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EBI Dbfetch

ID   X61122; SV 3; linear; genomic DNA; STD; PRO; 5779 BP.
XX
AC   X61122;
XX
DT   09-OCT-1992 (Rel. 33, Created)
DT   27-APR-2004 (Rel. 79, Last updated, Version 7)
XX
DE   Escherichia coli genes for eco57IM endonuclease and methyltransferase
XX
KW   endonuclease; methyltransferase.
XX
OS   Escherichia coli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
XX
RN   [1]
RC   revised by [3]
RA   Vaisvila R.;
RT   ;
RL   Submitted (30-JUL-1991) to the EMBL/GenBank/DDBJ databases.
RL   R. Vaisvila, Inst. of Applied Enzymology Fermentas, Fermentu 8, Vilnius
RL   232028, LITHUANIA.
XX
RN   [2]
RP   1-5779
RX   DOI; 10.1093/nar/20.22.6051
RX   PUBMED; 1334261.
RA   Janulaitis A., Vaisvila R., Timinskas A., Klimasauskas S., Butkus V.;
RT   "Cloning and sequence analysis of the genes coding for Eco57I type IV
RT   restriction-modification enzymes";
RL   Nucleic Acids Res. 20(22):6051-6056(1992).
XX
RN   [3]
RC   revised by [4]
RA   Janulaitis A.;
RT   ;
RL   Submitted (02-MAR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Janulaitis A., UAB Fermentas, Graiciuno 8, LT-00241 Vilnius, LITHUANIA.
XX
RN   [4]
RP   1-5779
RA   Janulaitis A.;
RT   ;
RL   Submitted (04-MAR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Janulaitis A., UAB Fermentas, Graiciuno 8, LT-00241 Vilnius, LITHUANIA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..5779
FT                   /organism="Escherichia coli"
FT                   /strain="original strain RFL57 cloned in RRI"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:562"
FT   -35_signal      634..640
FT                   /note="methyltransferase"
FT   TATA_signal     657..662
FT                   /note="methyltransferase"
FT   RBS             687..690
FT                   /note="methyltransferase"
FT   CDS             696..884
FT                   /transl_table=11
FT                   /note="SORF"
FT                   /db_xref="UniProtKB/Swiss-Prot:P25287"
FT                   /protein_id="CAA43432.1"
FT                   /translation="MAKGESERIVLEVEPELKKALYSVLAMEQKTLKDWFVDKAQEHIC
FT                   EKKSELIERFSKVDNEI"
FT   CDS             874..2508
FT                   /transl_table=11
FT                   /product="methyltransferase"
FT                   /db_xref="GOA:P25240"
FT                   /db_xref="InterPro:IPR002052"
FT                   /db_xref="UniProtKB/Swiss-Prot:P25240"
FT                   /protein_id="CAA43433.1"
FT                   /translation="MKFKADQTSQKLRGGYYTPQNLADYVTKWVLSKNPKTILEPSCGD
FT                   GVFIQAIANNGYNSNIELFCFELFDTEASKALERCKLNNFSNATITEGDFLVWANECLK
FT                   KNKQIFDGALGNPPFIRYQFLERNFQEQAQLVFEHLDLKFTKHTNAWVPFLLSSLALLK
FT                   QGGRIGMVIPSEISHVMHAQSLRSYLGHVCSKIVIIDPKEIWFEDTLQGAVILLAEKKQ
FT                   YPDEASQGVGIVSVSGFEFLQEDPNVLFNDTAGINGETVEGKWTKATLSIDELQLIKRV
FT                   IAHPDVRKFKDIAKVDVGRYCDGANNYFLVDNETVKLYKLERFAHPMFGRSQHCPGIIY
FT                   DEKQHIENQEKGLPTNFLYIDEEFEYLSKSVKNYIKLGEVEEYHKRYKCRIRKPWFKVP
FT                   SVYSTEIGMLKRCHDAPRLIHNRVRAYTTDTAYRVSSTVTSTENLVCSFLNPITVITAE
FT                   LEGLFYGGGVLELVPSEIEKLYILIVEGLEHNVEELNLLIKDGQIERVIRQQGSLILGT
FT                   LGFTQEENEKLVEIGRSLEIEGYVSRV"
FT   CDS             complement(2570..5566)
