaccactg cgagggcagt aaagaggcgt tggtgcgaga 3360 tgtcagccgt ttctattcat cgtctcatga ccgttttacc tacggctcca gctttattaa 3420 cttcaacctg ccgcagttct accaaattgt gcaattagat ggccgcactc aagtgattcc 3480 ttttcgcagc aacaccttat ctcatctgta tatcgtcgat agagagccga gccagcctgc 3540 gcagcagttc cagttacatt aatttcccaa gctgataagt aaaaaagaca cgctaaaatg 3600 tatcaggctg ctgacaaagt cgattgaagg ggaaatgttc cgttgggggt gtagtcgcgt 3660 aagcgaccga acggccccta gggaccgttg ccccttcaat cactgaacgc tcaaataagg 3720 tcggttaacc gaagctcacc tcttcacctg cctgcgtggt ggccgcttgt gataatttgg 3780 cgaaaaattc ctctccgcta cgtgagcaaa accacttgcc ttcacgataa ttgaaatggt 3840 aaccaccggc tttggttgcc ggccatacct gatgcagtgg ttcttggcgg ttgataacaa 3900 tcttactgcc attttcgaac gtcagggtca tcaccccgcc attggtttca taatcgatat 3960 cactatcgcc gctaaaacca tccagtgtct cttcaatgta aagcatcaat tgatcggcta 4020 actggtgaaa ctcgctgtat tgattcactt gaagtacgaa aaaaa 4065 // |
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