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EBI DbfetchID X06144; SV 1; linear; genomic DNA; STD; PRO; 3960 BP. XX AC X06144; XX DT 04-JUL-1988 (Rel. 16, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 6) XX DE P. vulgaris frd operon for fumarate reductase (EC 1.3.99.1) XX KW frd operon; fumarate reductase. XX OS Proteus vulgaris OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Proteus. XX RN [1] RP 1-3960 RX DOI; 10.1111/j.1432-1033.1987.tb13362.x RX PUBMED; 3308458. RA Cole S.T.; RT "Nucleotide sequence and comparative analysis of the frd operon encoding RT the fumarate reductase of Proteus vulgaris. Extensive sequence divergence RT of the membrane anchors and absence of an frd-linked ampC cephalosporinase RT gene"; RL Eur. J. Biochem. 167(3):481-488(1987). XX CC Data kindly reviewed (25-JUL-1988) by COLE S.T. XX FH Key Location/Qualifiers FH FT source 1..3960 FT /organism="Proteus vulgaris" FT /mol_type="genomic DNA" FT /db_xref="taxon:585" FT RBS 500..503 FT /note="ribosome binding site" FT CDS 511..2307 FT /transl_table=11 FT /note="frdA (AA 1-598)" FT /db_xref="GOA:P20922" FT /db_xref="InterPro:IPR003952" FT /db_xref="InterPro:IPR003953" FT /db_xref="InterPro:IPR004112" FT /db_xref="InterPro:IPR005884" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR014006" FT /db_xref="InterPro:IPR015939" FT /db_xref="UniProtKB/Swiss-Prot:P20922" FT /protein_id="CAA29501.1" FT /translation="MQTFNADIAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSH FT TVAAEGGSAAVTQAHDSYDFHFNDTVSGGDWLCEQDVVDYFVEHCPTEMTQLELWGCPW FT SRKEDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILV FT DEGHARGVVAINMMEGTKVQIRANAVIMATGGAGRVYRFNTNGGIVTGDGMGIALRHGV FT PLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPLGKPENK FT YMELGPRDKVSQAFWHEWRAGRTIKTHRGDVVHLDLRHLGAKKLHERLPFICELAKAYV FT GVDPVNEPIPVRPTAHYTMGGIETNQRTETRIKGLFAVGECSSVGLHGANRLGSNSLAE FT LVVFGRLAGEEAVRRAQEATPANASALDAQTRDIEDNLKKLMNQKGSENWAQIRDEMGE FT AMEEGCGIYRTPELMQKTIDKLTELKERFKHVEIKDTSSVFNTDLLYKIELGFGLDVAE FT CMAHSAFNRKESRGAHQRLDEGCTERDDVNFLKHTLAFYNPEGAPRLEYSDVKITKSAP FT AKRVYGGEATAQDKQNKEKANG" FT RBS 2286..2292 FT /note="ribosome binding site" FT CDS 2300..3037 FT /transl_table=11 FT /note="frdB (AA 1-245)" FT /db_xref="GOA:P20921" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR004489" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/Swiss-Prot:P20921" FT /protein_id="CAA29502.1" FT /translation="MADDMKHVKMEVMRYNPETDDAPHFVTYDVPYDEQTSLLDALGYI FT KDNLAPDLSYRWSCRMAICGSCGMMVNRVPKLACKTFMRDYPNGVRIEALGNFPVERDL FT VVDMTHFIESLEAIKPYILGNDRKPSEGPNKQTPAQMAKYHQFSGCINCGLCYAACPQF FT GLNPEFIGPAAITLAQRYNTDSRDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDP FT AAAIQQGKAASAQDFVIAMLKPR" FT RBS 3035..3042 FT /note="ribosome binding site" FT CDS 3052..3447 FT /transl_table=11 