 |
|
EBI DbfetchID X03048; SV 1; linear; genomic DNA; STD; INV; 6778 BP. XX AC X03048; XX DT 02-JUL-1986 (Rel. 09, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Drosophila mulleri adh genes for alcohol dehydrogenase (adh-1, adh-2, DE pseudo-adh) XX KW alcohol dehydrogenase; direct repeat; pseudogene. XX OS Drosophila mulleri OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila. XX RN [1] RP 1-6778 RX DOI; 10.1093/nar/13.19.6899 RX PUBMED; 2997730. RA Fischer J.A., Maniatis T.; RT "Structure and transcription of the Drosophila mulleri alcohol RT dehydrogenase genes"; RL Nucleic Acids Res. 13(19):6899-6917(1985). XX DR EPD; EP11036; DMU_ADH1. DR EPD; EP11037; DMU_ADH2. XX FH Key Location/Qualifiers FH FT source 1..6778 FT /organism="Drosophila mulleri" FT /mol_type="genomic DNA" FT /db_xref="taxon:7231" FT repeat_region 289..293 FT /note="direct repeat 1" FT repeat_region 295..299 FT /note="direct repeat 1" FT repeat_region 301..305 FT /note="direct repeat 1" FT repeat_region 350..354 FT /note="direct repeat 2" FT repeat_region 371..375 FT /note="direct repeat 1" FT repeat_region 372..376 FT /note="direct repeat 3" FT repeat_region 383..387 FT /note="direct repeat 1" FT repeat_region 384..388 FT /note="direct repeat 3" FT repeat_region 388..396 FT /note="direct repeat 4" FT repeat_region 403..407 FT /note="direct repeat 2" FT repeat_region 423..430 FT /note="direct repeat 4" FT misc_feature 525..525 FT /note="transcription start site" FT CDS join(557..646,731..1101,1167..1432) FT /pseudo FT /gene="ADH" FT intron 647..730 FT /number=1 FT intron 1102..1166 FT /number=2 FT polyA_signal 1491..1496 FT repeat_region 2320..2326 FT /note="direct repeat 5" FT repeat_region 2328..2334 FT /note="direct repeat 5" FT repeat_region 2338..2346 FT /note="direct repeat (truncated) 6" FT repeat_region 2527..2531 FT /note="direct repeat 7" FT repeat_region 2552..2556 FT /note="direct repeat 1" FT repeat_region 2553..2557 FT /note="direct repeat 3" FT repeat_region 2562..2569 FT /note="direct repeat 4" FT repeat_region 2565..2568 FT /note="direct repeat 7" FT repeat_region 2573..2580 FT /note="direct repeat 4" FT repeat_region 2576..2579 FT /note="direct repeat 7" FT TATA_signal 2633..2638 FT misc_feature 2659..2659 FT /note="transcription start site" FT CDS join(2721..2813,2870..3274,3333..3599) FT /gene="Adh2" FT /db_xref="FLYBASE:FBgn0012582" FT /db_xref="GOA:P07160" FT /db_xref="HSSP:1B16" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P07160" FT /protein_id="CAA26856.1" FT /translation="MVIANKNIIFVAGLGGIGFDTSREIVKSGPKNLVILDRIENPAAI FT AELKALNPKVTVTFYPYDVTVSVAETTKLLKTIFDKLKTVDLLINGAGILDDYQIERTI FT AVNFTGTVNTTTAIMSFWDKRKGGPGGIIANICSVTGFNAIYQVPVYSASKAAALSFTN FT SLAKLAPITGVTAYSINPGITKTTLVHKFNSWLDVEPRVAELLLEHPTQTTLQCAQNFV FT KAIEANQNGAIWKLDLGTLEAIEWTKHWDSHI" FT intron 2814..2869 FT /number=1 FT intron 3275..3332 FT /number=2 FT polyA_site 3712..3717 FT repeat_region 5251..5262 FT /note="direct repeat 6" FT repeat_region 5336..5347 FT /note="direct