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EBI DbfetchID X64395; SV 1; linear; genomic DNA; STD; PRO; 2949 BP. XX AC X64395; S47077; XX DT 14-FEB-1992 (Rel. 30, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 8) XX DE E.coli genes nusB (ssyB) and 3 orfs XX KW nusB (ssyB) gene. XX OS Escherichia coli OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. XX RN [1] RP 1-2949 RA Ito K.; RT ; RL Submitted (06-FEB-1992) to the EMBL/GenBank/DDBJ databases. RL K. Ito, Inst for Virus Research, Kyoto University, Sakyo-ku, Kyoto 606-01, RL JAPAN XX RN [2] RP 1-2949 RX DOI; 10.1007/BF00538702 RX PUBMED; 1406588. RA Taura T., Ueguchi C., Shiba K., Ito K.; RT "Insertional disruption of the nusB (ssyB) gene leads to cold-sensitive RT growth of Escherichia coli and suppression of the secY24 mutation"; RL Mol. Gen. Genet. 234(3):429-432(1992). XX DR GOA; P46122. DR PDB; 2JWY; NMR. DR UniProtKB/Swiss-Prot; P46122; YAJI_ECOLI. XX FH Key Location/Qualifiers FH FT source 1..2949 FT /organism="Escherichia coli" FT /map="9.5 min" FT /strain="K12" FT /mol_type="genomic DNA" FT /db_xref="taxon:562" FT misc_feature 330..357 FT /note="promoter-like sequence P1" FT misc_feature 333..362 FT /note="promoter-like sequence P1'" FT CDS 391..840 FT /transl_table=11 FT /note="orf1" FT /db_xref="GOA:P0A8D0" FT /db_xref="InterPro:IPR003796" FT /db_xref="UniProtKB/Swiss-Prot:P0A8D0" FT /protein_id="CAA45734.1" FT /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAE FT LVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVP FT SKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED" FT CDS 844..1947 FT /transl_table=11 FT /note="orf2, homologue to B.subtilis ribG" FT /db_xref="GOA:P25539" FT /db_xref="InterPro:IPR002734" FT /db_xref="PDB:2G6V" FT /db_xref="UniProtKB/Swiss-Prot:P25539" FT /protein_id="CAA45735.1" FT /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQR FT AGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPN FT PQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAM FT ASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQ FT NLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDL FT VVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLE FT KLADAPQFKFKEIRHVGPDVCLHLVGA" FT misc_feature 1957..1986 FT /note="promoter-like sequence P2" FT CDS 2036..2506 FT /transl_table=11 FT /note="orf3, homologue to B.subtilis ribH" FT /db_xref="GOA:P61714" FT /db_xref="HSSP:1RVV" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:P61714" FT /protein_id="CAA45736.1" FT /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVK FT DENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHV FT AQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA" FT CDS 2526..2945 FT /transl_table=11 FT /gene="nusB (ssyB)" FT /db_xref="GOA:P0A780" FT /db_xref="InterPro:IPR006027" FT /db_xref="PDB:1EY1" FT /db_xref="UniProtKB/Swiss-Prot:P0A780" FT /protein_id="CAA45737.1" FT /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDV FT LYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAI FT NEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK" XX SQ Sequence 2949 BP; 708 A; 739 C; 825 G; 677 T; 0 other; gatctggctt tccagtcttg ccggtgtttt cgctccaggc agaaggtaaa ccccactgct 60 ggattttgca ttcagcctgt tttgctgagt gattttgact gtttcttgat tgagttgcgt 120 catctcctgg ttcagcgtgc tgacgctgtg tttcatctgt cgcacttcac