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EBI DbfetchID X57315; SV 1; linear; genomic DNA; STD; PRO; 4977 BP. XX AC X57315; XX DT 23-JUL-1991 (Rel. 28, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Haemophilus influenzae lic3 locus, containing galE and adk genes for DE UDP-galactose-4-epimerase and adenylate kinase XX KW adenylate kinase; adk gene; galE gene; lic3 gene; KW UDP-galactose 4-epimerase. XX OS Haemophilus influenzae OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. XX RN [1] RP 1-4977 RA Maskell D.J.; RT ; RL Submitted (22-JAN-1991) to the EMBL/GenBank/DDBJ databases. RL D.J. Maskell, Molecular Infectious Diseases Group, Institute of Molecular RL Medicine, John Radcliffe Hospital, Oxford OX3 9DU, U K XX RN [2] RP 1-4977 RX DOI; 10.1111/j.1365-2958.1991.tb01874.x RX PUBMED; 1956282. RA Maskell D.J., Szabo M.J., Butler P.D., Williams A.E., Moxon E.R.; RT "Molecular analysis of a complex locus from Haemophilus influenzae involved RT in phase-variable lipopolysaccharide biosynthesis"; RL Mol. Microbiol. 5(5):1013-1022(1991). XX DR RFAM; RF00059; TPP. XX FH Key Location/Qualifiers FH FT source 1..4977 FT /organism="Haemophilus influenzae" FT /strain="RM.7004" FT /mol_type="genomic DNA" FT /db_xref="taxon:727" FT CDS 480..1325 FT /transl_table=11 FT /note="ORF1" FT /db_xref="InterPro:IPR009251" FT /db_xref="UniProtKB/Swiss-Prot:P24324" FT /protein_id="CAA40567.1" FT /translation="MNGTICQSINQSINQSINQSINQSINQSINQSINQSKSVIIAGNG FT TSLKSIDYSLLPKDYDVFRCNQFYFEDHYFLGKKIKNVQKLLTQVDIGHYYLNKLPAFD FT AYLQYNELYENKRITSGVYMCAVATVMGYKDLYLTGIDFYQEKGNPYAFHHQKENIIKL FT LPSFSQNKSQSDIHSMEYDLNALYFLQKHYGVNIYCISPESPLCNYFPLSPLNNPITFI FT LEEKKNYTQDILIPPKFVYKKIGIYSKPRIYQNLIFRLIWDILRLPNDIKHALKSRKWD FT " FT repeat_region 498..585 FT /note="CAAT repeats" FT CDS 1498..2514 FT /transl_table=11 FT /gene="galE" FT /product="UDP-galactose-4-epimerase" FT /db_xref="GOA:P24325" FT /db_xref="HSSP:1EK6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P24325" FT /protein_id="CAA40568.1" FT /translation="MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVK FT QITGKEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGT FT LVLIQEMKKAGVWNFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDT FT AKAEPKFSMTILRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLAQLSVFGSDY FT DTHDGTGVRDYIHVVDLAVGHLKALQRHENDAGLHIYNLGTGHGYSVLDMVKAFEKANN FT ITIPYKLVERRSGDIATCYSDPSLAAKELGWVAERGLEKMMQDTWNWQKNNSKGYRD" FT CDS 2656..3933 FT /transl_table=11 FT /note="ORF3" FT /db_xref="GOA:P24326" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/Swiss-Prot:P24326" FT /protein_id="CAA40569.1" FT /translation="MSNSFSSQIFTRKMLICAFTGFNSGLPLFVLLQMLPVWLTDKHLS FT IELIGAVTGVMLPYGLKFLWAPLLDRYFPSFLGRRRSWMLLSQVALLILLYIISLFDPL FT TQLGTVANIALLIAFFSATQDIVLDAYRREILSDHELGLGNTIHINAYRIAGLIPGGLS FT LYLAAIYPWETVFLWTALCMLAGIFMTLFLAKEPKIDMQQTNQPFYQAFWIPLQEFFQR FT KGVIQAIGFLLFLFLYKFGDSFATTLQTKFIYDMGFSKEDIAIVVKSTSLWSSILSGLA FT GGMIMLKLGINRALWLFGLVQMVTIGGFIWLSAFGHFDVITSAELWKLGVVIAAEYIGV FT GLGTAAFVAFMARESNPLYTATQLALFTSLSALPSKVLGILSGYVVGAVGYYQYFWFCL FT FLAIPGMLCLFWVAPWKQKNNKTSSV" FT CDS 4018..4662 FT /transl_table=11 FT /gene="adk" FT /product="adenylate kinase" FT /db_xref="GOA:P24323" FT /db_xref="HSSP:1E4Y" FT /db_xref="InterPro:IPR007862" FT /db_xref="UniProtKB/Swiss-Prot:P24323" FT /protein_id="CAA40570.1" FT /translation="MKIILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKAGTEL FT GKQAKALMDEGKLVPDELTVALVKDRIAQADCANGFLLDGFPRTIPQADALKDSGVKID FT FVLEFDVPDEVIVERMSGRRVHQASGRSYHIVYNPPKVEGKDDVTGEDLIIRADDKPET FT VLDRLAVYHKQTSPLIDYYQAEAKAGNTQYFRLDGTQKVEEVSQELDKILG" XX SQ Sequence 4977 BP; 1588 A; 812 C; 936 G; 1641 T; 0 other; aagcttaccc attcgttcgg caacagggtt aaattaagat gctcaaataa cgtttgccca 60 ttaaaggcaa gactcaaatc ttgaatacgc accattgctc gcctcaatga ttaaagggaa 120 tgcgtaataa aaaagaaagg ataagaaatg gaatgaaaag aaaatggatt ttttggcata 180 ttagtttcct acgtcagtgc taactgtttc aggttcacgg gtatcatctc accgtttcgg 240 caccccgact aaaaattgtt ggtaagttta cgcttgtttg gtagaaaaaa caagcgatta 300 ggtttctatc cgaatggaac aagaaaagca tttttaaatt tttcttgcta agatacaacg 360 gagatagtac aactgatatt agataataat tttaggaagg tataatcaac gtttagtaaa 420 aagttctata aatctatata atgtttatta ttttttaggg ataacttcta ttttattcaa 480 tgaacggtac aatatgtcaa tcaatcaatc aatcaatcaa tcaatcaatc aatcaatcaa 540 tcaatcaatc aatcaatcaa tcaatcaatc aatcaatcaa tcaatcaaag tctgtcatta 600 ttgcaggtaa tggaacaagt ttaaaatcaa ttgactatag tttattacct aaagattatg 660 atgttttccg ttgcaatcaa ttttattttg aagatcatta ttttcttggc aagaaaatta 720 aaaatgtaca aaaattacta acacaagttg atattggaca ttattattta aacaagctac 780 ccgcctttga tgcctattta caatataacg aattatatga aaataagaga attacatcag 840 gcgtttatat gtgtgcagtg gcaactgtaa tgggttataa agatctttat ttaacaggta 900 ttgattttta tcaagaaaaa gggaatcctt acgcatttca tcatcaaaaa gaaaatatta 960 ttaaattatt accttctttt tcacaaaata aaagtcaaag cgatatccat tctatggaat 1020 atgatttaaa tgcactttat tttttacaaa aacattatgg agtaaatatt tattgcattt 1080 cgccagaaag tcctctatgt aattattttc ctttatcacc actgaataac ccaattactt 1140 ttattctcga agaaaagaaa aattacacac aagatatttt aattccgccg aagtttgtat 1200 ataaaaaaat tggtatatat tccaaaccaa gaatttacca aaatctgatt tttcggttga 1260 tctgggatat attacgttta cctaatgata taaaacacgc cttaaaatca agaaaatggg 1320 attagataac cttatatcac acaactaatg gacatagccc taaatatgag aggttatctc 1380 actcgctaca acaatacttt ttagcaacag gttttttatt ttattgaaaa tcaccattct 1440 taccacacaa aatagtgata taatttttta gtctcaataa ttaacaagga aatcattatg 1500 gccattttag tgacgggtgg cgctggttat atcggttctc acacagttgt agaattatta 1560 aatgttggca aagaggtggt agtattagat aatctttgca attcatcgcc aaaatccctt 1620 gagcgtgtaa aacaaattac aggcaaagaa gcaaagtttt atgaaggcga tattttagat 1680 cgtgctttgt tacaaaaaat ttttgcagaa aatgagatta actcggttat tcactttgca 1740 gggttaaaag ccgtagggga aagtgttcaa aagccgacag aatattacat gaacaatgtc 1800 gctggcaccc ttgtattaat tcaagaaatg aaaaaagcgg gtgtttggaa ctttgtattc 1860 agctcatctg caacggttta cggcgatcca aaaattattc caattacaga ggattgtgaa 1920 gtcggcggta caaccaaccc ttatggtaca tctaaatata tggttgagca gattttacgc 1980 gatacagcaa aagcggaacc aaaatttagc atgactatct tgcgttattt taatccagtt 2040 ggggcgcatg aaagtggctt gattggtgaa gatccaaatg gtattccaaa taatttatta 2100 ccttatatta gccaagttgc tatcggtaaa ttagcacaac tttctgtatt tggtagtgat 2160 tacgacactc atgatggaac aggtgtgcgt gattatattc atgtagtgga tttagctgtg 2220 gggcatttaa aagcgcttca acgtcatgaa aatgacgctg gcttacatat ttataatctt 2280 ggtacgggcc atggttattc cgtattagat atggtaaaag cctttgaaaa