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EBI Dbfetch

ID   X60752; SV 1; linear; genomic DNA; STD; PLN; 5399 BP.
XX
AC   X60752;
XX
DT   08-JUL-1992 (Rel. 32, Created)
DT   23-OCT-2008 (Rel. 97, Last updated, Version 8)
XX
DE   O.sinensis chloroplast ATPase subunits
XX
KW   ATP; ATP synthase; atpA gene; ATPase; atpD gene; atpF gene; atpG gene;
KW   atpH gene; atpI gene.
XX
OS   Odontella sinensis
OC   Eukaryota; stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Biddulphiophycidae; Eupodiscales; Eupodiscaceae; Odontella.
OG   Plastid:Chloroplast
XX
RN   [1]
RP   1-5399
RA   Pancic P.G.;
RT   ;
RL   Submitted (27-JUN-1991) to the EMBL/GenBank/DDBJ databases.
RL   P.G. Pancic, Institut f Biochemie der Pflanzen, Heinrich Heine Universitaet
RL   Duesseldorf, Geb 26.03, Universitaetsstr 1, 4000 Duesseldorf, Federal
RL   Republic of Germany
XX
RN   [2]
RP   1-5399
RX   DOI; 10.1016/0022-2836(92)91017-J
RX   PUBMED; 1532839.
RA   Pancic P.G., Kowallik K.V., Stromann H.;
RT   "Chloroplast ATPase genes in the diatom Odontella sinensis reflect
RT   cyanobacterial characters in structure and arrangement";
RL   J. Mol. Biol. 224(2):529-536(1992).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..5399
FT                   /organism="Odontella sinensis"
FT                   /organelle="plastid:chloroplast"
FT                   /map="LSC-region"
FT                   /mol_type="genomic DNA"
FT                   /dev_stage="vegetative cell"
FT                   /clone_lib="OsCp-Fragment-Bank"
FT                   /clone="pOsp5 pOsX8"
FT                   /cell_type="unicellular"
FT                   /db_xref="taxon:2839"
FT   CDS             53..808
FT                   /transl_table=11
FT                   /note="ORF 756"
FT                   /db_xref="GOA:Q00830"
FT                   /db_xref="InterPro:IPR010230"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00830"
FT                   /protein_id="CAA43151.1"
FT                   /translation="MNTNYPILEIKNLKACINENEILKDLNLKIHKGEIHAIMGPNGSG
FT                   KSTFSKVLAGHPAYNILSGDILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNEDF
FT                   LRLAYNSKQKFLNKDEVDPISFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRNEIL
FT                   QMILLDSELSILDETDSGLDIDALKIISKGINTFMNQNKAIILITHYQRLLDYVQPNYV
FT                   HVMQNGKIIKTGTADLAKELESKGYEWLK"
FT   CDS             936..1664
FT                   /transl_table=11
FT                   /gene="atpI"
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00825"
FT                   /db_xref="HSSP:1C17"
FT                   /db_xref="InterPro:IPR000568"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00825"
FT                   /protein_id="CAA43152.1"
FT                   /translation="MYPDNFYSSTFTLLAEAEVGKHFYWDIAGFLVHGQVLVVVWFVLA
FT                   LLLLFAVLGTRDIDRIPNSWQNFAESAVDFVTDIARDQLGESFYREWVPFIGTLFLFIF
FT                   GCNWAGAIIPWKLIELPEGELAAPTNDINTTVALALLTSLAYFYAGLSKKGFGYFKRYI
FT                   QPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTITVLTSLVPLVIPLPIMALGIFAG
FT                   SVQALIFSTLAAAYIAEALE"
FT   CDS             1734..1982
FT                   /transl_table=11
FT                   /gene="atpH"
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00824"
FT                   /db_xref="InterPro:IPR000454"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00824"
FT                   /protein_id="CAA43153.1"
FT                   /translation="MDSIISAASVIAAGLAIGLAAIGPGIGQGNAAGQAVEGIARQPEG
