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EBI DbfetchID X54523; SV 1; linear; genomic DNA; STD; PRO; 4008 BP. XX AC X54523; XX DT 18-FEB-1991 (Rel. 27, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 17) XX DE Cellvibrio japonicus xynB and xynC genes for xylanase b and DE arabinofuranosidase C XX KW arabinofuranosidase C; xylanase B; xynB gene; xynC gene. XX OS Cellvibrio japonicus OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Cellvibrio. XX RN [1] RP 71-4008 RA Gilbert H.J.; RT ; RL Submitted (29-AUG-1990) to the EMBL/GenBank/DDBJ databases. RL H.J. Gilbert, DEPT. AGRICULTURAL BIOCHEMISTRY &, NUTRITION, NEWCASTLE RL UNIVERSITY, NEWCASLTLE UPON TYNE, NE1 7RU, UK XX RN [2] RP 1-70, 71-4008 RX PUBMED; 2125205. RA Kellette L.E., Poole D.M., Ferreira L.M.A., Durrant A.J., Hazlewood G.P., RA Gilbert H.J.; RT "Xylanase B and an arabinofuranosidase from Pseudomonas fluorescens subsp. RT cellulosa contain identical cellulose-binding domains and are encoded by RT adjacent genes"; RL Biochem. J. 272(2):369-376(1990). XX RN [3] RP 1-4008 RX PUBMED; 1446073. RA Kristensen T., Lopez R., Prydz H.; RT "An estimate of the sequencing error frequency in the DNA sequence RT databases"; RL DNA Seq. 2(6):343-346(1992). XX FH Key Location/Qualifiers FH FT source 1..4008 FT /organism="Cellvibrio japonicus" FT /mol_type="genomic DNA" FT /db_xref="taxon:155077" FT misc_feature 1..22 FT /note="putative VECTOR sequence M13mp18" FT /citation=[3] FT CDS 299..2077 FT /transl_table=11 FT /gene="xynB" FT /product="Xylanase B" FT /db_xref="GOA:P23030" FT /db_xref="HSSP:1EXG" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/Swiss-Prot:P23030" FT /protein_id="CAA38389.1" FT /translation="MTISASDYRHPGNFLKRTTALLCVGTALTALAFNASAACTYTIDS FT EWSTGFTANITLKNDTGAAINNWNVNWQYSSNRMTSGWNANFSGTNPYNATNMSWNGSI FT APGQSISFGLQGEKNGSTAERPTVTGAACNSATTSSVASSSSTPTTSSSSASSVASALL FT LQEAQAGFCRVDGTIDNNHTGFTGSGFANTNNAQGAAVVWAIDATSSGRRTLTIRYANG FT GTANRNGSLVINGGSNGNYTVSLPTTGAWTTWQTATIDVDLVQGNNIVQLSATTAEGLP FT NIDSLSVVGGTVRAGNCGSVSSSSSVQSSSSSSSSSAASAKKFIGNITTSGAVRSDFTR FT YWNQITPENESKWGSVEGTRNVYNWAPLDRIYAYARQNNIPVKAHTFVWGAQSPSWLNN FT LSGPEVAVEIEQWIRDYCARYPDTAMIDVVNEAVPGHQPAGYAQRAFGNNWIQRVFQLA FT RQYCPNSILILNDYNNIRWQHNEFIALAKAQGNYIDAVGLQAHELKGMTAAQVKTAIDN FT IWNQVGKPIYISEYDIGDTNDQVQLQNFQAHFPVFYNHPHVHGITSGICGGQDLDRRLR FT FDPGQWHTAPGNDVVD" FT mat_peptide 299..2074 FT /gene="xynB" FT /product="Xylanase B" FT CDS 2222..3937 FT /transl_table=11 FT /gene="xynC" FT /product="Arabinofuranosidase" FT /db_xref="GOA:P23031" FT /db_xref="HSSP:1EXG" FT /db_xref="InterPro:IPR005193" FT /db_xref="UniProtKB/Swiss-Prot:P23031" FT /protein_id="CAA38390.1" FT /translation="MINHNKTPNILAKVFKRTCGLVSTGAALAILSQAASAACTYTIDS FT