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EBI DbfetchID X55137; SV 1; linear; genomic DNA; STD; PRO; 2938 BP. XX AC X55137; XX DT 27-AUG-1991 (Rel. 29, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE H. giganteus type II restriction-modification system HgiBI XX KW methyltransferase; restriction endonuclease. XX OS Herpetosiphon aurantiacus OC Bacteria; Chloroflexi; Herpetosiphonales; Herpetosiphonaceae; OC Herpetosiphon. XX RN [1] RA Kroeger M.; RT ; RL Submitted (27-NOV-1990) to the EMBL/GenBank/DDBJ databases. RL M. Kroeger, INST MIKRO- UND MOLEKULARBIOLOGIE, FRANKFURTER STRASSE 107, RL D-W-6300 GIESSEN, FRG XX RN [2] RP 1-2938 RX DOI; 10.1093/nar/19.12.3207 RX PUBMED; 2062638. RA Duesterhoeft A., Erdmann D., Kroeger M.; RT "Isolation and genetic structure of the AvaII isoschizomeric RT restriction-modification system HgiBI from Herpetosiphon giganteus Hpg5: RT M.HgiBI reveals high homology to M.BanI."; RL Nucleic Acids Res. 19(12):3207-3211(1991). XX CC See also X55137-X55143. XX FH Key Location/Qualifiers FH FT source 1..2938 FT /organism="Herpetosiphon aurantiacus" FT /strain="Hpg5" FT /mol_type="genomic DNA" FT /db_xref="taxon:65" FT CDS <1..250 FT /codon_start=2 FT /transl_table=11 FT /gene="orf11" FT /db_xref="GOA:P25277" FT /db_xref="UniProtKB/Swiss-Prot:P25277" FT /protein_id="CAA38926.1" FT /translation="SMPPQVMVEINGMLNDGCTAFHEAKQVVEGNTIKIEVTTIRPKDA FT MCTQEISPFSTTIQVDAQLQPGEYTILVNDVAEALKL" FT CDS 423..1736 FT /transl_table=11 FT /gene="hgiBIM" FT /product="methyltransferase" FT /db_xref="GOA:P25262" FT /db_xref="HSSP:6MHT" FT /db_xref="InterPro:IPR018117" FT /db_xref="UniProtKB/Swiss-Prot:P25262" FT /protein_id="CAA38927.1" FT /translation="MQQFRFIDLFAGIGGFRLGLEAVGGVCVASAEIDQQAIKVYRQNW FT PTDGVDHNLGDITAIQQLPAHDVLVGGVPCQPWSIAGKNQAFDDPRGQLWADVIRLVQI FT NQPKAFIFENVKGLVDPRNRLCLEIILDSFKDLGYSVFYKLLNSFDFGVAQNRDRVFIV FT GIQQKLDLNGFSFPEYTESEQRLYHILDNLEVPETKLESIPIQRNLFGERIDVGYNKLT FT PRGAFNDFFILNDIRNGPTSIHSWEIYPTTEREKQICMIIMRNRRNSRYGDCDGNPMSY FT QDIAELVAGLAEKELQTLVEKRILRQYPDGKYEFFNRRLSGGIDGTYRIFLPNARFFGT FT LTARGMHDEIAEISVSGANAEEYKHNFIQQVLIPKRYRKITVSEAARLQGFPGSFQFHS FT NQSANFRLIGNSVAPPVIVALGKALQCVKLFEQELCEV" FT CDS 1740..2564 FT /transl_table=11 FT /gene="hgiBIR" FT /product="restriction endonuclease" FT /db_xref="GOA:P25257" FT /db_xref="InterPro:IPR019045" FT /db_xref="UniProtKB/Swiss-Prot:P25257" FT /protein_id="CAA38928.1" FT /translation="MAINPITRNKIKDYLNSFIQQQLSVYSQRSLREFQDVDSYPSSLS FT KDGDLKPFHASLIPASIMRLNRFERSLSTGLGSTFEECTRLIALDHHAVALRNYDIQAA FT LDQAQWAAIDQLISTIDRGLKHQTPSLNQMLEQIQSIPLTGILETHIVRADLYIQRHDG FT SELFFEIKSPKPSKGQCLEVMQRLLRIYTIKQQSAVPVKAFYAMAYNPWGISRASYRSS FT ITKKYTDFSNAVVIGQEFWSLIGEPSTYTELLEIYHEVGLAKSAEITQKLLQ" XX SQ Sequence 2938 BP; 863 A; 548 C; 627 G; 900 T; 0 other; atcgatgccg ccccaagtga tggttgaaat taacggcatg ctcaacgatg gctgcaccgc 60 attccacgaa gccaagcaag tggtcgaagg caacacgatt aaaattgaag taacgacgat 120 tcggccaaaa gatgctatgt gtacccaaga aatctcacca tttagcacta cgattcaagt 180 tgatgctcag ctccaaccag gtgaatatac gattctggtt aacgatgttg ctgaagcgct 240 taaattgtaa atttgcagca agtttttgat ttcagcgggg agcttcggct ctccgttgat 300 tgtttaatct gaaatgttaa ggtcgcacat