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EBI DbfetchID X56678; SV 1; linear; genomic DNA; STD; PRO; 5798 BP. XX AC X56678; S75643; XX DT 20-SEP-1991 (Rel. 29, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 20) XX DE B.subtilis dciA operon XX KW dciA operon; dciAA gene; dciAB gene; dciAC gene; dciAD gene; dciAE gene. XX OS Bacillus subtilis OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-5798 RA Sonenshein A.L.; RT ; RL Submitted (19-NOV-1990) to the EMBL/GenBank/DDBJ databases. RL A.L. Sonenshein, TUFTS UNIVERSITY HEALTH SCIENCES, CAMPUS, DEPT OF RL MICROBIOLOGY & MOL. BIOLOGY, 136 HARRISON AVE, BOSTON MA 02111, USA XX RN [4] RP 1-5798 RX DOI; 10.1111/j.1365-2958.1991.tb00814.x RX PUBMED; 1766370. RA Mathiopoulos C., Mueller J.P., Slack F.J., Murphy C.G., Patankar S., RA Bukusoglu G., Sonenshein A.L.; RT "A Bacillus subtilis dipeptide transport system expressed early during RT sporulation"; RL Mol. Microbiol. 5(8):1903-1913(1991). XX RN [5] RX DOI; 10.1111/j.1365-2958.1991.tb00815.x RX PUBMED; 1766371. RA Slack F.J., Mueller J.P., Strauch M.A., Mathiopoulos C., Sonenshein A.L.; RT "Transcriptional regulation of a Bacillus subtilis dipeptide transport RT operon"; RL Mol. Microbiol. 5(8):1915-1925(1991). XX FH Key Location/Qualifiers FH FT source 1..5798 FT /organism="Bacillus subtilis" FT /strain="168" FT /mol_type="genomic DNA" FT /clone_lib="pCM103" FT /clone="pCM103" FT /db_xref="taxon:1423" FT CDS <1..81 FT /codon_start=1 FT /transl_table=11 FT /note="orfX" FT /db_xref="GOA:Q00777" FT /db_xref="InterPro:IPR000304" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q00777" FT /protein_id="CAA40001.1" FT /translation="PDVFDEVFERTLRKYELLTEQVGKQT" FT terminator 80..99 FT -10_signal 140..145 FT -35_signal 163..168 FT RBS 196..203 FT CDS 210..1034 FT /transl_table=11 FT /gene="dciAA" FT /db_xref="GOA:P26902" FT /db_xref="InterPro:IPR007035" FT /db_xref="PDB:1HI9" FT /db_xref="UniProtKB/Swiss-Prot:P26902" FT /protein_id="CAA40002.1" FT /translation="MKLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAE FT AFNSGCTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFRGALFLGYH FT ARASTPGVMSHSMIFGVRHFYINDRPVGELGLNAYVAGYYDVPVLMVAGDDRAAKEAEE FT LIPNVTTAAVKQTISRSAVKCLSPAKAGRLLTEKTPFALQNKDKVKPLTPPDRPVLSIE FT FANYGQAEWANLMPGTEIKTGTTTVQFQAKDMLEAYQAMLVMTELAMRTSFC" FT conflict 803..804 FT /replace="cg" FT /citation=[4] FT RBS 1033..1041 FT CDS 1051..1977 FT /transl_table=11 