FT                   /transl_table=11
FT                   /product="endonuclease"
FT                   /db_xref="GOA:P25239"
FT                   /db_xref="InterPro:IPR007409"
FT                   /db_xref="UniProtKB/Swiss-Prot:P25239"
FT                   /protein_id="CAA43434.3"
FT                   /translation="MNKKDQLQRLIDKYKSDIDYYRSARYNETQLRTDFLDQLFLILGW
FT                   DITNAAGKPTNEREVLVEEGLKARAGENTKKPDYTFRLFSERKFFLEAKKPSVDISTTI
FT                   EPALQVRRYGFTAKLKISVLSNFEYTAIYDCSNQVKETDSVANSRIKLYHFTELVDKFD
FT                   EINNLIGRESVYTGHFDNEWSEIENKILRFSVDDLFLKQINDWRLLLANEFLQIKNELP
FT                   EEKLNDLVQNYINSIVFLRVCEDRDLEEYETLYHFAQDKDFQSLVKKLKSSDKKYNSGL
FT                   FSLEYIDELLSNANSCIWSIIEQLYFPQSTYSFSVFSSDILGNIYEIFLSEKVRIDELG
FT                   NVKIQPKEEHIDRDVVTTPTHIVKEIIRNTVVEYCKGKSDIEILNSKFADIACGSGAFI
FT                   IEAFQFIQDILIDYYIQNDKSKLQQISEHTYKLKFEVKREILCKCIYGIDKDYNATKAC
FT                   TFGLLLKLLEGETTETIGKDTPILPALDTNILFGNSLIDSGDKVKQEDIFSINPFDLTN
FT                   YQFDVIVGNPPYMATEHMNQLTPKELDIYKRKYKSAYKQFDKYFLFIERSIQILKEYGY
FT                   LGYILPSRFIKVDAGKKLRKFLSENKYLSKLISFGSHQVFKNKTTYTCLLFLNKENHDN
FT                   FSFYEVKDFKKWLTREDKYLLSSTYQTSSLDSDTWVLEKKINDILKLMFSKSEQLGNIV
FT                   GKSNVANGIQTSANKYYIHKEIKSENGFIYFEYDGIEYHIEKELTRPYFETNRSGDDSF
FT                   YTYKDVEPNSFVVYPYKKVGERIQFIEYDELKRQYPKLFEFLQVVKVHLNDKKRSIKPD
FT                   PTGPNEWYRYGRSQALENCDVDQKLIVGILSNGYKYSIDNHRTFVSSGGTAGYSIINIP
FT                   NNVRYSIYYIQAILTSKYLEWFASIYGDIFRGRFVARGTKVQTRMPIPTIDFDDPKQKE
FT                   IHDTISSKQQYLNKLYSQTQKSADRDKIIFERQFEQEKIQMDYLIKNLFDLGDLDSEIP
FT                   TVEDLYKNL"
FT   RBS             complement(5573..5576)
FT   TATA_signal     complement(5609..5615)
FT                   /note="endonuclease"
FT   -35_signal      complement(5643..5648)
XX
SQ   Sequence 5779 BP; 1832 A; 985 C; 1030 G; 1932 T; 0 other;
     taaagtgtgg ttttaggccg aatttcaatt gattcatcat ttgtggaatg taactaatcg        60
     acatgcttcc caaacagaaa aatcgcttct attcccaaca gaaattttac gaacatgagc       120
     gcaattattt ctctgctagg ataattggtt tttagtaaat cgctacagca ggcaattgcc       180
     aatataaaaa tctggcacaa gggtgaacag cgcgcgccac ataatccatt gttattgcta       240
     tatattagcg gaatacataa atgaacagcc acgtcttttc gattatggtc gaaaatctac       300
     gaacctctgc acagtttacg tagaactttt tttggccaca gagttcacag taccggccta       360
     tatcgtggcg cttgaaggaa gatagagaaa gattaaagat ggtggatatt gagttatgca       420
     aaactgcaac ttggataatg cagtgctact gcggcccgat tttggcagta tctttagtat       480
     attcagagcg gtatagcctt acacttttat tccgttcggc tttactgcta agatatatgg       540
     ctctgcagag ccttcccctt accatattgg ctagggattc ttctgacttt tcaaacggtt       600
     gaaaagaatg ctgaaaggca agccagtttt ttctttagaa gctctgaaaa cccatgtatt       660
     atatgtaaca taacatataa tacatgggtg ttaatatggc aaaaggtgaa tcagaaagaa       720
     tcgtcctaga ggttgagcca gaactaaaaa aagctctcta ttcagttctt gcaatggaac       780
     aaaaaactct taaagactgg tttgttgata aggctcaaga acatatatgc gagaaaaaat       840
     cagagctcat agagagattt tcgaaggtag acaatgaaat ttaaagcaga tcaaacctca       900
     caaaaactta gaggtggcta ttacacccca caaaatttag ctgattatgt aactaaatgg       960
     gtcttaagta agaatcctaa aaccatactt gagccgagtt gtggtgatgg tgtgtttatt      1020