repeat 6" FT repeat_region 5442..5446 FT /note="direct repeat 3" FT repeat_region 5447..5451 FT /note="direct repeat 1" FT repeat_region 5448..5452 FT /note="direct repeat 3" FT TATA_signal 5512..5517 FT misc_feature 5538..5538 FT /note="approximate transcription start site" FT CDS join(5593..5685,5742..6146,6207..6473) FT /gene="Adh1" FT /db_xref="FLYBASE:FBgn0012581" FT /db_xref="GOA:P07161" FT /db_xref="HSSP:1B16" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P07161" FT /protein_id="CAA26857.1" FT /translation="MAIANKNIIFVAGLGGIGFDTSREIVKSGPKNLVILDRIENPAAI FT AELKALNPNVTVTFYPYDVTVPVAETTKLLQKIFDQLKTVDLLINGAGILDDYQIERTI FT AVNFTGTVNTTTAIMSFWDKRKGGPGGVIANICSVTGFNAIYQVPVYSASKAAALSSTN FT SLAKLAPITGVTAYSINPGITKTPLVHKFNSWLDVEPRVAELLLEHPTQTSLQCAQNFV FT KAIEANQNGAIWKLDLGTLEAIEWTKHWDSHI" FT intron 5686..5741 FT /number=1 FT intron 6147..6206 FT /number=2 FT polyA_signal 6555..6560 XX SQ Sequence 6778 BP; 2061 A; 1456 C; 1375 G; 1886 T; 0 other; tgctcaattt gctgcgacca caacaaaaat aacaaagttc ttgactacgt cgattgcttt 60 gacattcagt gaaaggttaa atctcctctc catgctagct gcgaactgca aatgcgctcc 120 tccctctcta tctctcactc ttttccatca actatcgcac agtgctcgat gtttccatat 180 acatatgtgt atgtatgtgc atgcgtatgt gtgtgtatcg ctgtgtactg ctgcatatcg 240 cctatttgct ctcccatatt tacagcagac gatttcatta cttagacatc gacctcgaca 300 tcgaccgcct ccacgactta gagacctgaa ctatgtaact atttaaggcg ctgccaagtt 360 ggcgtcaaag tcgacgtcga tgtcgacgtc agcgttgact tcgctgccgg gctatttgat 420 aagtcagctt aaaaattttc ctccaatacc gacagcctcg acagcacgat taccaataac 480 agagaaatag ttcgactttt agtaatcctc aacatgcact tcacttttta ctctggacag 540 ggaagcggcg gcaccgatgc aatcgctggc caagaatatc atcttcgtcg cggcctgggt 600 tgcattggta tggacacagc cgagagattg tcaagagcgg cccaaggtaa ggtagtatct 660 ctgcataata gatctttcaa tacaaattgc atgtggtaca tagaatctgg ttatccttga 720 tcgacttgag aagccagact ggattgaaga acttagtgcc ctgaatccaa aaacaaaagt 780 atctttccat gcctacgatg taaccgttcc attagaggaa gtccgcaaag ctcatgaaaa 840 caatcttcga caagctgaag acagtcgatc tgctcatcaa cggagctggc atgctggacg 900 atcacgcgat cgaacaaacc attgcggtga acttcacagg cacagtgaac acaccaggcc 960 atcatgccct tctggacaag cgccaggcgg cccaggcgtg tcattgcgac actgctcggt 1020 gactggcttc aactcaatct accaggtgcc cgtttattgt gcctccaagc agctgccctc 1080 agcttcacca tgtcgctggc tgtaagtgat gagcctatat cgatttaata atgtgtgcag 1140 cggttgtcgt tcctccctct ctatagagac tggccccgat tactggcgta actgcctact 1200 ccatcaatcc tggtatcacg aagacaaccc tagtcaacaa gttcaactcg tggctggatg 1260 tggagccttg tgtggcccag ttgcttctgg cgcatcccac tcagacgact aagcagtgcg 1320 ccagagcttt gtgaaagcaa tcaaagaaaa caagaatgga gctatatgga agctggactt 1380 gggtcgcctg gatgccatta agtggaccaa gcactgggac tctcacatct aattgctaaa 1440 ttcgcgaaaa ttagaagttt atagccgaca gaccagattc ccgaaagtca aataaatttt 1500 aagtttaaat tgtaaggcta acaacagatt agatatttct agggaaataa atataattta 1560 ttgaattgca aaatctaata tctcaatcgg gtaaaggaat tgggcatttg gtagattctg 1620 cgtcggaata gaattttatt ttcataaata tgatatgatt cctaaaaata tctatgcaaa 1680 tttcctgttt ttcaactttt attaaaataa aatcttggtg ttattttagt