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EBI DbfetchID X66451; SV 1; linear; genomic DNA; STD; INV; 3903 BP. XX AC X66451; S50742; XX DT 23-JUN-1992 (Rel. 32, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 19) XX DE E.octocarinatus RPA2 gene for RNA polymerase I second largest subunit XX KW RNA polymerase I; RNA polymerase subunit. XX OS Euplotes octocarinatus OC Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; OC Hypotrichia; Euplotida; Euplotidae; Euplotes. XX RN [1] RC revised by [3] RA Klein A.; RT ; RL Submitted (01-JUN-1992) to the EMBL/GenBank/DDBJ databases. RL A. Klein, University of Marburg, Molekulargenetik, Fachbereich Biologie, RL Philipps-Universitaet, Karl-von-Frisch Str., 3550 Marburg (Lahn), FRG XX RN [2] RP 1-2002 RX DOI; 10.1093/nar/20.17.4445 RX PUBMED; 1408746. RA Kaufmann J., Klein A.; RT "Gene dosage as a possible major determinant for equal expression levels of RT genes encoding RNA polymerase subunits in the hypotrichous ciliate Euplotes RT octocarinatus"; RL Nucleic Acids Res. 20(17):4445-4450(1992). XX RN [3] RP 1-3903 RA Klein A.; RT ; RL Submitted (07-AUG-1992) to the EMBL/GenBank/DDBJ databases. RL A. Klein, University of Marburg, Molekulargenetik, Fachbereich Biologie, RL Philipps-Universitaet, Karl-von-Frisch Str., 3550 Marburg (Lahn), FRG XX RN [4] RP 1-3903 RX DOI; 10.1093/nar/20.22.5985 RX PUBMED; 1461731. RA Kaufmann J., Florian V., Klein A.; RT "TGA cysteine codons and intron sequences in conserved and nonconserved RT positions are found in macronuclear RNA polymerase genes of Euplotes RT octocarinatus"; RL Nucleic Acids Res. 20(22):5985-5989(1992). XX CC See also X66450-3 XX FH Key Location/Qualifiers FH FT source 1..3903 FT /organism="Euplotes octocarinatus" FT /strain="(68)-VIII" FT /mol_type="genomic DNA" FT /dev_stage="vegetative" FT /db_xref="taxon:5937" FT CDS 365..3865 FT /transl_table=10 FT /transl_except=(pos:464..466,aa:Cys) FT /transl_except=(pos:479..481,aa:Cys) FT /transl_except=(pos:965..967,aa:Cys) FT /transl_except=(pos:1100..1102,aa:Cys) FT /transl_except=(pos:1502..1504,aa:Cys) FT /transl_except=(pos:1604..1606,aa:Cys) FT /transl_except=(pos:1703..1705,aa:Cys) FT /transl_except=(pos:1895..1897,aa:Cys) FT /transl_except=(pos:2102..2104,aa:Cys) FT /transl_except=(pos:2258..2260,aa:Cys) FT /transl_except=(pos:2960..2962,aa:Cys) FT /transl_except=(pos:3614..3616,aa:Cys) FT /transl_except=(pos:3743..3745,aa:Cys) FT /gene="rpa2" FT /product="DNA-directed RNA polymerase" FT /EC_number="2.7.7.6" FT /db_xref="GOA:P28365" FT /db_xref="InterPro:IPR007120" FT /db_xref="InterPro:IPR007121" FT /db_xref="InterPro:IPR007641" FT /db_xref="InterPro:IPR007642" FT /db_xref="InterPro:IPR007644" FT /db_xref="InterPro:IPR007645" FT /db_xref="InterPro:IPR007647" FT /db_xref="InterPro:IPR009674" FT /db_xref="InterPro:IPR015712" FT /db_xref="UniProtKB/Swiss-Prot:P28365" FT /protein_id="CAA47067.1" FT /translation="MKTNAKFDRKEISKIYKNIARHHIDSFDFAMSTCLNRACEHMLPF