FT                   ENKIRGTLLLSLAFMEALTIYGLVVALALLFANPFNG"
FT   CDS             2094..2564
FT                   /transl_table=11
FT                   /gene="atpG"
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00823"
FT                   /db_xref="InterPro:IPR002146"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00823"
FT                   /protein_id="CAA43154.1"
FT                   /translation="MVNLSIIISSSEVNGPGGLFDINATLPLVAIQFLLLMVLLNVILY
FT                   SPLLTIIEERKEYILNKLAKASEILSQANELTAQYEQELNTVRKEAQLEITNSQKIHKE
FT                   ILEIELNISQKYIDNLLENITDDLLEKKNTALNSLDTIVQSLCVQIENRLSI"
FT   CDS             2628..3167
FT                   /transl_table=11
FT                   /gene="atpF"
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00822"
FT                   /db_xref="InterPro:IPR002146"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00822"
FT                   /protein_id="CAA43155.1"
FT                   /translation="MENFNQIFTLLAENEGIGLNTDILETGIINIAALVGILIYAGRDF
FT                   LGSFLEQRKTSIVQGVQDAEGRLEEANRRLSEAQKQLSQAHIVISEIKNETISAKKVLL
FT                   ESDAYQAKKDLTTRFSRALATFRSKERQIFLEVKEQIILLVLKRTVARAQQTFGPKERA
FT                   TALITETINKLEGDLL"
FT   CDS             3164..3727
FT                   /transl_table=11
FT                   /gene="atpD"
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00821"
FT                   /db_xref="InterPro:IPR000711"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00821"
FT                   /protein_id="CAA43156.1"
FT                   /translation="MSINPLASKIAAPYARALFDFSVDQNLMHQITADFQNLEVFLNKT
FT                   PDLTEYLSNPLISAKSKEEVLNKTLKSQINKETFKFLIVLVNRSRINLLEPIIASYLNL
FT                   VYNAASVKMIEVSTAYAFTNLQKNTLIKKLKELTNAREIRLVITVDSSLIGGFLIKTNS
FT                   KVLDFTIKNQLQKLAKHLDSVLEI"
FT   CDS             3775..5286
FT                   /transl_table=11
FT                   /product="adenosinetriphosphatase"
FT                   /EC_number="3.6.1.3"
FT                   /db_xref="GOA:Q00820"
FT                   /db_xref="HSSP:1KMH"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00820"
FT                   /protein_id="CAA43157.1"
FT                   /translation="MINIRPDEISSIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYGL
FT                   DQVMSGELLEFEDKTIGIALNLENDNVGVVLMGNGRQILEGSTVKTTGQIAQIPTGEAF
FT                   LGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRG
FT                   QRELIIGDRQTGKTAIAVDTIINQKTEDVVCVYVGVGQKASTVAQVVNVLEEKEAMAYT
FT                   IIVCASANDPATLQYIAPYAGAALAEYFMYNGKATLVIYDDLTKQAMAYRQMSLLLRRP
FT                   PGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPVIETQASDVSAYIPTNVISITD
FT                   GQIFLSNDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEAFSQF
FT                   ASDLDEATQKQLARGTRLREVLKQPQNSPLSVAEQVALIYTGINGFLDELEVASVKKYC
FT                   ASLLSFLNTSNNSYIGIVSSTNQFTAEAETALKEAISESKAVFMK"
FT   repeat_region   5321..5349
FT                   /rpt_type=INVERTED
FT   repeat_region   5360
FT                   /rpt_type=INVERTED
XX
SQ   Sequence 5399 BP; 1891 A; 740 C; 911 G; 1857 T; 0 other;
     ctgcagaagc agatcgttta ttaactttaa aattagaagg aagtgtcggt taatgaatac        60
     aaactatcct atattagaaa ttaaaaattt aaaagcttgt attaatgaaa atgaaatttt       120
     aaaagattta aatttaaaaa ttcataaagg tgagattcac gcaataatgg gacctaatgg       180
     ttctggaaag agcacatttt caaaagttct tgcaggtcat cctgcttaca atattttaag       240
