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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X17067; SV 1; linear; mRNA; STD; PLN; 1146 BP.
XX
AC   X17067;
XX
DT   10-MAR-1990 (Rel. 23, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Avena sativa mRNA for protochlorophyllide reductase
XX
KW   NADPH dehydrogenase; photosynthesis; protochlorophyllide reductase;
KW   reductase.
XX
OS   Avena sativa (oat)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Poeae; Aveninae; Avena.
XX
RN   [1]
RP   1-1146
RA   Griffiths W.T.;
RT   ;
RL   Submitted (02-NOV-1989) to the EMBL/GenBank/DDBJ databases.
RL   Griffiths W.T., University of Bristol, Department of Biochemistry, School
RL   of Medical Sciences, BS8 1TD, UK.
XX
RN   [2]
RP   1-1146
RX   PUBMED; 1689568.
RA   Darrah P.M., Kay S.A., Teakle G.R., Griffiths W.T.;
RT   "Cloning and sequencing of protochlorophyllide reductase";
RL   Biochem. J. 265(3):789-798(1990).
XX
DR   GrainGenes; X17067; X17067.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1146
FT                   /organism="Avena sativa"
FT                   /strain="Peniarth"
FT                   /mol_type="mRNA"
FT                   /clone_lib="lambda gt11"
FT                   /clone="p127"
FT                   /tissue_type="etiolated leaves"
FT                   /db_xref="taxon:4498"
FT   CDS             <1..944
FT                   /codon_start=3
FT                   /product="protochlorophyllide reductase (314 AA)"
FT                   /db_xref="GOA:P15904"
FT                   /db_xref="InterPro:IPR002198"
FT                   /db_xref="InterPro:IPR002347"
FT                   /db_xref="InterPro:IPR005979"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:P15904"
FT                   /protein_id="CAA34913.1"
FT                   /translation="VVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG
FT                   MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEM
FT                   SVGVNHLGHFLLARLLLEDLQKSDYPSRRLVIVGSITGNDNTLAGNVPPKANLGDLRGL
FT                   AGGLTGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFSSLYPGCI
FT                   ATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYWSWNKD
FT                   SASFENQLSQEASDPEKARKVWELSEKLVGLA"
FT   polyA_signal    1119..1125
FT                   /note="pot. polyadenylation signal"
FT   polyA_site      1146..1146
FT                   /note="polyadenylation site"
XX
SQ   Sequence 1146 BP; 215 A; 374 C; 361 G; 196 T; 0 other;
     gcgtggtggt gatcacgggc gcgtcgtcgg gcctcggcct cgcggcggcc aaggcgctgg        60
     cggagacggg caagtggcac gtggtcatgg cgtgccgcga cttcctcaag gcgtccaagg       120
     ccgccaaggc ggcgggcatg gcggacggga gctacacggt gatgcacctg gacctcgcct       180
     ccctcgacag cgtccggcag ttcgtggacg ccttccgccg cgccgagatg ccgctggacg       240
     tgctggtgtg caacgccgcc atctaccgcc ccacggcgcg caagccgacg ttcaccgctg       300
     agggggtcga gatgagcgtg ggcgtcaacc acctcggcca cttcctcctg gcacgtctgc       360
     tcctggagga cctgcagaag tccgactacc cgtcccgccg cctcgtcatc gtcggctcga       420
     tcaccggcaa cgacaacacg ctcgcgggca acgtgccgcc caaggccaac ctgggcgacc       480
     tccgcgggct cgccggcggc ctcaccggcg catccgggtc cgccatgatc gacggcgacg       540
     agagcttcga cggcgccaag gcctacaagg acagcaaggt ctgcaacatg ctcaccatgc       600
     aggagttcca ccggaggtac cacgaggaca ccgggatcac cttctcctcc ctctaccccg       660
     gctgcatcgc caccaccggc ctcttcaggg agcacatccc gctcttccgc acgctcttcc       720
     cgccgttcca gaagttcgtg accaaggggt tcgtgtcgga ggcggagtcc gggaagaggc       780
     tcgcgcaggt ggtcggggag cccagcctca ccaagtccgg cgtgtactgg agctggaaca       840
     aggactcggc gtccttcgag aaccagctct ctcaggaggc cagcgacccc gagaaggcgc       900
     gcaaggtctg ggagctcagt gagaagctcg tcggactcgc ctgattcatc aacgagctgg       960
     atctgagtgc caaaacctgg tcgcattttt accgttggta attaccattt tcaagtcttg      1020
     tttagggaac tcaattacac gagaggcctt tgcgagtgtc cgcgggagta catagatctc      1080
     gggtggaaga tgtacaattt tcggcgaacc attggaataa taaaaccgca ggcctaattg      1140
     aggatg                                                                 1146
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