aatttgatca atcttcatta acctgctcac 360 tttgacagat tgtcaagctg ttctaaaata tcgaacagac attaaaacca tggaagataa 420 ttatgcaaca atttcgcttt atagatttat ttgcagggat tggtgggttt cggttaggcc 480 ttgaggcagt tggaggtgtt tgtgttgcct cagctgaaat tgatcaacaa gcgattaagg 540 tttatcggca aaattggcct accgatggag tagatcataa tttaggtgat attacagcaa 600 ttcaacaatt gcccgcccat gatgtactcg ttggtggcgt accatgccaa ccttggtcga 660 ttgcaggcaa gaatcaagcg tttgatgatc cacgtgggca attgtgggct gatgttattc 720 ggctggttca aattaatcag cctaaagcct ttatttttga aaatgtcaaa ggtttagttg 780 atccacgaaa tcgtttatgt ttagaaatca ttcttgatag ttttaaagat ttaggctata 840 gcgtttttta taagctatta aattcttttg attttggggt tgcccaaaat cgtgatcgcg 900 tttttattgt tggaatacaa caaaaacttg acctgaatgg cttttcattt ccagaatata 960 ctgaatctga acaacggctt taccatattt tagataatct tgaagtacca gaaactaagc 1020 ttgaatcaat tccaattcag cgcaatttat ttggtgagcg aattgatgtt ggctataata 1080 aattaactcc tcgtggtgca tttaatgatt tttttattct taatgatatt cgcaatggcc 1140 caacaagtat tcatagctgg gaaatatatc ctacaactga acgtgaaaag cagatttgta 1200 tgattattat gcgtaatcga cgtaattctc gttatggcga ctgcgatggc aacccgatga 1260 gctatcagga tatagctgaa ttggttgctg gtttagcaga aaaagaatta caaaccttag 1320 tagaaaaacg aattttacgt caatatcctg atggtaagta tgaatttttt aatcggcgtt 1380 tatctggtgg gatcgacgga acataccgaa tttttttacc aaatgcgcgc ttttttggta 1440 cattaaccgc acgtggaatg cacgatgaaa ttgctgaaat tagtgttagt ggtgctaatg 1500 ctgaggaata taaacataat tttattcagc aagtgttaat cccaaaacgc tatcggaaaa 1560 ttaccgtaag cgaagctgct cgtttacaag gctttcctgg atcattccaa tttcactcca 1620 atcaatcagc aaattttcgc ttgattggca atagtgttgc tccaccagtt attgttgcgt 1680 tgggtaaagc gttgcaatgt gtaaaattat ttgagcaaga gttgtgtgag gtttagaata 1740 tggcgattaa tccgattact cgtaataaga ttaaggatta tctgaatagt tttattcaac 1800 agcaattatc agtttattcg caacgaagtt tgcgcgaatt tcaggatgtt gatagctatc 1860 cgtcatcgct atcaaaagat ggtgatctga agccgtttca tgcatcactt attcctgcct 1920 caattatgcg cttaaatcgc tttgagcgca gcttgagcac agggcttggc tcaacatttg 1980 aggaatgtac acgcttaatt gcgcttgatc atcatgcagt tgcattacga aattatgata 2040 ttcaagcagc acttgatcaa gcacaatggg cagcaattga tcaattaatt tctacgattg 2100 atcgtggtct gaagcaccaa actccatcac ttaatcaaat gcttgagcaa attcaatcaa 2160 taccattaac cggtattcta gaaacccata ttgttcgcgc agatctgtat attcaacgac 2220 atgatggtag cgaattgttt tttgaaataa aatcgccaaa acctagtaaa ggccaatgcc 2280 ttgaggttat gcaacgcctg ctgcgaattt atacaatcaa acaacaatct gctgtgccag 2340 tcaaggcttt ttatgcaatg gcctataacc cttggggtat tagccgagct agttatcgct 2400 ccagtattac taaaaaatat accgattttt ccaatgctgt tgtgattggt caggagtttt 2460 ggtcgttgat tggagagcca tcaacctaca ccgaattact ggaaatttat catgaagtag 2520 ggttagccaa atctgctgag ataacccaaa aacttttgca atagcctcat aaaggctcgc 2580 aaaagtgata gatacggcga agttgttgga cgatattgcg gctccatggc cagctgaacc 2640 aaacaggata caacatacac aaactctttc acgacaaatt aagcagcaag cccaacgctt 2700 tgaggcagag tgcaacatcc actggcgatt tgggcctttg cttgagcttt attctagcaa 2760 ctggctatga aaaagttgtg gagaattgtt gaaacattaa tcgacaaaat gctgaatttg 2820 gggcttgccg cgcagcattc aaggttgtaa ggtagagctt aggagcgatg ctcgtcgctc 2880 gctaagggtt gttggtatga ttgttgatct ttctacgcgc ttggattgcg ccgctagc 2938 // |
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