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EBI DbfetchID X63266; SV 1; linear; genomic DNA; STD; PRO; 3610 BP. XX AC X63266; XX DT 13-JAN-1992 (Rel. 30, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 2) XX DE C.septicum gene for sialidase XX KW sialidase. XX OS Clostridium septicum OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-3610 RX DOI; 10.1007/BF00273603 RX PUBMED; 2034213. RA Rothe B., Rothe B., Roggentin P., Schauer R.; RT "The sialidase gene from Clostridium septicum: cloning, sequencing, RT expression in Escherichia coli and identification of conserved sequences in RT sialidases and other proteins"; RL Mol. Gen. Genet. 226(1-2):190-197(1991). XX RN [2] RP 1-3610 RA Schauer S.; RT ; RL Submitted (11-DEC-1991) to the EMBL/GenBank/DDBJ databases. RL Schauer S., Biochemisches Institut, Christian-Albrechts-Universitaet, RL Olshausenstr.40, D-2300 Kiel, Germany XX FH Key Location/Qualifiers FH FT source 1..3610 FT /organism="Clostridium septicum" FT /strain="NC0054714" FT /mol_type="genomic DNA" FT /db_xref="taxon:1504" FT repeat_region 355..379 FT /rpt_type=INVERTED FT promoter 361..385 FT promoter 408..423 FT repeat_region 424..433 FT /rpt_type=INVERTED FT RBS 456..465 FT CDS 473..3517 FT /transl_table=11 FT /product="sialidase" FT /EC_number="3.2.1.18" FT /db_xref="GOA:P29767" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR004124" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR011040" FT /db_xref="InterPro:IPR011490" FT /db_xref="InterPro:IPR013320" FT /db_xref="UniProtKB/Swiss-Prot:P29767" FT /protein_id="CAA44916.1" FT /translation="MNKKKIMSILVSAFLITNLSSNIIFADIKENVYINQYSEGNRSQP FT IAEKLVPRSEIQASATSALTGEGPEKAIDGNTSTLWHTPWAGVDIQINPQSLTLKLGKT FT RNISSICVTPRQEGTNGMITDYKIYSGDDVIAEGKWKSDSSDKYVVFDNPISTDNIRIE FT AISTVGDENNKHASIAEVEVYELADTPVKLAESNNKVINNGNGGNYEGDISEISLLEEG FT TAIIRFTNNGSSLFSISNNERTNEHFHVYINGGAIGYELRKQSGNLATGSVNKALNAGI FT NTIAFKAEKGKGYSIYLNGEKILTSSSITANFLSTLEGLNTLSLGKTDRPSGSNEYNFT FT GEIDFFELYSKPLADRYLKERTGETTSKDLPFPEGAVKTEPVDIFTPGELGSNNFRIPA FT LYTTKDGTVLASIDVRKGGGHDAPNNIDTGIKRSTDGGVTWDEGKIILDYPGASSAIDT FT SLLQDDETGRIFLIVTHFAEGYGFGNSKTGSGYVEIEGKRYLKLLGANDTIYTVREGVV FT YDSNGEATNYTVDNNNELYENGNRIGNVLLSNSPLKVMGTSFLSLIYSDDDGQTWSDPI FT DLNKEVKTDWMRFLGTGPGKGHQIKTGRYAGRLLFPVYLTNASGFQSSAVIYSDDNGAT FT WNIGETATDGRLMDNGDRASAETITTNTSGGVGQLTECQVVEMPNGQLKMFMRNTGGNS FT GRVRIATSFDGGATWEDDVVRDENIKEPYCQLSVINYSQKIDGKDAIIFAIPDANYPNR FT VNGTVRVGLITENGSYENGEPRYDIEWRYNKVVAPGTYGYSCLSEMPNGEIGLFYEGRG FT SRQMSFTRMNIDYLKADLLQDVPAANIKSYTTNSENNIYDPGDKISLNVTFDQTVSLIG FT DRTITADIGGKEVLLTLANSKGGSEYTFEGTVPADISNGNYTITIKGKSGLKIVNVVNK FT VTDITEDRNTGLNVQVGEEVQSVDKTLLQDLVDSTSNLIKEDYTEESWILYEKALEVAN FT KFLVNEIAVQEEVDAAKPTLENAYK" XX SQ Sequence 3610 BP; 1482 A; 364 C; 693 G; 1071 T; 0 other; ctgcaggtgg attaactctt aaaaagaagt gtaaaaagaa ataatattta aatttaatta 60 ctgtattgaa gcatatagag ttcaatataa ttatttaaaa aagttatatg atgaactcta 120 aggataataa atataaggat atgttagaag aattgaaaga agattatgag accaatttgc 180 aaataagtaa attctaaagc taaatatatg aaaaatcagt taaaagaaaa tatagatatt 240 ttgtgaattt aaatttattt tttagattat agttaatatt gttagtcgtg ttaaataggt 300 atataactta tttaatacga ctatcttttt caaagaaata ttaaaatttg gtggtataaa 360 ttgtaaacaa gcaatttatt tatataaaaa aagcaattta cttgttattg ataaaattct 420 tatatgttaa aattaacatg catttacaat aaagtaaaga ggtggtaatt atatgaataa 480 gaaaaagatt atgtcaatat tagtatctgc ttttttaata actaacttat caagtaatat 540 aatttttgct gacattaaag agaatgttta tattaatcaa tattcagagg ggaataggtc 600 acaaccaatt gcagaaaaat tagttcctag atcagaaatt caagcaagtg caacatcagc 660 tcttacagga