FT /gene="dciAB" FT /db_xref="GOA:P26903" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/Swiss-Prot:P26903" FT /protein_id="CAA40003.1" FT /translation="MARYMIKRFWAMAATILVITTLTFVLMKVIPGSPFNEERGTNEAV FT QKNLEAYYHLDDPLIFQYIFYLKSIITFDFGPSIKKPSDSVNDMLERGFPVSFELGMTA FT IVIAVISGLVLGVIAALRRNGFLDYAAMSLAVLGISIPNFILATLLIQQFAVNLKLFPA FT ATWTSPIHMVLPTAALAVGPMAIIARLTRSSMVEVLTQDYIRTAKAKGLSPFKIIVKHA FT LRNALMPVITVLGTLVASILTGSFVIEKIFAIPGMGKYFVESINQRDYPVIMGTTVFYS FT VILIIMLFLVDLAYGLLDPRIKLHKKG" FT RBS 1967..1977 FT CDS 1983..2945 FT /transl_table=11 FT /gene="dciAC" FT /db_xref="GOA:P26904" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/Swiss-Prot:P26904" FT /protein_id="CAA40004.1" FT /translation="MNLPVQTDERQPEQHNQVPDEWFVLNQEKNREADSVKRPSLSYTQ FT DAWRRLKKNKLAMAGLFILLFLFVMAVIGPFLSPHSVVRQSLTEQNLPPSADHWFGTDE FT LGRDVFTRTWYGARISLFVGVMAALIDFLIGVIYGGVAGYKGGRIDSIMMRIIEVLYGL FT PYLLVVILLMVLMGPGLGTIIVALTVTGWVGMARIVRGQVLQIKNYEYVLASKTFGAKT FT FRIIRKNLLRNTMGAIIVQMTLTVPAAIFAESFLSFLGLGIQAPFASWGVMANDGLPTI FT LSGHWWRLFFPAFFISSTMYAFNVLGDGLQDALDPKLRR" FT conflict 2677..2678 FT /replace="cg" FT /citation=[4] FT conflict 2874..2875 FT /replace="ct" FT /citation=[4] FT RBS 2937..2943 FT conflict 2944..2945 FT /replace="ag" FT /citation=[4] FT CDS 2950..3957 FT /transl_table=11 FT /gene="dciAD" FT /db_xref="GOA:P26905" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010066" FT /db_xref="InterPro:IPR013563" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/Swiss-Prot:P26905" FT /protein_id="CAA40005.1" FT /translation="MEKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYKGETFAIVGESGC FT GKSVTSQSIMGLLPPYSAKVTDGRILFKNKDLCRLSDKEMRGIRGADISMIFQDPMTAL FT NPTLTVGDQLGEALLRHKKMSKKAARKEVLSMLSLVGIPDPGERLKQYPHQFSGGMRQR FT IVIAMALICEPDILIADEPTTALDVTIQAQILELFKEIQRKTDVSVILITHDLGVVAQV FT ADRVAVMYAGKMAEIGTRKDIFYQPQHPYTKGLLGSVPRLDLNGAELTPIDGTPPDLFS FT PPPGCPFAARCPNRMVVCDRVYPGQTIRSDSHTVNCWLQDQRAEHAVLSGDAKD" FT RBS 3964..3971 FT CDS 3978..5609 FT /transl_table=11 FT /gene="dciAE" FT /db_xref="GOA:P26906" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/Swiss-Prot:P26906" FT /protein_id="CAA40006.1" FT /translation="MKRVKKLWGMGLALGLSFALMGCTANEQAGKEGSHDKAKTSGEKV FT LYVNNENEPTSFDPPIGFNNVSWQPLNNIMEGLTRLGKDHEPEPAMAEKWSVSKDNKTY FT TFTIRENAKWTNGDPVTAGDFEYAWKRMLDPKKGASSAFLGYFIEGGEAYNSGKGKKDD FT VKVTAKDDRTLEVTLEAPQKYFLSVVSNPAYFPVNEKVDKDNPKWFAESDTFVGNGPFK FT LTEWKHDDSITMEKSDTYWDKDTVKLDKVKWAMVSDRNTDYQMFQSGELDTAYVPAELS