EWSTGFTANITLKNDTGAAINNWNVNWQYSSNRMTSGWNANFSGTNPYNATNMSWNGSI FT APGQSISFGLQGEKNGSTAERPTVTGAACNSATTSSVASSSSTPTTSSSSASSVASALL FT LQEAQAGFCRVDGTIDNNHTGFTGSGFANTNNAQGAAVVWAIDATSSGRRTLTIRYANG FT GTANRNGSLVINGGSNGNYTVSLPTTGAWTTWQTATIDVDLVQGNNIVQLSATTAEGLP FT NIDSLSVVGGTVRAGNCGSVSSSSSVQSSSSSSSTPSQTCELKAPLRWTSTGPLISPKN FT PGWISIKDPSIVKYNDTYHVYATYYDTAYRSMYTSFTDWNTAQQAPHISMNGSRVGNTV FT APQVFYFRPHNKWYLITQWAGAYATTDDIRNPNWSAKQKLLQGEPNGALDFWVICNDTH FT CYLYFSRDDGVLYVSKTTLANFPNFSGYSIVMEDHRGNGNSYLFEAANVYKLDGQNRYL FT LMVEAYISGRAFSAPGQRPAWMAHGPLADTEANPFAGMMFCFTMASSLKVYTCY" FT mat_peptide 2222..3934 FT /gene="xynC" FT /product="Arabinofuranosidase" XX SQ Sequence 4008 BP; 1037 A; 1133 C; 956 G; 882 T; 0 other; ggatccccgg gtaccgagct cgaattcgga ttccagggga caaaaaataa taatgcggcc 60 caggctccgg cagtgacagg aagtatttgc cgataaaaaa ttttccaaca gcacttcaga 120 ataagaaatc acagcggtag ttaacgcact gtgaaataca tcaaccaaac tcatgctgca 180 tcagtactca tgtgcaagct gtcgattgta ccccgtactg aattaacccg gtcttcggac 240 cgggtatttt tacaagcagc acccgcaatt catccctata aattccatgg agattaccat 300 gacaatttcc gcaagcgatt accgtcaccc gggtaatttt ttaaaacgta caacagcgct 360 attgtgcgtc ggcactgcac taacagccct ggcctttaac gcatcggctg cctgtaccta 420 caccatcgat agcgaatggt ccaccggctt taccgccaat atcaccctca aaaacgatac 480 cggtgccgcc atcaataact ggaacgtgaa ttggcaatac tccagcaatc gcatgaccag 540 cggctggaat gccaacttct ccggcaccaa cccctacaac gccaccaaca tgagctggaa 600 cggcagcatc gcgccaggac aatccatctc cttcggcctc cagggcgaaa aaaatggcag 660 caccgccgag cgaccaaccg tcaccggcgc cgcttgtaac agtgcaacca ccagctctgt 720 ggcttccagc tcttcaacac ccaccaccag ttcatcttct gcatccagtg tggcctccgc 780 actgctgttg caagaagcac aagccggttt ctgccgtgtg gatggcacca tcgataataa 840 ccacaccggc tttaccggca gtggctttgc caacaccaac aatgcccagg gggcagcggt 900 agtctgggcg atagatgcta ccagcagtgg ccgtcgcacc ctgactatcc gctatgccaa 960 tggtggaacc gccaatcgca atggctcact ggtgattaac ggcggcagca acggtaacta 1020 tacggtgagt ttgcccacga ccggcgcctg gaccacctgg caaaccgcaa ctatcgatgt 1080 ggatttggta cagggcaata atattgtgca gttgtctgca acgacagccg aaggcttacc 1140 caatatagat tcgttaagtg ttgtgggtgg tacggtcagg gcgggtaatt gcggcagtgt 1200 gagcagcagc agttccgtgc aatcgtcatc atcgagcagt agctcaagtg ctgcatcggc 1260 caaaaaattt attggcaaca ttacaacgtc cggcgccgtg agatccgact tcacccgcta 1320 ttggaatcag attactcctg aaaatgaaag caagtggggt tcggttgaag gcactcgtaa 1380 cgtttacaac tgggcgccat tggatcgcat ctatgcctat gcccgccaga ataatattcc 1440 ggtaaaagcc cacacctttg tgtggggtgc acaatcacct tcatggctga acaatttgag 1500 cggcccggaa gttgccgttg aaattgagca gtggattcgc gattactgtg cgcgctaccc 1560 ggataccgcc atgatcgacg tggtgaacga agcggtgcca ggccaccagc ctgcaggtta 1620 tgcgcaaagg gcttttggca ataactggat ccagcgcgtt ttccaactgg cgcgccaata 1680 ttgccccaac tccattttga tcctgaacga ctacaacaat attcgctggc agcacaacga 1740 gtttatcgcg