gaaggacctg aaaaagctat agatggtaat acgtccacac tttggcatac 720 tccatgggct ggcgtagata ttcaaattaa tcctcaaagc ttaacattaa aattggggaa 780 aactagaaat atttcatcta tttgcgtaac tccaagacaa gagggaacta atggaatgat 840 aacggattat aaaatttact caggagatga tgtaattgca gaaggaaaat ggaaatcaga 900 ttcatcagat aaatatgtag tttttgataa tcctatatca acagacaata taagaattga 960 ggctatatca actgttgggg atgagaataa taagcatgct agtatagcag aagtggaagt 1020 ttatgaactt gctgatactc cggttaaatt agcagaaagt aataacaaag ttatcaataa 1080 tggaaatggt ggaaattatg aaggtgatat atcagaaatt tcattattag aagagggaac 1140 tgcaataatt agatttacta ataatggttc aagcttattt agtattagta ataatgaaag 1200 aacaaatgaa cattttcatg tatatataaa tggaggagct attggatatg aattaagaaa 1260 acaaagtgga aatttagcaa caggtagtgt aaataaggca ttaaatgcag gaataaatac 1320 aattgccttt aaagcagaga aagggaaagg atattctatt tacttaaatg gagaaaagat 1380 attaactagt agtagtataa cggctaattt tttatcaaca ttagaaggtt taaatacttt 1440 aagtttagga aaaactgata gaccgtctgg atctaatgaa tataatttta caggagaaat 1500 agattttttt gagttatatt caaaaccatt agcagatagg tatttaaaag agagaactgg 1560 agaaactaca tcaaaggatt taccatttcc agaaggtgca gtaaaaacag aacctgttga 1620 tatatttact ccaggagaat taggaagcaa taattttaga atacctgctt tatatacaac 1680 taaagatggt acagttttag catctataga tgttagaaaa ggtggaggac atgatgcccc 1740 taataatatt gatacaggaa taaaaaggag tacagatgga ggtgtaactt gggatgaagg 1800 aaaaataata ttagattatc ctggtgcatc ttcagctata gatacatcat tactccaaga 1860 tgatgaaaca ggaagaatat ttttaatagt aactcatttt gcagaaggat atggatttgg 1920 aaattctaaa acaggaagtg gatatgtaga aatagaaggt aaacgttatc ttaaattatt 1980 aggagctaat gatactattt atacagtaag agaaggtgtt gtgtacgata gtaatggaga 2040 ggctacaaat tatacagtag ataacaacaa tgagctttat gaaaatggta atcgtatagg 2100 taatgtttta ttaagtaatt caccgttaaa agtaatggga acatcatttt tatcattaat 2160 ttatagtgat gatgatggac aaacttggag tgatccaata gatttaaata aagaagtaaa 2220 gacagactgg atgagatttc taggaacagg tccaggaaaa ggacatcaaa taaaaactgg 2280 tagatacgca ggaagattat tattccctgt atatttaaca aatgcatctg gtttccaatc 2340 aagtgctgtt atatatagtg atgataatgg tgcaacttgg aatataggag aaacagctac 2400 tgatggtaga ttaatggata atggagatag agctagtgca gaaacaataa caacaaatac 2460 aagtggtgga gtaggacaat taacagaatg tcaagttgtt gaaatgccaa atggacagtt 2520 aaaaatgttt atgagaaata ctggaggaaa tagtggacgt gtaagaatag caacaagctt 2580 tgatggagga gcaacttggg aagatgatgt agtaagggat gaaaatataa aagaacctta 2640 ttgtcaacta agtgttatta attacagtca aaagatagat ggtaaagatg ctataatttt 2700 tgcaattcca gatgctaatt atccaaatag agtaaatgga actgttagag taggtttaat 2760 aactgaaaat ggatcttatg aaaatggtga accacgttat gatattgagt ggagatataa 2820 taaagtagtg gcaccgggaa cttatggata ttcctgttta tcagaaatgc caaatggtga 2880 aattggatta ttctatgaag gtagaggaag cagacaaatg tcctttacta gaatgaatat 2940 agattattta aaagcagatt tattacaaga tgtaccagct gccaatataa aatcatatac 3000 aacgaatagt gaaaataata tttatgatcc gggagataaa atatctttaa atgtaacttt 3060 tgatcaaaca gtatcactta taggtgatag aactataaca gctgatattg gaggaaaaga 3120 agttttatta actttagcta atagtaaagg tggatccgaa tatacatttg aaggaacagt 3180 accagctgat atatcaaatg gtaattatac tataactata aaaggaaaat caggtttaaa 3240 gatagttaat gtagttaata aggtaacaga tataactgaa gatagaaaca caggcttaaa 3300 tgtacaagtt ggagaagaag ttcaatcagt agataaaact ttattgcaag atttggtaga 3360 tagtacatct aatctaataa aggaagatta tacagaagaa agctggattt tatatgaaaa 3420 agctttggaa gtagcaaata aatttttagt aaatgaaatt gcagtgcaag aagaggttga 3480 tgctgcaaaa cctacattag aaaatgctta taaataattt aactaaaaaa gaaacagatg 3540 aagtttttaa aaggcattta gaaatagcag tagaagaagc agaaaaaata actgataaag 3600 aattagaaaa 3610 // |
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