FT /note="frdC (AA 1-131)" FT /db_xref="GOA:P20923" FT /db_xref="InterPro:IPR003510" FT /db_xref="UniProtKB/Swiss-Prot:P20923" FT /protein_id="CAA29503.1" FT /translation="MTTKRKPYVRGMQPNWWTKLGFYRFYITREGTCLPQLWFSLVVLF FT GVFALKNGPESWAGFVGFLSNPILMLINIVTLIATVFHTATWFKLAPKAVNIVVKDEKL FT PQEPIVRGLWGLTIVVTVVILAVALIV" FT RBS 3451..3457 FT /note="ribosome binding site" FT CDS 3462..3821 FT /transl_table=11 FT /note="frdD (AA 1-119)" FT /db_xref="GOA:P20924" FT /db_xref="InterPro:IPR003418" FT /db_xref="UniProtKB/Swiss-Prot:P20924" FT /protein_id="CAA29504.1" FT /translation="MNQNQLPKRSDEPIFWGLFGAGGMWSAIVSPAIIILLGILIPMGI FT APEAFTYDRIMAFSQGFIGRIFLLLMIILPVWCALHRIHHTLHHFKVHVPASNWVFYGA FT AAIISVIAIIGVFTL" FT terminator 3841..3863 FT /note="transcription terminator" XX SQ Sequence 3960 BP; 1139 A; 783 C; 867 G; 1170 T; 1 other; atcgatttgt tttagataaa tagtaaaagt ttattttaac tatttgttta tatttttatt 60 aaattatatt aaaacagctt aaagataatt tattttacct taaaaatcag tcaataacaa 120 aaaaccattg ttctttgtaa ttcaaattat ctatacttta aaaacgaatt attcattgct 180 aactttattt ttattttaga attaaatatt ttattttatg ctcaagttta tctggttaat 240 tattagtaaa accgagaatt cttggtgtag atcacacttt ttttgtgaaa tacgggaaaa 300 ccatcattca tatcaaattt ccgtacctta catttcgtta tactaaaatt acagtcaatg 360 ataataacga tgttatcaag cgtagtcaca aggcagtgaa acattttcgt tacggatagc 420 ttaaaaaaat agcattacta aattaataat gtcagtgaat tgaattctag acaattattc 480 caattttcac ttgaacaatg gagaagcgca gtgcaaacct ttaatgccga tatagcgata 540 atcggagccg ggggcgcagg cttacgagca gcaattgctg cagcggaagc aaatcctcaa 600 ctgaaaattg ctctgatctc aaaagtttac cctatgcgta gccacactgt ggcagcagaa 660 ggcggatcag cagcagtgac tcaggctcac gactcctacg actttcactt caatgatacc 720 gtttctggcg gtgactggtt gtgtgagcag gatgtcgttg attacttcgt tgagcattgt 780 ccaacagaga tgactcaact agaactctgg ggctgtcctt ggagccgtaa agaagacggg 840 tcagtcaacg tccgacgttt tggtgggatg aaaatcgaac ggacttggtt cgccgccgat 900 aaaaccggct tccacatgtt acacaccctg ttccaaacct ctttaaaata cccacaaatt 960 caacgtttcg atgaacattt cgttctcgat atccttgttg atgaaggcca cgctcgtggt 1020 gtcgttgcta ttaatatgat ggaagggacg aaagttcaaa ttcgtgctaa tgctgtcatt 1080 atggcaacag gtggcgcagg tcgcgtttat cgctttaata ctaatggcgg tatcgttaca 1140 ggtgatggta tggggatagc cttacgtcat ggcgtgccac tgcgtgatat ggaatttgtg 1200 caatatcacc caactggttt accgggctca ggtattctga tgaccgaagg ttgccgtggt 1260 gaagggggta ttctggtcaa taaagatggt taccgttatc tacaagatta tggcctaggn 1320 ccagaaacac cattaggtaa acccgaaaat aaatatatgg aattaggtcc tcgcgataaa 1380 gtttctcaag cattctggca tgagtggcgc gcgggtcgta ccattaaaac tcaccgtggt 1440 gatgttgtgc atcttgattt acgtcatctg ggtgcgaaaa aacttcatga acgtttacca 1500 ttcatttgtg aactggcaaa agcgtatgtg ggtgttgatc cagttaatga acctattcca 1560 gttcgtccaa ctgcacacta caccatgggt ggtatcgaga ctaatcagcg cacagaaaca 1620 cgtattaaag gtctgtttgc ggtgggtgag tgttcatctg