FT DQLLDQDNVNIVDQAGLYFYRFNVNMEPFQNENIRKAFAMAVDQEEIVKYVTKNNEKPA FT HAFVSPGFTQPDGKDFREAGGDLIKPNESKAKQLLEKGMKEENYNKLPAITLTYSTKPE FT HKKIAEAIQQKLKNSLGVDVKLANMEWNVFLEDQKALKFQFSQSSFLPDYADPISFLEA FT FQTGNSMNRTGWANKEYDQLIKQAKNEADEKTRFSLMHQAEELLINEAPIIPVYFYNQV FT HLQNEQVKGIVRHPVGYIDLKWADKN" FT terminator 5625..5658 XX SQ Sequence 5798 BP; 1596 A; 1237 C; 1505 G; 1460 T; 0 other; ccggacgttt ttgatgaggt atttgaaaga accctgagaa aatatgaact gcttacagaa 60 caggttggta aacaaacatg aatccttgaa agaggattct ttttttatca ctgaatgatt 120 gagatttttc ccagttatat tgcatttttc ctcttttttt aatataattt gttagaatat 180 tcataattta gtaaaaaagg aggagcgtta tgaaattgta catgtcagta gatatggaag 240 gtatttcggg tcttccggac gatacctttg tggattccgg caagcggaat tatgaacgcg 300 gacggcttat catgactgaa gaagcaaact actgtattgc tgaagcgttt aacagcgggt 360 gtaccgaggt gctggtcaat gacagtcatt cgaagatgaa taatctgatg gttgaaaagc 420 ttcaccctga agcagacttg atttctggtg acgtcaaacc attttcaatg gtggagggac 480 tggatgatac gtttagaggc gctttgtttc tcggttatca tgcgagagcc tcgactcctg 540 gtgtcatgtc acacagcatg attttcggcg tccgtcattt ttacataaac gatcggcctg 600 tcggtgagct tggattaaat gcatacgttg ccggttatta tgatgtcccg gtattaatgg 660 tagccgggga tgaccgggcg gcgaaggaag cagaagagct tatcccgaac gtgacgacag 720 ccgcagtcaa acaaaccatt tcaagatccg cagtgaagtg cttgtcgcct gcgaaagccg 780 gacggctgtt gacagaaaaa acgccatttg ccctgcaaaa caaggacaaa gtcaagccgc 840 tcacaccgcc tgacaggcca gttctgagca ttgaattcgc caattatggc caagcagaat 900 gggcgaatct gatgccggga acggaaatca agacgggaac tacaaccgtt caatttcagg 960 cgaaggacat gcttgaagcc tatcaggcga tgcttgtcat gactgagctt gcgatgcgga 1020 catcattctg ctaaaggggt gttttaggct ttggcgcgat acatgataaa gcgtttttgg 1080 gcaatggcag ctacgatttt ggtgattacc accctgactt ttgttctcat gaaggtcatt 1140 cccggatctc cttttaacga ggagagaggc acaaatgaag ccgttcaaaa aaatctcgaa 1200 gcctactatc acttagacga tcctctcatt ttccaataca ttttctactt aaaatccatc 1260 attacattcg atttcggacc ttcaattaaa aaaccgtcgg acagcgtaaa tgatatgctg 1320 gaacgcggat ttcccgtttc ctttgagctt gggatgacag cgattgtcat tgctgtgatt 1380 tctgggctgg tgctgggcgt aatcgctgca ctccgccgca atggcttttt ggactacgcc 1440 gcgatgagtc ttgcagtact cggcatctcc atcccgaatt ttattctggc aacattgctc 1500 attcagcaat ttgctgtcaa tctcaaacta tttcccgctg cgacatggac gagcccgatt 1560 catatggtgc ttccgaccgc agcgcttgct gtagggccaa tggcgatcat tgccaggctg 1620 acacggtcga gcatggtcga agttctgaca caggattata tccgcacagc aaaagcaaaa 1680 gggctttctc cgttcaaaat tatcgtaaaa cacgcactca gaaatgcact catgcccgtc 1740 attaccgtcc