agccaacaat 2340 attacaattc catataaact tgtagaacgc cgctctggcg atattgccac ttgctattct 2400 gatcctagtt tagctgcaaa agagcttggt tgggtggcag aacgtggtct tgaaaaaatg 2460 atgcaagaca cgtggaactg gcagaaaaat aattcaaaag ggtatagaga ttaatattct 2520 ctaatatttg tttttctttt ttaggaagaa gaatgctaaa cattggggga atgattaaaa 2580 atcccctaat ttttacaaaa atcctttaat tgaaaggcga aatttctaaa atacaaccaa 2640 aattaaccgc actttatgtc aaattccttt tcttcccaaa tttttacgcg caagatgtta 2700 atttgcgcct tcacaggttt taattctggt ttgccattat ttgtgttatt gcaaatgttg 2760 cctgtttggc tgacagataa acatctttca attgagctta ttggcgcagt aacgggtgtg 2820 atgttgcctt atggcttgaa atttttgtgg gcaccattat tggatcgtta tttcccgagt 2880 tttttagggc gtcgtcgtag ctggatgctg ctttcacaag tggcattatt gattttactt 2940 tacatcatta gcctgtttga tccgctcaca caactgggta cagtagcaaa tattgcgttg 3000 cttatcgcct ttttttcagc tacacaagat atcgtgttgg atgcgtatcg tcgtgaaatt 3060 ttgagtgatc atgaattagg tttaggaaac actattcata ttaatgctta tcgaattgcg 3120 ggattaattc ctggtggatt atcgctatat ttggcggcga tttatccttg ggaaaccgtc 3180 tttttgtgga ccgcactttg tatgttagca ggcatcttca tgacactatt tttagcaaaa 3240 gagccaaaaa tagacatgca gcaaactaat cagccgttct atcaagcatt ttggattcca 3300 ttacaagaat ttttccagcg taagggcgtc attcaggcta tcggtttttt actatttttg 3360 tttttgtata agttcgggga ttcttttgcc acaacgttac aaaccaaatt tatttatgac 3420 atgggattta gcaaagagga tattgctatt gttgtaaaaa gtacttcact ttggtcaagc 3480 attttatctg ggcttgctgg tggtatgata atgctaaaac tgggtattaa ccgtgcattg 3540 tggctatttg ggcttgtaca aatggtaaca attggtgggt ttatttggtt gtctgctttc 3600 ggtcattttg atgttattac atctgccgag ttatggaaac taggtgttgt gattgcagca 3660 gaatatatcg gcgttggact tggtaccgca gcttttgtgg cttttatggc gcgtgagagt 3720 aatcctcttt atactgcaac acagcttgca ctttttacaa gcctttcagc tttgccaagt 3780 aaagttttag gtatactttc tggttatgtt gtgggagcag tggggtatta tcagtatttt 3840 tggttttgtt tatttttagc gattcccggc atgctttgtt tattttgggt agcaccttgg 3900 aagcaaaaaa ataataagac cagctcagta taaaagtgcg gtaaaaatta taaaaaattt 3960 gaccgcacta tgctttatca gtatcttaat cacgttttgt attaatggag attttttatg 4020 aaaattattc ttttaggtgc accgggtgca ggtaaaggca ctcaagcaca atttattatg 4080 aacaaatttg gtatcccgca aatttcaact ggtgatatgt tccgtgctgc aatcaaagcg 4140 gggactgaac ttggcaaaca agctaaagca ttaatggatg aaggtaaatt agtaccagat 4200 gaattaaccg ttgctcttgt aaaagatcgt attgctcaag ctgactgtgc aaatggtttc 4260 ttgttagatg gtttccctcg tactattcca caagcggatg cactgaaaga ttcaggtgtt 4320 aaaattgact ttgttttaga atttgatgtg ccagacgaag tgattgttga acgtatgagt 4380 ggccgtcgcg tacaccaagc gtctggtcgt tcttaccaca tcgtttataa tccaccaaaa 4440 gtggaaggta aagatgatgt aacaggcgaa gatttaatta ttcgtgcaga cgataaacca 4500 gaaactgtat tagatcgttt agccgtatat cataaacaaa ctagcccatt aattgattat 4560 taccaagcag aagcgaaagc ggggaatact caatatttcc gtttagacgg tacacaaaaa 4620 gtagaagaag ttagccaaga gttagataaa atcttaggct aaaaataatc taaaaattaa 4680 ccgcacttta gaaaatataa ttaatctgca ccttaaaggc tgaataaatc agcgaattaa 4740 agtgcagatt tttttataaa ctacccaaat ttataatagg ctgaaaaaag tgcggtattt 4800 tttcagccta tttttagaaa atcacttctc gtctttgaag cctgactcaa cgccactcat 4860 atcaggtaat tggtgtgcaa tacctttgtg acagtcgata caagttttac cttcagtttt 4920 cattttttgg tgcatacgtg ccgccacaga acgttgatca ttgaagttca tacgatc 4977 // |
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