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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X63355; SV 1; linear; genomic DNA; STD; PRO; 1530 BP.
XX
AC   X63355;
XX
DT   10-DEC-1991 (Rel. 30, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   C.thermocellum licB gene for beta-1,3-1,4-glucanase
XX
KW   beta glucanase; licB gene; lichenase.
XX
OS   Clostridium thermocellum
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
XX
RN   [1]
RP   1-1530
RA   Staudenbauer W.L.;
RT   ;
RL   Submitted (25-NOV-1991) to the EMBL/GenBank/DDBJ databases.
RL   W.L. Staudenbauer, Techn. Universitaet Muenchen, Lehrstuhl fuer
RL   Mikrobiologie, Arcisstrasse 21, D-W-8000 Muenchen, FRG
XX
RN   [2]
RP   1-1530
RX   DOI; 10.1111/j.1432-1033.1992.tb16600.x
RX   PUBMED; 1740123.
RA   Schimming S., Schwarz W.H., Staudenbauer W.L.;
RT   "Structure of the Clostridium thermocellum gene licB and the encoded
RT   beta-1,3-1,4-glucanase. A catalytic region homologous to Bacillus
RT   lichenases joined to the reiterated domain of clostridial cellulases";
RL   Eur. J. Biochem. 204(1):13-19(1992).
XX
DR   CABRI; DSM 1237.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1530
FT                   /organism="Clostridium thermocellum"
FT                   /strain="DSM 1237"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="lambda 1049"
FT                   /clone="LIC 42"
FT                   /db_xref="taxon:1515"
FT   -35_signal      82..87
FT   -10_signal      105..110
FT   sig_peptide     271..351
FT                   /gene="licB"
FT   CDS             271..1275
FT                   /transl_table=11
FT                   /gene="licB"
FT                   /product="lichenase"
FT                   /product="beta-1,3-1,4-glucanase"
FT                   /EC_number="3.2.1.73"
FT                   /db_xref="GOA:A3DBX3"
FT                   /db_xref="HSSP:1AJK"
FT                   /db_xref="InterPro:IPR008263"
FT                   /db_xref="UniProtKB/Swiss-Prot:A3DBX3"
FT                   /protein_id="CAA44959.1"
FT                   /translation="MKNRVISLLMASLLLVLSVIVAPFYKAEAATVVNTPFVAVFSNFD
FT                   SSQWEKADWANGSVFNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYG
FT                   YYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGKDTTKVQFNWYKNGVGGNEY
FT                   LHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRNIPVTPGKIMMNLWPGIGVDE
FT                   WLGRYDGRTPLQAEYEYVKYYPNGVPQDNPTPTPTIAPSTPTNPNLPLKGDVNGDGHVN
FT                   SSDYSLFKRYLLRVIDRFPVGDQSVADVNRDGRIDSTDLTMLKRYLIRAIPSL"
FT   mat_peptide     352..1272
FT                   /gene="licB"
FT                   /product="lichenase"
FT                   /product="beta-1,3-1,4-glucanase"
FT                   /EC_number="3.2.1.73"
FT   repeat_region   1084..1158
FT                   /rpt_type=DIRECT
FT   repeat_region   1189..>1530
FT                   /rpt_type=DIRECT
FT   repeat_region   1318..1338
FT                   /rpt_type=INVERTED
FT   repeat_region   1343..1363
FT                   /rpt_type=INVERTED
XX
SQ   Sequence 1530 BP; 468 A; 241 C; 306 G; 515 T; 0 other;
     tggatatatt gaaaataatt tgaatttttt gcaggtcaag aatttagaat gatattcttt        60
     tttatctagg cttggtttta gttgacaatc tgaagtttat aggatataat taaatcgaat       120
     taacgcgtgt tagtggctta aaatacaggg tttgacgttt atatatattt ctttgaattg       180
     ttacaggagc tttgctgaag tgttaatttt taccgccgct aaagtataaa aatatatttt       240
     atttatatta ttttacggga ggtatttttt atgaaaaaca gggtaatttc attattaatg       300
     gcttccttgc ttttggtttt gtcggtaatt gttgctcctt tttacaaagc ggaagccgca       360
     actgtggtaa atacgccttt tgttgcagtg ttttcgaact ttgactccag tcagtgggaa       420
     aaagcggatt gggcgaacgg ttcggtgttc aactgtgttt ggaagccttc acaggtgaca       480
     ttttcgaacg gtaaaatgat tttgaccctt gacagggaat atggcggttc atatccgtat       540
     aaaagcggtg aatatcgtac aaaatcattt ttcggatacg gttattatga agtaagaatg       600
     aaagctgcca aaaacgtagg aattgtttca tctttcttca cttatacagg accttcggac       660
     aacaatccat gggacgaaat cgatatcgag tttttaggaa aggacacaac taaagttcag       720
     ttcaactggt acaaaaatgg agtcggtgga aacgagtatt tgcacaatct tggattcgat       780
     gcttcccagg attttcatac atatggattt gaatggaggc cggattatat agacttctat       840
     gttgacggca aaaaagttta tcgtggaacc aggaacatac ctgttactcc cggcaaaatt       900
     atgatgaatt tgtggccagg aataggagtg gatgaatggt tgggacgtta cgacggaaga       960
     actcctttgc aggcggagta cgaatatgta aaatactatc ctaacggtgt tccgcaagat      1020
     aatcctactc ctactcctac gattgctcct tctactccga ctaaccctaa tttacctctt      1080
     aagggagacg taaacggcga cggtcatgtt aactcatcag actattcatt atttaaaaga      1140
     tatttgctca gggttattga tagattccct gttggagatc agagtgttgc tgatgtaaac      1200
     agggacggaa ggattgactc cacagacctt acaatgttaa agagatatct gatacgggca      1260
     attccgtcac tttgaaatta attcttctca aaaccccata aataaatcaa accccattat      1320
     aaaaactctg taatttatga aaataaatta cagagttttt atataatttt attaagcttt      1380
     ttatttataa gtttatgtta tccaaacact tctatttatg cgccattaat gataaaatat      1440
     atatgtggat agttttttgg ctaatccctt atatattctt tttgaattgt ttatacagtt      1500
     tagatacaaa aatggaacct gcagcatgtg                                       1530
//
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