tcggcttaca tggcgctaac 1680 cgtttaggtt ctaactcact ggctgaactt gtagtatttg gtcgtcttgc tggggaagaa 1740 gccgttcgtc gtgcccaaga agcaacccct gctaacgcat cagcattaga tgcacaaact 1800 cgtgacatcg aagacaatct gaaaaaactg atgaaccaaa aaggttctga aaattgggct 1860 cagatccgcg atgaaatggg tgaagccatg gaagaaggtt gcggtatcta tcgtacacct 1920 gaattaatgc aaaaaaccat tgataaactg actgaactaa aagaacgttt taaacacgta 1980 gaaattaaag ataccagtag cgtctttaat actgatttac tgtataaaat tgagcttggc 2040 tttggtttag atgtcgctga atgtatggcg cattctgcat tcaatcgtaa agagtctcgt 2100 ggtgcacacc aacgtcttga cgaaggttgt actgagcgtg atgacgtgaa cttccttaaa 2160 cacactctgg cattctataa cccagaaggt gcaccgcgtt tagaatatag cgatgtgaag 2220 atcaccaaat ctgctcctgc taaacgtgtc tatggtggtg aagcgactgc acaagacaag 2280 cagaataagg agaaagcgaa tggctgatga catgaagcac gttaagatgg aagtcatgcg 2340 ctataacccc gaaacggatg atgcgcctca tttcgtcact tatgatgtgc cttacgatga 2400 gcaaacctca ttattggatg cattgggtta tattaaagat aacttagcgc cagatctgtc 2460 ttaccgttgg tcttgccgta tggcgatttg tggctcttgt ggcatgatgg ttaaccgagt 2520 cccaaaactg gcttgtaaaa cctttatgcg tgactaccca aatggggtga gaatcgaagc 2580 gttaggtaac ttccctgtcg agcgcgacct tgtcgtcgat atgactcact ttattgaaag 2640 cttagaagcg attaaacctt acattttagg aaatgatcgt aagccttcag aaggtccaaa 2700 taaacagact cctgctcaaa tggcgaaata ccaccaattc tctggttgta tcaactgtgg 2760 tttatgctat gcagcatgtc ctcagtttgg tttaaatcct gagtttattg gtcctgcagc 2820 gattacgtta gcacaacgtt acaataccga tagccgtgac cacggggcta aagagcgtat 2880 gcctcaatta aatggtgaaa atggcgtctg gtcttgtact ttcgtgggct actgctctga 2940 agtctgtcca aaacatgtgg atcctgctgc ggctattcag cagggtaaag cagccagtgc 3000 gcaagacttt gtcattgcca tgctgaaacc acgttaagga ggaaacaaga catgacaaca 3060 aaacgtaagc cttatgttcg tggtatgcag ccaaactggt ggacgaaact cggtttctat 3120 cgtttctaca tcacccgtga aggaacttgt ctaccacaac tttggttcag tctggttgta 3180 ctgttcggtg tatttgcact gaaaaatgga ccagaaagtt gggcgggatt cgttggattc 3240 ctaagtaacc caatactgat gctgattaat attgtgaccc ttatcgcaac ggtattccat 3300 acggccactt ggtttaagct tgcaccgaaa gccgttaata tcgtcgttaa agatgaaaaa 3360 ttaccacaag agcctatcgt tcgtggttta tggggtctaa ccatcgtcgt gactgtcgtt 3420 attctggcag tggcgctaat tgtttaaccc aggaggaaat aatgaatcag aatcaacttc 3480 ctaagcgctc tgatgaacct attttctggg gattatttgg tgcaggtggt atgtggagtg 3540 cgattgtctc tccagcaatt attatcctgc tcggtattct aatcccgatg ggtattgcgc 3600 cagaagcatt tacttacgat cgtatcatgg catttagcca aggttttatt ggtcgtattt 3660 tcttactgct aatgattatt ctgccagttt ggtgtgcatt acaccgtatt caccatacgt 3720 tgcaccattt taaagtgcat gtacctgcta gtaattgggt attttatggt gctgcagcaa 3780 ttattagcgt tatcgcaatt attggtgttt ttacactata atcgcttgat aaataaaatt 3840 aaagccactc attgagtggc tttttttatc gctaaactgc gtgaatataa aaattaactc 3900 gccaatttca aaccaataat accgaaaaca atcatcgcta aactcaataa acgataaata 3960 // |
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