FT DYIVPEESASCGFKKLTLWYDSFELGQPSLGEIDYDSHILYPSECRQRKMTYTIPLFAT FT IFKKFDDEMVDNFKVKLGDIPTMGRKKFCNLKGLTKKELAKRGEDMLEFGGYFIVNGNE FT KVIRMLIVPKRNFPIAFKRSKFLERGKDFTDYGVQMRCVRDDFTAQTITLTYLSDGSVS FT LRLIYQKQEFLIPIILILKALKNCTDRQIYERIVKGNFNQRQISDRVEAILAVGKDLNI FT YDSDQSKALIGSRFRIVLAGITSETSDIDAGDLFLSKHICIHTDSYEAKFDTLILMIDK FT LYASVANEVELDNLDSVAMQDVLLGGHLYLQILSEKLFDCLHINLRARLNKELKRHNFD FT PMKFRDVLTNQKINCGIGLIGKRMENFLATGNLISRTNLDLMQTSGFCIIGDKLNNIRF FT LSHFRSIHRGQYFAEQKTTSVRKLLPESWGFICPVHTPDGAPCGLLNHISMSCVPIGSE FT EKQIDIDKFRNILGELGMNSISSDLCLNYHTGYYPVIFDGIHLGYVEKDIGESFVEGLR FT YLKCTQSQPDYAIPRTLEIAFIPFSGYSRNLQWPGIFLASTPARFTRPVKNLHYNCIEW FT ISPLEQMNLSIACTDEDITPETTHQELDPINILSIVASVGVFAEYNQSPRNMYQCQMAK FT QTMGTPYHNHQFRTDNKIYRLLFPHRPIVKTRTQVDFDIEEYPSGTNAVVAVISYTGYD FT LEDAMIINKSSYERGFGHGVVYKSYTHDLNESNSQSTRGIKSSVRYKFLNNVSQKDKSK FT IKLENIDPDGLPKIGSQLTKGKPELCIFDTLKRGAKLSKFKDSEKARIETVRVCGNDDK FT NPDNLSIGYTIRYSRIPVIGDKFSSRHGQKGVLSVLWPQVDMPFTENGITPDLIINPHA FT FPSRMTMGMLIQSMAAKSGSLRGEFKTVETFQRYDDNDIVGHFGKELLDKGFNYHGNEL FT MYSGIFGTPLKADIFIGVVYYQRLRHMVSDKSQARGTGPIDILTHQPVKGRKKGGGIRF FT GEMERDSLLAHGAAYCLNDRLFRSSDYSEGFVCQNCGSILSCYVNRAIMKTQTFIPPSL FT DESNKDTEDKEIHMNEKVICKVCKKNSNCKKVALPFVLRFLANELASMGIKLKFTVNDF FT " XX SQ Sequence 3903 BP; 1470 A; 508 C; 699 G; 1226 T; 0 other; ccccaaaacc ccattcctat ttagggaaat tgatagagaa aaattgtagt gttttaataa 60 ttttatttgg taagtatgga agtgagatca agaaaagcgt atattctatt taaagctctt 120 tgataaatac taagaacgaa tccttattgt tatgaatgca tataagattg caaaaacgtc 180 taataatttt gttaatatag atagtgattc ttaatggagt acgactctat tgatgatctt 240 actgagtatt ggaaccaaaa ggtaagtgct actagtctta atcgattttt aacatatttg 300 attattatag gtaaactcta aattagaaaa actaagaaat caacatgtta atataacaga 360 agacatgaaa acaaatgcta aatttgatag aaaggaaatt tcaaaaattt acaaaaatat 420 tgcaagacat catattgact cttttgattt tgcaatgtcg acatgactga atagagcatg 480 agaacatatg cttccatttg attatattgt tcctgaggaa tcagcaagtt gtggattcaa 540 aaagttgact ctctggtatg attcatttga gctcggacaa ccttcattag gagaaattga 600 ctacgattct catattttat atccttccga atgtagacaa agaaaaatga cttatactat 660 accattattt gctactattt tcaagaaatt cgatgatgaa atggtagata attttaaagt 720 taaactagga gacataccta caatgggtag gaagaaattt tgtaatttaa aaggactaac 780 gaaaaaagaa ttagctaaaa gaggagaaga tatgttagag tttggaggat attttatagt 840 taatggaaac gagaaagtaa ttagaatgct tatagtgcct aaaagaaact ttccaatcgc 900 ttttaaaaga tcaaaattct tagaaagagg aaaggacttt actgactatg gtgtacaaat 960 gagatgagta agagatgatt ttacagctca aacaattaca cttacttatt tatctgatgg 1020 atcagtttca ttaagattaa tctatcaaaa gcaagaattt ctaattccaa ttatcttaat 1080 tttaaaagca ttgaaaaatt gaactgatag acaaatatat gaaagaatag taaaaggaaa 1140 ttttaaccaa aggcaaataa gcgatagagt agaagcaatt ttagcagttg gaaaggattt 1200 aaatatttat gattctgatc aaagcaaagc attaattgga tctagattta gaattgtatt 1260 agcgggaatt acaagtgaaa cgtcagatat tgatgctggc gatttatttc tatcaaaaca 1320 tatttgcata catacagata gttatgaagc aaaatttgat acattaatat taatgattga 1380 taaactttat gcatctgttg caaatgaagt agagcttgat aatttggatt cagttgcaat 1440 gcaagatgta