tttgctgcac 180 acaggcgcta aggctgaaca ggcttcccag caggagcagt cgaaaaacgt tagtattcat 240 aggtcgtccc tttctcgtcg caattagcct aatggtagag ggtaaaagca gcgaaagcat 300 cgatccttta tctcaaaagc gttgcgcctt tgttgtatcg tcagttcagg gtaaaataga 360 tttccgttaa ccacctggtc aggacgccgt atgcattgcc cattctgttt cgccgtggac 420 actaaggtaa ttgactctcg tctcgtgggc gagggttcat ccgtacgccg ccgtcggcag 480 tgtctggtgt gtaatgaacg tttcaccacc tttgaagtgg cggagctggt tatgccgcgt 540 gttgtaaaaa gcaacgacgt gcgtgaaccg tttaatgaag agaaattgcg tagcggaatg 600 ctgcgggcgc tggaaaaacg tccggtgagt tccgatgacg tcgaaatggc aatcaatcat 660 attaaatcgc agctgcgcgc caccggtgag cgcgaagtgc cgagcaagat gattggcaat 720 ctggtgatgg agcaattgaa aaagctcgat aaagtcgcct atatccgttt tgcctctgtc 780 taccgcagtt tcgaagatat caaagaattt ggcgaagaga tcgcgcgcct ggaggactaa 840 gccgtgcagg acgagtatta catggcgcgg gcgctaaagc tggcgcaacg aggacgtttt 900 accacgcatc ccaacccgaa tgtcgggtgc gtcattgtca aagatggcga aattgtcggt 960 gaaggttacc accaacgtgc gggtgaacca catgccgaag tacacgcgtt gcgtatggcg 1020 ggtgaaaaag ccaaaggtgc gaccgcctat gtcacactcg aaccctgtag ccatcatggt 1080 cgtacgccac cgtgctgtga cgcactcatc gccgctggcg tagcgcgcgt ggttgcctcg 1140 atgcaagatc ctaacccgca ggtcgctggg cgtggacttt accgtctgca acaggctggc 1200 attgacgtca gccacggcct gatgatgagt gaagccgagc aattgaataa aggctttctc 1260 aagcggatgc gcaccggctt tccttatatt cagttaaaac ttggcgcatc gcttgatggt 1320 cgcacggcga tggcgagcgg cgaaagccag tggatcactt cgccccaggc gcggcgtgat 1380 gtacaactac tgcgcgcgca aagtcatgcc attttaacca gcagcgccac ggtgctggcg 1440 gatgatcctg ccttaacggt gcgttggtct gaactggatg aacaaactca ggcgctctat 1500 ccgcaacaaa atctccgtca gccgatacgt attgtgattg atagccaaaa tcgcgtgacg 1560 ccggtacatc gcattgtgca gcagcccggc gaaacctggt tcgcgcgtac gcaggaagat 1620 tctcgtgagt ggccggaaac ggtgcgtacc ttgctgattc cagagcataa aggtcatctg 1680 gatctggttg tactgatgat gcaactgggt aaacagcaaa ttaacagcat ctgggtggaa 1740 gcggggccaa cgctcgctgg cgcattgctg caggcgggtt tagtcgatga gctgattgtc 1800 tatatcgcac ctaaactatt aggcagcgac gcccgcggat tatgcacgct gccagggctt 1860 gagaaattag ccgacgcccc ccaatttaaa ttcaaagaga tacgtcatgt aggcccggat 1920 gtttgcctgc atttagtggg tgcatgatct cccggctcga aagggaagca gcgcacgaaa 1980 tattatgcta aaatccgccc ccctgcgggg ccatactcga acccgaagga agaaaatgaa 2040 cattattgaa gctaacgttg ctaccccgga cgctcgcgtc gccatcacca tcgcgcgttt 2100 caacaacttt atcaatgaca gcctgctgga aggtgcaatt gacgcactga aacgtatcgg 2160 tcaggtaaaa gatgaaaaca ttaccgttgt ttgggtgcct ggtgcctatg agctgccgct 2220 ggcggcgggt gcactggcta aaaccggtaa atacgacgcg gtgattgcgc tgggtacggt 2280 tattcgtggt ggcactgccc actttgaata tgtcgctggt ggtgcaagca acggcctggc 2340 gcatgttgcc caggacagcg aaattccggt tgcttttggg gttctgacca ctgaaagcat 2400 tgaacaagcg atcgaacgtg ctggcaccaa agctggcaac aaaggtgcag aagctgcact 2460 gaccgcgctt gaaatgatta atgtattgaa agccatcaag gcctgaaatt agtaagggga 2520 aatccgtgaa acctgctgct cgtcgccgcg ctcgtgagtg tgccgtccag gcgctctact 2580 cctggcagtt gtcccagaac gacatcgctg atgttgaata ccagttcctg gctgaacagg 2640 atgtaaaaga cgttgacgtc ctgtacttcc gtgagctgct ggccggggtg gcgactaata 2700 ccgcatacct cgacggactg atgaagccat acctgtcccg cctgctggaa gaactgggac 2760 aggtagaaaa agcagtactg cgcattgcgc tgtacgaact gtctaaacgt agcgatgtgc 2820 catacaaagt ggccattaac gaagcgatcg aactggcgaa atcgttcggc gcagaagaca 2880 gccataagtt cgtcaacggc gtactcgata aagcagcacc tgtgattcgc cctaacaaaa 2940 agtgatatc 2949 // |
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