ctcgctaaag cccaaggcaa ttatattgat gcagtcggtc tgcaggctca 1800 cgaattgaaa ggcatgaccg cagcgcaagt taaaaccgcc atcgacaata tttggaacca 1860 ggtgggcaag cccatttaca tttccgaata cgacattggt gacaccaatg accaggttca 1920 attgcagaac ttccaggctc acttccccgt gttctacaac catccacatg tgcatggcat 1980 tacctctggg atatgtggtg ggcaggacct ggatcgaagg ctccggtttg atccaggaca 2040 atggcacacc gcgcccggca atgacgtggt tgattaacaa ttacctcaat caataaaagc 2100 gcctccctgt tgctcataaa caggatttta tgagcaacag ccgctgagta aacatcaccc 2160 gtttttcgtg aacgggctat taaacaatag cgatgaaacc acttttgtaa cggagattat 2220 gatgattaac cacaacaaga ctcccaacat cctcgccaag gtatttaaac gtacctgcgg 2280 cctggtgagt actggtgcag ccctggcgat cttatcccag gctgcgtccg ccgcttgtac 2340 ctacaccatc gatagcgaat ggtccaccgg ctttaccgcc aatatcaccc tcaaaaacga 2400 taccggtgcc gccatcaata actggaacgt gaattggcaa tactccagca atcgcatgac 2460 cagcggctgg aatgccaact tctccggcac caacccctac aacgccacca acatgagctg 2520 gaacggcagc atcgcgccag gacaatccat ctccttcggc ctccagggcg aaaaaaatgg 2580 cagcaccgcc gagcgaccaa ccgtcaccgg cgccgcttgt aacagtgcaa ccaccagctc 2640 tgtggcttcc agctcttcaa cacccaccac cagttcatct tctgcatcca gtgtggcctc 2700 cgcactgctg ttgcaagaag cacaagccgg tttctgccgt gtggatggca ccatcgataa 2760 taaccacacc ggctttaccg gcagtggctt tgccaacacc aacaatgccc agggggcagc 2820 ggtagtctgg gcgatagatg ctaccagcag tggccgtcgc accctgacta tccgctatgc 2880 caatggtgga accgccaatc gcaatggctc actggtgatt aacggcggca gcaacggtaa 2940 ctatacggtg agtttgccca cgaccggcgc ctggaccacc tggcaaaccg caactatcga 3000 tgtggatttg gtacagggca ataatattgt gcagttgtct gcaacgacag ccgaaggctt 3060 acccaatata gattcgttaa gtgttgtggg tggtacggtc agggcgggta attgcggcag 3120 tgtgagcagc agcagttccg tgcaatcgtc atcctcctca tcaagtaccc catcacaaac 3180 ctgtgagtta aaagccccct tgcgctggac ctcgaccggc cccttgatca gccctaaaaa 3240 tccaggctgg atatccatca aggatccgtc catcgtgaaa tacaacgaca cctaccatgt 3300 gtatgcaacc tactatgaca ctgcctaccg atccatgtat accagcttta ccgactggaa 3360 cacggcacag caggcaccgc atatttccat gaacggcagc cgtgtcggca ataccgttgc 3420 accacaggtg ttttatttcc gcccgcataa caaatggtat ttgattaccc agtgggcagg 3480 tgcttatgca accactgacg atatccgtaa ccccaactgg tcagccaaac aaaaactgct 3540 acagggtgag cctaatggcg cgctggattt ctgggtaatt tgtaacgata cccattgtta 3600 tttgtatttc tcgcgcgacg atggtgtgtt gtatgtatcc aagacaaccc ttgccaactt 3660 cccgaatttc tcaggctatt cgattgtgat ggaagatcac cgcggcaatg gcaacagcta 3720 tctgtttgaa gcagccaatg tgtacaagct ggatggacaa aaccgatatc tgttaatggt 3780 ggaagcctat atcagcggcc gcgctttttc cgctcctgga cagcgaccag cctggatggc 3840 ccatggaccc ttggctgaca cagaagccaa tccctttgcc gggatgatgt tttgtttcac 3900 gatggcttcc tcattaaagg tttacacctg ttattaatgt acggaggaaa gcatcagagc 3960 acaccgacgg cgtcgatgtt gctgatgcaa tcaaaacaat gattggaa 4008 // |
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