     caggctattg ctaataatgg ttataactct aacattgagt tattttgctt tgaattgttc      1080
     gacactgaag catctaaggc tctcgaacgc tgtaaactga acaatttttc taatgcaacg      1140
     attactgagg gggattttct agtctgggct aatgaatgtc ttaagaaaaa taagcagata      1200
     tttgatggag ctttaggtaa tcctccattc atccgttatc agttccttga aagaaatttc      1260
     caagaacaag ctcagttggt cttcgaacat ttagatctaa aatttacaaa gcacactaat      1320
     gcttgggttc cattcttact ttcttcatta gcccttctca aacaaggtgg aagaataggg      1380
     atggtcatac catcggagat tagtcatgta atgcacgctc aatcattgag aagctactta      1440
     ggtcatgttt gctctaagat tgtcatcatt gaccctaaag agatttggtt tgaagataca      1500
     ttacaggggg ccgttattct ccttgcagag aaaaagcaat atccagatga agcatcgcaa      1560
     ggtgtaggta ttgttagtgt tagtggtttt gaattccttc aagaagatcc aaacgttctg      1620
     tttaatgata cggcaggaat aaatggtgaa acagttgaag gtaaatggac taaagcaaca      1680
     ctcagtattg acgagcttca gctaattaaa cgggtaattg ctcatccaga tgttcgtaaa      1740
     tttaaagata tagctaaagt tgatgtaggt aggtattgtg acggggccaa taattatttt      1800
     cttgttgata atgaaacagt taaattatat aaattagaac gttttgctca ccctatgttt      1860
     ggcagaagcc aacattgccc cggaattatt tatgatgaga agcagcacat tgaaaaccag      1920
     gaaaagggtt taccaaccaa ttttttatat atagatgaag agtttgaata tctttctaaa      1980
     agtgtcaaaa attacataaa gttaggtgaa gtagaggaat accacaagcg ttataagtgc      2040
     cgtatacgta agccttggtt caaggtccca tctgtatata gcacagagat tggaatgtta      2100
     aagcgttgtc acgatgcgcc acgcttaatt cataacagag ttagagcata taccactgat      2160
     actgcatata gagtttcttc aacagttact agtactgaga acttagtgtg tagttttttg      2220
     aaccctataa cggtcattac agccgaactc gaaggactct tttacggcgg tggcgttctt      2280
     gaacttgtcc catccgagat agaaaaacta tatatcctta tcgttgaagg attagaacat      2340
     aacgttgaag aacttaacct attgattaaa gatggtcaaa tagagagggt aattcgacaa      2400
     caaggttcac taatcttagg cacgcttggt ttcactcaag aagaaaatga aaaacttgta      2460
     gaaataggaa gaagcttaga gatagaaggc tacgtaagta gggtttaaaa agtcgggggc      2520
     tcataaaaaa tcagtgcagc ttttagctca ttgattttat ctggtaacct tataggtttt      2580
     tgtatagatc ttctactgtt ggaatctcgg aatctaaatc ccccaagtca aaaagattct      2640
     taatcaaata atccatttgg attttttctt gttcaaattg cctttcgaat atgattttat      2700
     ctctatcagc tgatttttga gtttggctat acagtttatt caaatactgt tgctttgaac      2760
     tgatcgtatc atgtatttct ttctgttttg gatcatcaaa atcaatagta ggaataggca      2820
     ttctagtttg aacttttgtc ccacgagcaa caaatctacc tctaaaaata tcaccatata      2880
     ttgaagcaaa ccactcaagg tactttgatg taaggattgc ttggatataa tagatagagt      2940
     atctaacgtt attaggaatg ttgataatgc tatagcccgc agtgcctcca gaagaaacaa      3000
     aagttctatg gttatcaatg ctgtacttat atccattaga tagaatacca acaatcagct      3060
     tctgatcaac atcgcagttt tctaatgctt ggctacgccc gtatctgtac cattcattag      3120
     gcccagttgg gtcaggctta atagagcgtt tcttatcatt caaatggact tttacaacct      3180
     gcaggaactc aaataactta ggatattgac gttttagttc atcgtattca atgaactgga      3240
     ttctttcacc cactttcttg tatgggtaaa caacaaatga attaggttca acgtctttat      3300
     aagtatagaa actatcatca cctgaacgat tcgtttcgaa gtaagggcga gttaattcct      3360
     tttcaatgtg gtattcaatt ccatcatatt caaaataaat aaaaccattt tcagatttga      3420
