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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X05350; SV 1; linear; genomic DNA; STD; PLN; 1190 BP.
XX
AC   X05350;
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Parsley 4CL-1 gene 5'end for 4-coumarate=CoA ligase (Pc4CL1)
XX
KW   4-coumarate-CoA ligase.
XX
OS   Petroselinum crispum (parsley)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; apioid superclade;
OC   Apium clade; Petroselinum.
XX
RN   [1]
RP   1-1190
RX   PUBMED; 16453765.
RA   Douglas C., Hoffmann H., Schulz W., Hahlbrock K.;
RT   "Structure and elicitor or u.v.-light-stimulated expression of two
RT   4-coumarate:CoA ligase genes in parsley";
RL   EMBO J. 6(5):1189-1195(1987).
XX
DR   EPD; EP16015; PC_4CL1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1190
FT                   /organism="Petroselinum crispum"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:4043"
FT   repeat_region   518..568
FT                   /note="direct repeat 1"
FT   repeat_region   724..775
FT                   /note="direct repeat 1"
FT   misc_feature    960..963
FT                   /note="pot. regulatory sequence"
FT   promoter        963..969
FT                   /note="pot. CAAT box"
FT   misc_feature    979..982
FT                   /note="pot. regulatory sequence"
FT   misc_feature    989..992
FT                   /note="pot. regulatory sequence"
FT   misc_feature    993..999
FT                   /note="pot. regulatory sequence"
FT   misc_feature    1020..1024
FT                   /note="pot. regulatory sequence"
FT   misc_feature    1027..1032
FT                   /note="pot. regulatory sequence"
FT   misc_feature    1033..1037
FT                   /note="pot. regulatory sequence"
FT   misc_feature    1040..1043
FT                   /note="pot. regulatory sequence"
FT   misc_feature    1045..1050
FT                   /note="pot. regulatory sequence"
FT   promoter        1062..1067
FT                   /note="pot. TATA box"
FT   precursor_RNA   1089..>1190
FT                   /note="primary transcript"
FT   CDS             1167..>1190
FT                   /note="4-coumarate CoA ligase (AA 1-8)"
FT                   /db_xref="GOA:P14912"
FT                   /db_xref="HSSP:1LCI"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/Swiss-Prot:P14912"
FT                   /protein_id="CAA28959.1"
FT                   /translation="MGDCVAPK"
XX
SQ   Sequence 1190 BP; 439 A; 209 C; 117 G; 425 T; 0 other;
     tcaaataaaa atccacattg aataaatgag caatgagttt gggttgctgc actacctgta        60
     ttttttttaa tttgttattt taattaagta ccacctaata ttaatgggga cggatacttg       120
     ttaggtgaaa attatgtgta atccaaacgt cgctagctaa atactcaaat tagaccaagg       180
     ttttaaaact aaattaagta gatataatca attttgattt taaatacagt tattcgattt       240
     taaatttatg caagttctcc taaaactgag ataatatctt actactaaaa tctactatat       300
     gttatggata tactttatat gaatatttaa ggaaatattt tatctgaagt tttaagaatt       360
     tgttttaaat tttaaaaatt caaatatact tcttccagat ttcaaataat caattattaa       420
     aacatgataa tattaaatat taaaaagttt ttcaaattct tgatgtatcc tcatcaaata       480
     cccagattct cgaggatgac tttagatata ctttagcata ccaagatttc aaaaagtttt       540
     ccaatttctt tatcaaatac tcacagattt ttacaaattt cagattcttc aaaatataga       600
     aataaaagaa ttagataaaa tatgatgcta tttaatatta ctaattttgt tttttttaat       660
     ctagcttggt ttatcagaat caaataagcc agactcttaa ggataattca aaatattaat       720
     gtgatatacc aagattcaaa aaagttttcg aaatccatat caaatactta cagatattat       780
     aaattttgaa aaatctatat taaatatgtc agattttcaa aataaataaa atccgaaatg       840
     aatttaaaga aaatgccgtc ctatatattt gtgagttggt aaatctcgcc atcacatgct       900
     gcttcatctt agtcaacttt ttcccttcat cacctaacac acaatatttt tctcaccaac       960
     cccactcata atttaattcc ccattttacc cctaaccaaa cctcatattc cgataaactc      1020
     cccctttacc aacccccatc cccttaccaa accctccaca tttatatgtt gaattgttca      1080
     tcatctaaca tgtaagaaac ctctcttact catcatcgtt tcaacaccaa aaacacacac      1140
     acaactaaca ttttcatttt ctcattatgg gagattgtgt agcacccaaa                 1190
//
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