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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X59256; SV 1; linear; genomic DNA; STD; PLN; 1115 BP.
XX
AC   X59256;
XX
DT   28-JUN-1991 (Rel. 28, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Saponaria officinalis SAP3 gene for saporin
XX
KW   SAP3 gene; saporin.
XX
OS   Saponaria officinalis (common soapwort)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   Caryophyllales; Caryophyllaceae; Saponaria.
XX
RN   [1]
RP   1-1115
RA   Fordham-Skelton A.P.;
RT   ;
RL   Submitted (02-MAY-1991) to the EMBL/GenBank/DDBJ databases.
RL   A.P. Fordham-Skelton, University of Durham, Department of Biological
RL   Sciences, South Road, Durham, DH1 3LE, UK
XX
RN   [2]
RX   DOI; 10.1007/BF00267470
RX   PUBMED; 1719367.
RA   Fordham-Skelton A.P., Taylor P.N., Hartley M.R., Croy R.R.;
RT   "Characterisation of saporin genes: in vitro expression and ribosome
RT   inactivation";
RL   Mol. Gen. Genet. 229(3):460-466(1991).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1115
FT                   /organism="Saponaria officinalis"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:3572"
FT   CDS             <1..711
FT                   /codon_start=1
FT                   /gene="SAP3"
FT                   /product="saporin"
FT                   /db_xref="GOA:P27560"
FT                   /db_xref="InterPro:IPR001574"
FT                   /db_xref="InterPro:IPR016138"
FT                   /db_xref="InterPro:IPR016139"
FT                   /db_xref="InterPro:IPR017988"
FT                   /db_xref="InterPro:IPR017989"
FT                   /db_xref="UniProtKB/Swiss-Prot:P27560"
FT                   /protein_id="CAA41949.1"
FT                   /translation="DPNLKYGGTDIAVIGPPSRDKFLRLNFQSSRGTVSLGLKRENLYV
FT                   VAYLAMDNANVNRAYYFGTEITSAELTTLLPEATVANQKALEYTEDYQSIEKNAKITEG
FT                   DKTRKELGLGINLLSTLMDAVNKKARVVKNEARFLLIAIQMTAEAARFRYIQNLVTKNF
FT                   PNKFNSEDKVIQFQVNWSKISKAIYGDAKNGVFNKDYDFGFGKVRQVKDLQMGLLMYLG
FT                   TTPNNAADRYRAEL"
FT   polyA_signal    857..862
FT   polyA_signal    1029..1034
XX
SQ   Sequence 1115 BP; 351 A; 200 C; 240 G; 324 T; 0 other;
     gatccaaacc tgaaatacgg tggtaccgac atagccgtga tagggccacc ttctagagac        60
     aaatttctta gacttaattt ccaaagctct agaggaacag tttcacttgg cctaaaacgc       120
     gaaaacttgt atgtggtcgc gtatcttgca atggataacg cgaatgttaa tcgggcatat       180
     tacttcggaa ctgaaattac ttccgccgag ttaaccaccc ttctcccgga ggccacggtt       240
     gcaaatcaaa aagctttaga atacacagag gattaccaat cgatcgagaa gaatgccaag       300
     ataacagagg gagataaaac tagaaaagaa ctagggttgg ggatcaattt actttcgaca       360
     ttaatggatg ccgtgaacaa gaaggcacga gtggttaaaa atgaagctag gtttctgctt       420
     atcgccattc aaatgacggc tgaggcagcg cgatttaggt acatacaaaa cttggtaacc       480
     aagaactttc ccaataagtt caactcggaa gacaaggtga ttcagtttca ggttaactgg       540
     agtaagattt caaaggcaat atatggggat gccaaaaacg gcgtgtttaa taaagattat       600
     gatttcgggt tcgggaaagt gaggcaggtg aaggacctgc aaatggggct cctaatgtat       660
     ctaggcacga caccgaataa tgctgctgat cgatacaggg cagaactttg aaattcgatt       720
     tacgattctc attgattgat taattggggt gtttgattaa ttagccaagt attgaatctc       780
     taatgtattc ctatgtatgc cctcttattt caccattagt tgtttcaatc gtgtagtttc       840
     ttttcgtttc gtttcgaata aaggctaatt atattagatt tcggctcatg aaatgtcttc       900
     taatgaatca taaccagcgt taatctcccg taaattcacg ggttggctgt cagcatgctg       960
     aatattaaaa tgtaaaaaaa tgtacttttt tctacacagt taattttcta tgtttgaaat      1020
     tctcttgaaa taaaaaatcg cttagtagat agataaagat taaccggacc gtcttaaaaa      1080
     ttttggaggc cttgtgcagt ctttaaagcg agctc                                 1115
//
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