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EBI DbfetchID X64356; SV 1; linear; genomic DNA; STD; FUN; 2304 BP. XX AC X64356; S43467; XX DT 14-SEP-1992 (Rel. 33, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 10) XX DE A.niger pgaC gene for polygalacturonase XX KW pgaC gene; polygalacturonase. XX OS Aspergillus niger OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; OC Aspergillus. XX RN [1] RP 1-2304 RA Visser J.; RT ; RL Submitted (04-FEB-1992) to the EMBL/GenBank/DDBJ databases. RL J. Visser, Dept of Genetics, Section Mol Genetics, Agricultural University, RL Dreyenlaan 2, 6703HA Wageningen, THE NETHERLANDS XX RN [2] RP 1-2304 RX DOI; 10.1111/j.1432-1033.1992.tb17161.x RX PUBMED; 1511691. RA Bussink H.J., Buxton F.P., Fraaye B.A., de Graaff L.H., Visser J.; RT "The polygalacturonases of Aspergillus niger are encoded by a family of RT diverged genes"; RL Eur. J. Biochem. 208(1):83-90(1992). XX FH Key Location/Qualifiers FH FT source 1..2304 FT /organism="Aspergillus niger" FT /strain="N400" FT /mol_type="genomic DNA" FT /clone="pGW1g10, pGW1g11" FT /db_xref="taxon:5061" FT exon <663..926 FT /gene="pgaC" FT /number=1 FT CDS join(663..926,1002..1427,1484..1613,1667..1998) FT /gene="pgaC" FT /product="polygalacturonase" FT /EC_number="3.2.1.15" FT /db_xref="GOA:Q12554" FT /db_xref="InterPro:IPR000743" FT /db_xref="InterPro:IPR006626" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:Q12554" FT /protein_id="CAA45707.1" FT /translation="MVRQLILISSLLAAVAVRAPADPAHPMVTEAPDVNLVEKRATTCT FT FSGSEGASKASKSKTSCSTIYLSDVAVPSGTTLDLSDLNDGTHVIFQGETTFGYEEWEG FT PLVRVSGTDITVEGESDAVLNGDGSRWWDGEGGNGGKTKPKFFYAHDLTSSTIKSIYIE FT NSPVQVFSIDGSTDLTMTDITVDNTDGDTDDLAANTDGFDIGESTYITITGAEIYNQDD FT CVAINSGENIYFSASVCSGGHGLSIGSVGGRDDNTVKNVTFYDVNVLKSQQAIRIKTIY FT GDTGSVSEVTYHEIAFSDATDYGIVIEQNYDDTSKTPTTGVPITDFVLENIVGTCEDDD FT CTEVYIACGDGSCSDWTWTGVSVTGGSVSDDCLNVPSGISCDL" FT intron 927..1001 FT /gene="pgaC" FT /number=1 FT exon 1002..1427 FT /gene="pgaC" FT /number=2 FT intron 1428..1483 FT /gene="pgaC" FT /number=2 FT exon 1484..1613 FT /gene="pgaC" FT /number=3 FT intron 1614..1666 FT /gene="pgaC" FT /number=3 FT exon 1667..>1998 FT /gene="pgaC" FT /number=4 XX SQ Sequence 2304 BP; 536 A; 588 C; 585 G; 595 T; 0 other; ccatggctga aactttgccc ctgacctagt ccatttcatt ttatataatg ctgatgagat 60 atggttcttg cacaactatg cttttcctcg gtcggtgcgt aatgtatagt tcgtgggtgg 120 taaggaaatt caccgacagc aactcccagc ataacatgga gaagaaccga tgaatgagca 180 gcgacaaaca tggtaccaca attcttgaat aagcatttag actccggctt ggttttttcc 240 gttgcattgg cgctggtgtt gttcctgcgc acggtgcaac cgttatctcc accaatgatt 300 acctgcagaa agcccatggc tgcaaccacc cagccgactt gagtccacct aacagcatac 360 tcagcatact cgatgctggg aattacttca ggtatggtcg gctgaatatg cagtcgattt 420 ccggcgccag gaacagtccg gccccctcac cacggacata gacccgccac caaaacgtcg 480 atagcggcct cgcttcgtca acgaccattt tgcccacccc tgacacccag gaaagacgtc 540 ttccaataac aatataaaag ggcgagtctt gtcctctcac tttccgtctt tcgagtatgc 600 cttgccagtt cccaacttga cttgagacct cccatttcgg tcatttgtca cccgctataa 660 gaatggtccg tcagcttatc ctgatcagca gtctgctggc agctgttgct gtgcgcgcgc 720 ctgccgatcc ggctcatccc atggttacgg aagcgcctga cgtcaatttg gttgaaaaga 780 gggcgactac ttgcaccttc tcgggctccg aaggtgcatc caaggccagc aagtcgaaaa 840 cctcttgctc cacaatctac ctgtccgacg tggccgtccc atctggcaca acccttgatc 900 tctctgacct gaatgatgga acccacgtac gttccccggg tgattcatgt cttattctca 960 cacccaatcg cgtcaatagt actggctgac agatgtacta ggtgatcttc cagggagaaa 1020 ccacttttgg atacgaggaa tgggaagggc ctcttgtgcg tgtttctgga actgatatca 1080 cggtcgaggg ggagagcgac gcggtgctca atggcgatgg cagccgctgg tgggatggag 1140 agggtggcaa tggtggtaaa acaaagccca agttcttcta tgcccatgac ttgacctctt 1200 ccaccatcaa gagcatctac atcgagaact ctcctgtgca ggtgttcagc atcgatggct 1260 ccactgatct taccatgact gatatcacgg tggataacac ggatggtgac acggacgacc 1320 tcgccgccaa tacggatggc ttcgacatcg gggaaagcac ctatatcacg atcacaggtg 1380 ccgaaatcta caaccaagat gactgcgttg ccatcaattc tggagaggta tgcgtcccct 1440 ggcactgatt gagaggagag gcgccttgct gacgatctgg tagaacattt atttcagtgc 1500 cagtgtgtgt tctggtggtc acggcctgtc tattggctct gttggtggtc gggatgataa 1560 cactgtcaag aacgtgacgt tttatgatgt caatgttctc aagtcccagc aaggtaaggg 1620 aaagcatttg aaccatccgt ttgccgtcct ctaacgtatg ctttagcaat ccgtatcaag 1680 accatctacg gcgacactgg ctccgtcagc gaagtcactt accatgagat tgccttttcg 1740 gacgctactg attacggcat tgtcattgag cagaactatg atgacacctc caagacccct 1800 actaccgggg taccgatcac ggattttgtg ctcgagaaca tcgttggaac gtgtgaagat 1860 gatgattgta ccgaagtata cattgcctgc ggtgatggca gctgctcgga ttggacttgg 1920 actggcgtga gcgtgactgg cggcagtgtc agtgacgact gccttaatgt tccctccggg 1980 attagctgcg atttgtaggc cgttgtgatt gggggagatg ttcccgggta ctctggtcgt 2040 tcgtttagcc agccctttct gttgagtggc ctgttcttct atactgtcga ttgtgtgtga 2100 gattactacc ttgcccgagg aaagagcagt gcatcctatc ttttattctt tgccggtcgg 2160 ggttggccta ctagtacatt gtacccgaag agtcaacggt gaaagtaaag ggcttacaga 2220 attagtccag gagcaaagac aacttttatc agagcgcatc ggtcacgtca tgttgaaagt 2280 attgatcaat gaagataacc ttgg 2304 // |
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