     tttctttatg aatgtagtat ttatttgcac ttgtctgaat gccatttgca acattacttt      3480
     ttcctacaat gttacctagc tgttcagatt ttgaaaacat tagcttcaaa atgtcattga      3540
     ttttcttttc tagaacccaa gtgtcagaat caagagaact ggtttgatat gtgcttgata      3600
     ataaatattt atcttcacga gttaaccact tcttgaagtc ttttacttca taaaaagaaa      3660
     agttatcgtg attttcttta tttaaaaata acaaacaagt gtaagtcgtt ttattcttga      3720
     atacttgatg agaaccaaaa gaaataagtt tagataaata tttattttct gataaaaact      3780
     tgcgtagttt tttacctgca tctactttta tgaacctaga cggaagaata tagcctaaat      3840
     agccgtactc tttaagaatt tgtattgaac gctcaataaa taaaaagtat ttatcgaatt      3900
     gcttataagc agatttatat ttcctcttgt aaatatctaa ttcctttggt gttaactgat      3960
     tcatatgctc agtcgccata taaggaggat ttccaacgat cacatcaaat tggtagttag      4020
     tcaaatcaaa tggattaatt gaaaaaatat cttcttgttt aactttgtct ccactatcta      4080
     tcaagctatt cccgaataga atgttcgtat ccagtgcagg caaaataggg gtgtctttac      4140
     caatggtttc tgtagtttcg ccttcgagaa gctttagcaa taaaccaaag gtacaagctt      4200
     ttgttgcatt atagtcttta tcaatcccat atatacattt acatagaatt tctcttttta      4260
     cttcaaattt aagtttgtat gtatgttcag atatttgctg aagtttagat ttgtcatttt      4320
     gtatataata atcaataaga atatcctgga tgaattggaa tgcctcaata ataaaagcac      4380
     ctgagccaca agcgatatca gcaaattttg aattcaatat ctcaatatct gacttgcctt      4440
     tgcaatattc tacgacagta tttctaatga tttcttttac aatatgagtt ggtgtagtaa      4500
     caacgtctct atcgatatgt tcctctttcg gttgaatctt aacgtttcca agttcatcaa      4560
     tacgaacttt ctcactcagg aatatttcat atatattacc taaaatatca gaagagaaaa      4620
     cagagaaaga gtatgtgctt tgtgggaagt ataattgttc tatgatgctc caaatgcaag      4680
     agttagcatt gcttaataac tcatcaatat attctagcga gaataatcct gaattatatt      4740
     tcttgtctga ggatttcaat tttttgacta aagattgaaa atccttatct tgtgcaaagt      4800
     gataaagagt ttcgtattct tccaagtctc tatcttcaca gactctaagg aaaacaatac      4860
     tgttaatata attttgtaca agatcattta atttttcttc tggaagttcg ttttttatct      4920
     gcaaaaattc attagcaaga agtaagcgcc aatcattaat ttgcttgagg aatagatcat      4980
     caacactgaa tctcagtatc ttattttcaa tttctgacca ttcattgtca aaatgaccag      5040
     tgtaaacact ttctcgaccg ataagattat taatttcatc aaacttatct acgagttcag      5100
     tgaagtgata caacttgatt ctagagtttg ctactgaatc agtttcttta acctgattag      5160
     agcaatcata aattgccgta tactcgaaat tcgacaacac agaaattttt aatttggctg      5220
     tgaatccgta tcgtctaact tgtagagctg gttctatagt agttgatata tcaacactag      5280
     gctttttggc ttcaaggaaa aatttacgct cagagaagag tctaaacgtg tagtctggct      5340
     ttttagtatt ttcgcctgct cgggctttta aaccttcctc tacaagcact tcgcgttcgt      5400
     ttgttggttt tcctgctgcg ttcgttatgt cccaaccgag aataaggaat agttgatcta      5460
     aaaaatccgt tcttagttga gtttcgttgt atctggcaga acgataataa tcaatatcgc      5520
     ttttgtattt atcaattagt ctttgtaact gatctttttt attcatctat ttctcacaac      5580
     gatatttatc aaaaagtaga tttctaatga ttgtaattct tgtaccgaag tattgttagt      5640
     caagttatcc taacagttcc attctttacg tctcttgttg tgctgcacag attttgctgt      5700
     cactattttt acctcaaaaa ccacagtaac actaccaata ggtggctttt cgatgatgac      5760
     tgcaaggaaa gtgtggtat                                                   5779
//


  
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