tgggcacact cgtcgccagc atcttaacag gaagctttgt cattgaaaaa 1800 atctttgcca ttccgggaat gggaaaatat tttgttgaaa gcattaatca gcgggactac 1860 cccgtgatta tgggaacgac cgttttttac agcgtcattc tgattatcat gctgtttttg 1920 gtcgatttgg cctacggtct cttagacccg cgcattaaac tgcataagaa agggtgaagc 1980 gtgtgaatct ccctgtacaa acggatgaac gccagccaga acagcacaat caggtgcctg 2040 atgagtggtt tgtcttgaat caggaaaaaa atcgggaagc cgattcggtc aagcggccga 2100 gtttgtcata cacgcaggat gcctggagga ggctgaaaaa aaataaatta gcgatggccg 2160 gactctttat tcttttattt ctttttgtca tggcagttat cgggcccttt ttatcgcccc 2220 atagtgtcgt acgccaatcg ctgacagaac aaaatcttcc gccctcagcc gatcattggt 2280 tcggcaccga tgaactcggc cgggatgtgt ttacccgaac atggtatggc gcgagaatct 2340 cgttgtttgt cggcgtgatg gcagcactga ttgatttttt gatcggtgtc atttacggag 2400 gcgttgccgg ctataaaggc ggcaggattg acagcattat gatgcggatt atcgaagtgc 2460 tgtacggact gccgtatctg cttgttgtca ttttgctgat ggtgctcatg ggaccgggac 2520 tgggcacgat tattgtggcg ctgactgtga ccgggtgggt cggcatggcg agaattgtaa 2580 gaggccaggt gcttcagatt aaaaattatg aatatgtact cgcctcgaaa acctttggcg 2640 cgaaaacctt tcgcatcatc cggaagaatt tgctgcgcaa tactatggga gcgatcatcg 2700 tacaaatgac attaaccgta cctgccgcca tattcgcaga atcattttta agctttctcg 2760 gcctgggcat acaggctccg tttgcaagtt ggggcgtgat ggcgaatgac ggcctgccta 2820 cgattttatc tgggcattgg tggcgcctgt tttttccggc ctttttcata tcttcgacga 2880 tgtacgcgtt taatgtgctg ggggacggat tgcaggatgc gcttgaccct aagctgagga 2940 ggtgactgta tggaaaaagt tctgtcagtc caaaatctgc acgtgtcttt tacgacttac 3000 ggcgggacgg ttcaggcggt cagaggggtg agctttgatt tgtataaagg agaaaccttt 3060 gcgatcgtcg gcgaatccgg ctgcggcaaa agcgttacct cccaaagcat catgggcctg 3120 cttccgcctt attcggcgaa ggtgacagac ggcaggattc tatttaaaaa caaagacctt 3180 tgccgtctct ctgacaaaga aatgagaggt ataaggggag ccgacatttc tatgattttt 3240 caagacccga tgacggcgtt aaaccctacg ctgactgtcg gcgaccagct gggggaagcg 3300 ctattgcgcc acaaaaaaat gagcaaaaaa gcggcacgga aagaggtgct ttccatgctg 3360 tcattggttg gtattccaga tcccggagag cgcctaaagc aatatcccca ccaattcagc 3420 ggcggtatga gacagcggat tgtcattgcg atggcgctga tttgcgagcc tgatatctta 3480 attgcggatg aaccgaccac cgccctggat gtaaccattc aggcacagat tttagagctg 3540 tttaaagaga ttcagagaaa aacggatgtg tctgtcattc tgattacgca cgatttaggg 3600 gttgttgccc aggtagctga cagagtcgca gtcatgtatg ccgggaaaat ggcggaaatc 3660 ggcacaagaa aagatatttt ttatcagccg cagcacccat atacaaaagg cctgctgggc 3720 tctgtcccgc ggctggattt aaatggcgct gagctgaccc cgattgacgg aacgccgccg 3780 gatttatttt cgcctccgcc