tctgtgataa 1740 gctcaatctt cgtgtgtgct gcaatctctg tgcatccagt cagttagttt atatacgaaa 1800 tagaatctaa acatagaaca gaattgccaa cgttttgaat ataaagtctt tagtattatt 1860 tgcgtcatat gataactcac tttcataaaa acatttgaca agttcagaaa acaagcaaat 1920 agttgcaaga gtataccctc gtttgagccg ccggttattt agctatactc ttattcaaag 1980 ctaattgaaa actggtttcc tgcaatatct cctagtttac tccataaaat taactctgag 2040 ataaacgtta gcacacagta gatcacaccc ttctgtatgc ttcatatatt cgttagcttt 2100 ctgcaccgta tttaactatc ggagtattta tagtatttat atacaattag ttacttgata 2160 tggaagaaaa tatatatcta ctttaataaa acagtcggac gaatttcatt atacagtaat 2220 atggatcata gggtatgaca cagttgagaa cacctcaatt ctagctctag ttgtattata 2280 aataaattag ttcagggagg tggcgcatga tgtgtactct gcgtagctgc gtagaatgta 2340 gaatttaatt tctacacata aacgcaaaca cgcgaagaca cgagcgttta gaaaaagaca 2400 aataaaacca aaaaatgatc attccgagtc taaataaagc acacggaata cgtaaaaccg 2460 gcatgatttg ctttgacttt ggagaacata aaaccaaaca gcaacgaatc aaaacaaaac 2520 accagcagct ctgcccgagc tggcgtctaa gtcgacgcaa cgtcagcttc gcgtcagctt 2580 attgataagc caactgagag atttgcttgc aatatgaccg gcagtgcagt tataaatact 2640 gggcactgag ctactcggac ttattcgcaa ttcacttttc gcttgaacag gtgaacaagc 2700 tagagagcag ctccattgaa atggttatcg ctaacaagaa catcatcttc gtcgctggac 2760 tcggtggcat tggattcgac accagtcgcg agattgtcaa gagcggccca aaggtaagag 2820 agtgcctgca taatagagcc taaaatgtaa cctgacgtgt tctccttaga acctggtcat 2880 ccttgaccgc attgagaacc cagccgctat tgccgagctg aaggcactca accccaaggt 2940 gaccgtcacg ttctatccct atgatgtaac cgtctcggta gcagagacca caaagctgct 3000 gaagaccatc ttcgacaagt tgaagacagt cgacctgctc atcaatggag ctggcatcct 3060 ggacgactac cagatcgagc gtaccattgc ggtgaacttc actggcacag tgaacaccac 3120 cacggccatc atgtccttct gggacaagcg caagggcggc ccaggcggta tcattgcgaa 3180 catctgctcg gtgactggct tcaatgccat ctaccaggtg cccgtgtact ccgcatccaa 3240 ggcagctgct ctcagcttca ccaattctct ggccgtaagt gaaagaccga ttagaagtga 3300 acatagatat cttatttgat ccctctatat agaaactggc gcccattact ggcgtgactg 3360 cctactccat caaccctggc atcacgaaga ccaccctggt ccacaagttc aactcatggc 3420 tggatgtgga gcctcgtgtg gccgagctgc tgctggagca tcccactcag acaactctgc 3480 agtgcgccca gaactttgtc aaggccattg aagccaacca gaatggcgct atctggaaac 3540 tggacttggg taccctggag gccattgaat ggaccaagca ctgggactcg catatctaag 3600 ctgttcaagt cgatatcggc taattgaaat acgattcacc caaatcaaca aaattttaaa 3660 ataattctca tataaggctg aaaacaaaaa ttattcaaat cattctaatg caataaaaac 3720 acaagcatat tttataaaat taagaaaaca aatatctcaa ttggataaca gaaataggcg 3780 tgaggtagct tagaatttaa tattattttc ttttctataa ggatcgatta catttttagc 3840 aatatccagt taaaagaaga aaattaacgt agctaacaaa attgattgaa ctttagctct 3900 atcaattttt gatatattgt atcataccta aacagttttc ttagctttca aatttgcaaa 3960 tttgttctat ttttacatca tgtatattta tatacttgga attataatag ctgtcatctt 4020 tctgtatcag ttacttttaa gtaatttatt taaattagat ctaggtgtag aaaagtgtct 4080 ggttttatag ttcgtgcgat caatttacgt acgtcaagtg atgagagaaa tgttcagtaa 4140 acgagtaaat agttgctata gtatacccta gttttagatg ccgcctgttg ctattgcctt 4200 acccgtactt aaatagctta ttctatgcaa actgaaaact ggtttccata agagacctat 