     tggtgatatt ttatttaaag gatctagtat tcttaattta gatccggaag agcgttcaca       300
     tatgggaatc tttttagcat ttcagtatcc aattgaaatt cctggtgtta gtaacgaaga       360
     ttttttgcgt cttgcttata attcaaaaca aaaattttta aataaagatg aagttgatcc       420
     gatttcattt tttactataa tcaatgagaa attaaaactt gttgatatgt caccagtttt       480
     tttaagccga aatgttaatg aagggttttc tgggggtgaa aaaaagagaa atgaaatttt       540
     acaaatgatc ttattagact cagaattatc aattttagat gaaacagact ctggtttaga       600
     cattgatgct ttaaagatca tatcaaaagg tattaataca tttatgaatc aaaataaagc       660
     aattatttta ataacacatt accagagatt actagattat gttcagccta attatgtcca       720
     tgtaatgcaa aatggtaaaa taataaaaac aggtactgct gatttagcta aagaattaga       780
     gagtaaaggt tatgaatggt taaaataagt aataaagatt aaaaaagaga gcttttagat       840
     aaaaataaac ctaaaattag taaaaagtta ttatactata tattgttcct gtatattttt       900
     taatattggg taatttacta aattagttaa attttatgta cccagataat ttttattcaa       960
     gtacgtttac actattagcg gaggcagaag tcggaaaaca cttttactgg gatattgcag      1020
     gctttttagt acatgggcaa gtcttagtgg tagtctggtt tgtgttagct cttttactac      1080
     tatttgcagt tttaggtacg cgcgacatag accggatccc aaatagttgg caaaattttg      1140
     ccgaatcagc tgttgacttt gttactgata ttgctagaga ccaattaggt gaaagtttct      1200
     atagagaatg ggttccattt attggtacat tattcttatt tatttttgga tgtaattggg      1260
     ctggtgcaat tattccgtgg aaattaattg agttaccgga aggcgaactt gccgctccaa      1320
     ctaatgatat taatacaacg gtggcattag cgttattaac atctcttgcc tatttctatg      1380
     ctggtttaag taaaaaaggg ttcggatatt tcaaacgata tattcaacca attccacttc      1440
     ttctacctat taatatttta gaagatttta cgaaaccatt atcgctaagc ttccgattat      1500
     ttggaaatgt tttagcagat gaattaacta ttactgtatt aacatcgtta gttccattag      1560
     taattccatt accaattatg gcattaggga tttttgcagg ttcagtacaa gctttaattt      1620
     tctcaacatt agctgctgct tatatcgccg aagctcttga gtaaattaaa attaaattcg      1680
     attttttaaa attatatttt tattcacatt tattaattca aataaaattt attatggatt      1740
     ctatcatctc tgctgcttct gttatagctg ctggtttagc gattggttta gctgctatcg      1800
     gccctggtat tggtcaaggt aatgctgctg gtcaagctgt agaaggtatt gctcgtcaac      1860
     ctgaaggaga aaacaaaatt cgtggtacgt tattattaag tttagctttc atggaagctt      1920
     taacaattta tggtctagta gtagcattag cattattatt cgctaacccg tttaatggtt      1980
     aatccgacta ttgttagtaa taacaatatg tagatagatc tagcgtaaaa ttatttacgc      2040
     taattctatc tattaaaaat ctttaattct atagtataac atatagattt tctatggtta      2100
     atctttcaat aataatttca agttctgaag tcaatggtcc cggcggatta ttcgacatta      2160
     atgcaacttt accgttagta gcgattcaat ttcttttatt aatggttctg cttaatgtta      2220
     ttttatatag cccattactg actattatag aagaacgtaa agaatatatt ttaaacaaac      2280
     ttgcaaaagc ctctgaaata ttatctcagg caaatgaatt gactgctcag tacgaacaag      2340
     aattaaatac ggtccgtaaa gaagcacaat tagaaattac aaactcacaa aaaattcata      2400
     aagaaatttt agagattgaa cttaatattt ctcaaaaata tattgataat ttattagaaa      2460
     atataacaga tgatctgctt gagaaaaaaa atacagctct taatagttta gatactattg      2520
     ttcagtcgtt atgtgttcaa attgaaaata gattatcaat ttaaattttt tgttagatgt      2580
     aattttcctt atttataact gaacagttta tataaaaact ttaaaacatg gaaaatttta      2640
     atcaaatttt tacattactt gccgaaaatg aaggtattgg tttaaacact gatattcttg      2700
     aaacaggtat aattaacatt gccgctttag ttggtatttt aatttatgcc ggccgagatt      2760
     ttctaggctc ttttctagag caacgtaaaa ccagtattgt acaaggtgtt caagatgctg      2820