gggctgcccg tttgccgccc gctgtccgaa caggatggtt 3840 gtgtgtgaca gggtgtaccc gggccagacg atcagatctg actcgcacac cgtcaactgc 3900 tggctgcagg atcaacgagc agagcatgcg gtgctgtcag gagatgcgaa ggattgaaca 3960 tgaaaagggg gaagaggatg aaacgagtga aaaagctatg gggcatgggt cttgcattag 4020 gactttcgtt tgcgctgatg gggtgcacag caaatgaaca ggccggaaaa gaaggcagtc 4080 atgataaggc aaaaaccagc ggagaaaagg tgctgtatgt aaataatgaa aatgaaccga 4140 cttcattcga tccgccgatc ggctttaata atgtgtcatg gcagccgtta aataacatca 4200 tggaggggct gacgcgtctt ggcaaagatc atgagcccga gccggcaatg gcggagaaat 4260 ggtctgtttc gaaagataat aaaacttaca catttacgat tcgggaaaat gcgaaatgga 4320 caaacggaga tcctgtaaca gccggagact tcgaatacgc gtggaagcgg atgcttgatc 4380 cgaaaaaagg cgcttcatcg gcattcctag gttattttat tgaaggcggc gaagcatata 4440 acagcgggaa agggaaaaaa gacgatgtga aggtgacggc aaaggatgat cgaacccttg 4500 aagttacact ggaagcaccg caaaaatatt tcctgagcgt tgtgtccaat cccgcgtatt 4560 tcccggtaaa tgaaaaggtc gataaagaca atccaaagtg gtttgctgag tcggatacat 4620 ttgtcggaaa cggcccgttt aagctgacgg aatggaagca tgatgacagc atcacaatgg 4680 agaaaagcga cacgtattgg gataaggata cagtgaagct tgataaggtg aaatgggcga 4740 tggtcagtga cagaaataca gattaccaga tgtttcaatc aggggaactt gataccgctt 4800 atgtccctgc tgagctgagt gatcagctgc ttgatcagga taacgtcaat attgttgacc 4860 aggcgggtct ctatttctat cgatttaatg tcaacatgga gccgttccaa aatgaaaaca 4920 tcagaaaagc ctttgcgatg gctgtggatc aagaggaaat tgtaaagtac gtcacgaaaa 4980 ataatgaaaa accggcgcac gcctttgtat cgcctgggtt tacgcagcct gacggcaaag 5040 atttccgtga agcaggcgga gacctgatca agcctaacga aagcaaagcg aagcagctgc 5100 tcgaaaaggg catgaaggaa gaaaactata ataagcttcc tgcgatcacg cttacttaca 5160 gcacaaagcc ggagcataaa aagattgccg aagctattca gcaaaaattg aaaaatagcc 5220 ttggagtcga tgtgaagctg gccaatatgg aatggaacgt atttttagag gatcaaaaag 5280 cgctgaaatt ccaattctct caaagctcat ttttgcctga ttatgcagac cctatcagtt 5340 ttctggaagc ctttcaaacg ggaaattcga tgaaccgcac aggctgggcc aataaagaat 5400 acgatcagct gatcaaacag gcgaaaaacg aagccgatga aaaaacacgg ttctctctta 5460 tgcatcaagc tgaagagctg ctcatcaatg aagcgccgat cattccggtt tatttttata 5520 atcaggttca cctgcaaaat gaacaagtaa aaggaattgt ccgtcaccct gtcggctata 5580 tcgatttaaa atgggcagat aaaaactgat ggaggcgatt gaggaaatac tgcttcttta 5640 tgcgaaggag cggtattttt tctctttctt gcacgtatac gtagggtgca gagcaaatga 5700 aaggagtgtt ttcgttgaat tacaagccga aagcgttgaa caagggtgat acagtcggag 5760 tgatcgcgcc cgcaagtccg ccggatccaa aaaagctt 5798 // |
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