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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X15869; SV 1; linear; mRNA; STD; PLN; 1490 BP.
XX
AC   X15869;
XX
DT   23-NOV-1989 (Rel. 21, Created)
DT   09-MAY-1995 (Rel. 43, Last updated, Version 4)
XX
DE   Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
XX
KW   NADPH-protochlorophyllide oxidoreductase.
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OS   Hordeum vulgare
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1490
RX   DOI; 10.1007/BF02464904
RX   PUBMED; 2671659.
RA   Schulz R., Steinmueller K., Klaas M., Forreiter C., Rasmussen S.,
RA   Hiller C., Apel K.;
RT   "Nucleotide sequence of a cDNA coding for the NADPH-protochlorophyllide
RT   oxidoreductase (PCR) of barley (Hordeum vulgare L.) and its expression in
RT   Escherichia coli";
RL   Mol. Gen. Genet. 217(2-3):355-361(1989).
XX
DR   GrainGenes; X15869; X15869.
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CC   Data kindly reviewed (26-OCT-1989) by Schulz R.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1490
FT                   /organism="Hordeum vulgare"
FT                   /cultivar="Carina"
FT                   /mol_type="mRNA"
FT                   /clone="A7"
FT                   /tissue_type="leaves"
FT                   /db_xref="taxon:4513"
FT   CDS             94..1260
FT                   /note="precursor peptide (AA -74 to 314)"
FT                   /db_xref="GOA:P13653"
FT                   /db_xref="HSSP:1FDS"
FT                   /db_xref="InterPro:IPR005979"
FT                   /db_xref="UniProtKB/Swiss-Prot:P13653"
FT                   /protein_id="CAA33879.1"
FT                   /translation="MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVR
FT                   TQVATAPSPVTTSPGSTASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVM
FT                   ACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIY
FT                   RPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSRRMVIVGSITGNSNTL
FT                   AGNVPPKASLGDLRGLAGGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRY
FT                   HEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVA
FT                   EPVLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA"
FT   sig_peptide     94..315
FT                   /note="transit peptide (AA -74 to -1)"
FT   mat_peptide     316..1257
FT                   /note="NADPH-protochlorophyllide oxidoreductase (AA 1 to
FT                   314)"
FT   polyA_site      1461..1466
FT                   /note="polyA signal"
FT   misc_feature    1490..1490
FT                   /note="polyA site"
XX
SQ   Sequence 1490 BP; 280 A; 482 C; 478 G; 250 T; 0 other;
     gcggaattcc gcagcacagt gcactcgagt tcgagctcgt tgaactcctg cagtgcagtg        60
     ctagctagcg acagtccaag ctcaccgtca tccatggctc tccagcttct cccctccacc       120
     ctctccgtcc ccaagaaggg cagcagcatg ggcgcagtgg cggtgaagga cacggcggcg       180
     ttcctgggcg tgagcagcaa ggcgaagaag gcgtcgctgg cggtgaggac gcaggtggcc       240
     acggcgcctt cgccggtgac gacgagcccg ggctcgaccg cgtcgtcgcc gagcggcaag       300
     aagacgctgc ggcagggcgt ggtggtgatc acgggcgcgt catccgggct gggcctggcg       360
     gcggccaagg cgctggccga gacgggcaag tggcacgtcg tcatggcgtg ccgcgacttc       420
     ctcaaggcct ccaaggcggc caaggcggcg ggcatggcgg acggcagcta caccgtcatg       480
     cacctcgacc tcgcctccct cgacagcgtc cggcagttcg ttgacgcgtt ccgccgcgcc       540
     gagatgccgc tggatgtgct ggtgtgcaac gccgccatct accggcccac ggcgcgcacg       600
     ccgaccttca ccgccgacgg gcacgagatg agcgtgggcg tgaaccacct gggccacttc       660
     ctgctcgccc gcctcctcat ggaggacctc cagaagtccg actacccgtc ccgccgcatg       720
     gtcatcgtcg gctccattac cggcaacagc aacacgctgg cgggcaacgt gccgcccaag       780
     gccagcctcg gcgacctccg cgggctggcc ggaggcctca gcggcgcgtc cggctccgcc       840
     atgatcgacg gcgacgagag cttcgacggc gccaaggcgt acaaggacag caaggtgtgc       900
     aacatgctga ccatgcagga gttccaccgg cggtaccacg aggagaccgg catcaccttc       960
     tcctcgctct acccgggctg catcgccacc acggggctgt tccgggagca catcccgctg      1020
     ttccggaccc tcttcccgcc gttccagaag ttcgtcacca aggggttcgt gtcggaggcg      1080
     gagtccggca agaggctggc gcaggtggtg gcggagccag tcctgacaaa gtccggcgtg      1140
     tactggagct ggaacaagga ctcggcgtcc ttcgagaacc agctctccca ggaggccagc      1200
     gaccccgaga aggcccgcaa ggtctgggag ctcagcgaga agctcgtcgg actcgcatga      1260
     tccaccgcaa atcccatgga tgcatgcatg catctaggac gccggccgat gctcaacttg      1320
     tcgttttttt aaacttattt ggtaattatc atgtttacgc ctttttagaa gctcaattac      1380
     gcaggagagg ccttgcgagt ggccgcgaga gtgcatagat ctcgtgtgga agatgtacaa      1440
     ttttcggcaa acattggaat aataaaaccg caggcctgat tgaggatgac                 1490
//
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