     agggtagatt agaagaggct aatcgacgct taagcgaagc tcagaagcaa ttaagtcaag      2880
     cgcatatagt aattagcgag ataaaaaatg aaacaatatc agctaaaaaa gttttattag      2940
     aatctgatgc ttatcaagca aagaaagatt taacaactcg ttttagccga gctttagcta      3000
     cgtttcgttc aaaagaacgc caaatatttt tagaagttaa agaacaaatt atcctattag      3060
     ttttaaaacg tacagtagct cgcgctcagc aaacttttgg tccaaaagaa agagcaacag      3120
     cattaattac tgaaacaatt aataaattag aaggagattt gttatgagta taaatccttt      3180
     agcttcaaaa attgcagctc cttatgcacg tgctttgttt gacttctcag ttgatcaaaa      3240
     tcttatgcat caaattactg ctgattttca gaatttagaa gtctttttaa ataaaacacc      3300
     tgatttaaca gaatatttaa gtaatcctct tattagtgca aaatcgaaag aggaagtttt      3360
     aaataaaact ttaaaatcgc aaataaacaa agaaactttt aaatttttaa ttgttttagt      3420
     aaatcgaagt agaattaatt tgttagaacc cattattgct agttatctaa atctagttta      3480
     taatgcagct tctgttaaaa tgattgaagt ttctactgct tatgcattta cgaatttgca      3540
     aaaaaatact ttaattaaaa aattaaaaga attaacaaac gcaagagaaa ttcgcttagt      3600
     aattactgtt gattcaagtc ttattggcgg ttttttaatt aaaactaatt caaaagtact      3660
     tgattttacc attaaaaatc aattacaaaa attagctaaa catttagata gtgttttaga      3720
     aatttaaaaa taactaaatt cttttattaa ctttattatt ttaaaaataa tacaatgata      3780
     aatattcgtc cagacgaaat tagtagtatt atccgtgaac aaattgaaca atatgatcaa      3840
     gatgttaaag tagataatat tggtactgta ttacaagtag gtgatggtat tgctcgagtt      3900
     tatgggcttg atcaagtaat gagtggtgaa cttttagaat ttgaagataa aacaattggt      3960
     attgcactaa acttagagaa cgacaatgtt ggtgttgtat taatgggtaa tggtcgtcaa      4020
     attttagaag gtagtactgt aaaaacaaca ggtcaaattg ctcaaattcc aacaggtgag      4080
     gcgttcttag gccgtgttgt taatccgtta ggtgcaccta ttgatggaaa aggtgatatt      4140
     gcgaatacag aaactcgctt actagaagca atggcgccag gtattattag tcgtaaatca      4200
     gtttgtgaac cattacaaac aggtattaca tcaattgacg ctatgattcc aattggacga      4260
     ggtcaacgag aattaatcat tggtgatcgt caaacaggga aaacagctat tgcggttgat      4320
     acgattatta accaaaaaac tgaagatgtt gtttgtgttt atgttggtgt tggacaaaaa      4380
     gcttcaacag ttgcacaagt agtaaacgta cttgaagaaa aagaggcaat ggcatacaca      4440
     attattgttt gtgcaagtgc taatgatcct gcaacattac aatatattgc gccatatgcg      4500
     ggtgctgcat tagctgagta ctttatgtat aatggtaaag caactttagt tatttatgat      4560
     gatttaacta aacaagcaat ggcataccga caaatgtcgt tattacttcg tcgtccacca      4620
     ggacgtgagg cttaccctgg tgatgttttc tatttacact ctcgtttatt agaacgtgct      4680
     gcaaaactta gtgatgcttt aggtggtgga agtatgactg cattacctgt tattgagact      4740
     caagcaagtg acgtatcagc atatattcca actaacgtaa tttcgattac ggatggccaa      4800
     attttcttat caaatgattt atttaactca gggattcgtc cagctattaa tgttggtatt      4860
     tctgtttcac gtgtaggttc tgctgcacaa acaaaagcta tgaaacaagt agcgggtaaa      4920
     ttaaaattag aattggcaca atttgctgaa ttagaagctt tctctcaatt tgcctctgat      4980
     ttagatgaag caacacaaaa acaactagct cgtggtacac gattacgtga agtgttaaaa      5040
     caacctcaga attctccttt atcagtagca gagcaagtag ctttaatcta tacaggtatt      5100
     aatgggttct tagatgaatt agaagttgca tctgttaaaa agtactgtgc aagtttatta      5160
     tcattcttaa atacatcaaa taactcgtat attggaattg taagttcaac aaatcaattt      5220
     actgcagaag cagagactgc tctaaaagaa gctatctctg agtcaaaagc agtatttatg      5280
     aaataatcaa cttgtaattt gttactagtt ttttctaatt atagaaaata ttttaaaaag      5340
     attaaatttg tagaaaaata aatttaatct ttttaaaata ttttctatgt aaaatttct       5399
//


  
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