ctcttgggag gacacttata tcttcaaatt ttatcagaaa aactttttga 1500 ttgacttcat attaatctca gagcaagatt aaacaaagaa ttaaaaagac ataattttga 1560 tccaatgaaa tttagagatg tattaacaaa ccaaaagatt aattgaggca tcggattaat 1620 aggaaaaaga atggagaact ttttagcaac aggaaatttg atatcgagaa ctaatttaga 1680 cttaatgcaa acatctggat tttgaataat cggagataaa ttaaataata ttcgattttt 1740 gtcgcacttt agatcaattc atagaggaca gtactttgct gaacagaaaa caacaagtgt 1800 aagaaaatta ttaccagaat catggggatt tatttgtcct gttcatactc cagatggtgc 1860 tccatgtgga ctccttaacc atatttcaat gtcatgagtt ccaattggat cagaagaaaa 1920 gcaaattgat attgataaat ttagaaatat attgggagaa ttaggaatga actcaatatc 1980 tagtgatttg tgtttaaatt atcatactgg atattatcct gtaatttttg atggaataca 2040 cttaggatat gttgaaaagg atataggaga gtcatttgtc gaaggattac gatatttgaa 2100 gtgaactcaa tctcaacctg attatgcaat tccaagaact cttgaaattg cttttattcc 2160 attttcagga tatagtagaa atcttcaatg gccaggaata tttttggctt ctacacctgc 2220 tcgtttcacg agaccagtta aaaatcttca ttataattga attgaatgga ttagtcctct 2280 tgagcaaatg aatttatcta ttgcttgtac tgatgaggat ataacaccag aaacaactca 2340 ccaagagttg gatccaatta atattctatc tattgtagca tctgtaggag tatttgcaga 2400 atataatcaa tctccaagaa acatgtatca atgtcaaatg gctaaacaaa caatgggaac 2460 tccatatcac aatcatcagt ttagaacaga taacaaaata taccgtttac ttttccctca 2520 tagacctata gtaaagacaa gaacacaagt tgattttgat attgaagaat atcctagtgg 2580 aacaaatgca gttgttgctg ttatttctta tactggatat gatttagaag atgcaatgat 2640 tattaacaag tcttcatacg aaagaggatt tggtcatgga gtcgtctata aaagttatac 2700 tcatgattta aatgaatcta attctcaaag cactcgtgga ataaaatcat ctgtaaggta 2760 taagttccta aataacgtta gtcaaaaaga taaatcaaaa attaagcttg aaaatattga 2820 tcctgacggt ttaccgaaaa taggatctca attgacaaaa ggaaaacctg aattatgaat 2880 ttttgacacg cttaaaagag gagctaaatt atctaaattc aaagactctg aaaaggcaag 2940 aatagaaact gtaagagttt gaggaaatga tgataagaat ccagataatc ttagtattgg 3000 ctatacaata agatattcaa gaatccctgt aattggtgat aaattctcat caagacatgg 3060 gcagaaagga gttttatcag ttctatggcc tcaagtagat atgccattta ctgagaatgg 3120 catcacacct gatttaatta ttaatcctca tgcctttcca tcaagaatga caatgggaat 3180 gctcattcaa agcatggcag caaagagtgg atcattgaga ggagaattta aaacagttga 3240 aacatttcaa agatatgatg ataacgatat tgttggtcat tttggcaaag aattactaga 3300 taagggtttt aattaccatg gaaatgaact aatgtacagc ggaatatttg gaactccatt 3360 aaaagcagat atctttattg gtgtcgttta ttatcaacga ctcagacaca tggttagtga 3420 taaaagccaa gcaagaggaa caggaccaat tgatatttta actcatcagc ctgttaaagg 3480 aagaaagaag ggaggaggta taagattcgg agaaatggaa agagattcat tgcttgctca 3540 tggagctgca tactgtctta atgatagact tttcagaagt tctgattata gtgaaggatt 3600 cgtttgtcaa aactgaggaa gtatactttc ttgatatgta aatagagcaa taatgaagac 3660 tcaaactttt attcctccta gcttagatga gtctaataaa gacacagaag ataaagaaat 3720 tcatatgaac gaaaaggtaa tttgaaaggt ttgcaagaag aatagtaatt gtaaaaaggt 3780 ggctctacca tttgtactca gattcttggc aaatgagctt gcatcaatgg gaataaagct 3840 taaatttact gtaaatgatt tttaaattat tcaatatttt attaaattat tggggttttg 3900 ggg 3903 // |
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