4260 gggtaatcga ttatatgcag tgcgagtata tatgaacagc taagtgctaa gtgcctagca 4320 gtaacaggtt ggaaggaatt cgtttatgaa ttaattaata attagttgta tgaatatctc 4380 aattgtagct cttatatgtt ctcttctagt tatagccatt cacgcctctt acagtcttgc 4440 tgtctgtctg tcgggctact cattcgttcg ccgttattga agctagagaa gttttaaata 4500 tatacttcta gggaccttcg cctgataaac cgctcaaatt ttcccaatat attcactttg 4560 aatcgggaaa cactaaatct tttatctcca aaactctaaa gtattagact tgaaatttga 4620 ggtagattca gttttacagt ccagtgcaag tcctagttgt aaaacgggta cgggcattaa 4680 tgctaaaatc tataaatcga agattcttta taaattatat agaggtgtgg caaattttgg 4740 attcaaacaa atttgttttt atattttggc agctactggt gctaaaaaat tgacaatatg 4800 tagacaaaca ccattagtcg aaaaaggggg ctgggcaaat ataaattcta tactgaggtt 4860 ataagcataa aatttattga gcagctgtgc tgtgaagcgt ttttattgat acagaaacaa 4920 aatttgtaat tctttaaaaa ataccttgta ctttccacta tttgggaggc tttagttcga 4980 gaaatatcaa acaaatttaa tatatataat aaaaatgtcc tgagggcgtg gaaaaattgt 5040 tttttctttc caagttttac agttagaacc caaaaatctg aactgattgt acatgtatct 5100 ggcttgctaa ttaataggat agttaaatta ctaaatttgt ttcatttgat tttccctttc 5160 gaatgagtat tttagagtcg taacgcccga gatagttgtt ttattataaa taaatggcct 5220 cactgaagca gagcatctac acggcgtatc tgcgtagaat ttaatttaag atttgtacac 5280 gtaatcgtac gcgacgccag cgaacagacg aagacaaagt aaaacgaaca aatagtcatc 5340 ctgagtcgaa gtaaaacata tggaatacga gaaaccggca tgagttgcgt agaatttgaa 5400 aacaaaaaca ccgaaaattc tactcgaact ggcggcaaat gcgacgtcga cgaccgcgcg 5460 gccagtggta ttgataagac atgtcgcgtg ggcagcgtgg ccgtgtagct ataaatactg 5520 ggcacatggc tcagcagact catacggcaa tcagttttcg tctgagcagg tcacaaaaaa 5580 aagtccaaga aaatggccat cgctaacaag aacatcatct tcgtcgctgg actcggtggc 5640 attggattcg acaccagtcg cgagattgtc aagagcggcc caaaggtaag agagtgcctg 5700 cataatagag cctaaaatgt aacctgacgt gttctcctta gaacctggtc atccttgacc 5760 gcattgagaa cccagctgct attgccgagc tgaaggcact caacccaaat gtgaccgtca 5820 cgttctatcc ctatgatgta accgtcccgg tagcagagac cacgaagctt ttgcagaaaa 5880 tctttgacca gctgaagaca gtcgacctgc tcatcaatgg agctggcatc ctggacgact 5940 accagatcga gcgtaccatt gcggtgaact tcacaggcac ggtgaacacc accacggcca 6000 tcatgtcctt ctgggacaag cgcaagggcg gcccaggcgg tgtcattgcg aacatctgct 6060 cggtgactgg cttcaatgcc atctaccagg tgcccgtgta ctccgcatcc aaggcagctg 6120 ctctcagctc taccaattcc ctggccgtaa gtgataaacc aattgataag aggagtacag 6180 agactcaagt taatccctct atatagaaac tggcgcccat tactggcgtg actgcctact 6240 ccatcaaccc tggcatcacg aagacacctc tggtccacaa attcaactcg tggctggatg 6300 tggagcctcg tgtggccgag ttgctgctgg agcatcctac tcagacaagt ttgcagtgcg 6360 cccagaactt tgtcaaggcc attgaagcca accagaatgg cgccatctgg aaactggact 6420 tgggtaccct ggaggccatt gaatggacca agcactggga ctcgcatatc taaattattc 6480 aactcgcgag agccaggagc ctatggattc acgaaatcaa ttaaatttta aaataattcc 6540 cagataaggc tgaaaataaa tcattctaat gtaatatata tatatatatg atttttgagt 6600 gtatttaatt ttaaataaat caaacaaaat ctatgaaatt ttaaactgtc tatttcaatg 6660 ggttgagtga gtgtaatcta atctaaggct gtataaagat tcacgctgaa aaagggagcg 6720 agttctagcg acactgaaat ctaaacacat ggcaactcct ataaatataa aagaattc 6778 // |
|