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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X02662; SV 1; linear; genomic DNA; STD; PRO; 1523 BP.
XX
AC   X02662;
XX
DT   07-NOV-1985 (Rel. 07, Created)
DT   12-SEP-1993 (Rel. 36, Last updated, Version 8)
XX
DE   E. coli gap gene for GAPDH (glyceraldehyde-3-phosphate dehydrogenase)
XX
KW   dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase.
XX
OS   Escherichia coli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
XX
RN   [1]
RC   replaced by [2]
RP   1-1523
RX   DOI; 10.1111/j.1432-1033.1985.tb08988.x
RX   PUBMED; 2990926.
RA   Branlant G., Branlant C.;
RT   "Nucleotide sequence of the Escherichia coli gap gene. Different
RT   evolutionary behavior of the NAD+-binding domain and of the catalytic
RT   domain of D-glyceraldehyde-3-phosphate dehydrogenase";
RL   Eur. J. Biochem. 150(1):61-66(1985).
XX
RN   [2]
RP   1-1523
RA   Nelson K.;
RT   ;
RL   Submitted (18-SEP-1990) to the EMBL/GenBank/DDBJ databases.
RL   Nelson K., Research Associate, Institute of Molecular Evolutionary
RL   Genetics, 208 Mueller Labs, Penn State University, University Park, PA
RL   16802
XX
DR   GOA; P0A746.
DR   InterPro; IPR002579; Methionine_sulphoxide_MsrB.
DR   InterPro; IPR011057; Mss4-like.
DR   UniProtKB/Swiss-Prot; P0A746; MSRB_ECOLI.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1523
FT                   /organism="Escherichia coli"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:562"
FT   promoter        397..405
FT                   /note="pot. -35 region"
FT   promoter        411..417
FT                   /note="pot. -35 region"
FT   promoter        424..429
FT                   /note="pot. -10 region"
FT   promoter        435..440
FT                   /note="pot. -10 region"
FT   RBS             474..478
FT                   /note="put. Shine-Dalgarno region"
FT   CDS             484..1479
FT                   /transl_table=11
FT                   /note="put. GAPDH (aa 1-332)"
FT                   /db_xref="GOA:P0A9B2"
FT                   /db_xref="InterPro:IPR000173"
FT                   /db_xref="InterPro:IPR006424"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR020828"
FT                   /db_xref="InterPro:IPR020829"
FT                   /db_xref="InterPro:IPR020830"
FT                   /db_xref="InterPro:IPR020831"
FT                   /db_xref="InterPro:IPR020832"
FT                   /db_xref="PDB:1DC3"
FT                   /db_xref="PDB:1DC4"
FT                   /db_xref="PDB:1DC5"
FT                   /db_xref="PDB:1DC6"
FT                   /db_xref="PDB:1GAD"
FT                   /db_xref="PDB:1GAE"
FT                   /db_xref="PDB:1S7C"
FT                   /db_xref="PDB:2VYN"
FT                   /db_xref="PDB:2VYV"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A9B2"
FT                   /protein_id="CAA26498.1"
FT                   /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML
FT                   KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDE
FT                   TARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVIN
FT                   DNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPEL
FT                   NGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVS
FT                   TDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
XX
SQ   Sequence 1523 BP; 404 A; 381 C; 344 G; 394 T; 0 other;
     gatcaaacag tgatatacgc cgtcacgctt gttatgcagt aaacgacccg taaatggcgg        60
     ctctgtccca tgattctgcg tcacgtaaaa ctgcatctcg gacaaatttt ttttcagttc       120
     ttctgccgaa gtttattagc catttgctca catctcactt taatcgtgct cacattacgt       180
     gactgattct aacaaaacat taacaccaac tggcaaaatt ttgtcctaaa cttgatctcg       240
     acgaaatggc tgcacctaaa tcgtgatgaa aatcacattt ttatcgtaat tgccctttaa       300
     aattcggggc gccgacccca tgtggtctca agcccaaagg aagagtgagg cgagtcagtc       360
     gcgtaatgct taggcacagg attgatttgt cgcaatgatt gacacgattc gcttgacgct       420
     gcgtaaggtt tttgtaattt tacaggcaac cttttattca ctaacaaata gctggtggaa       480
     tatatgacta tcaaagtagg tatcaacggt tttggccgta tcggtcgcat tgttttccgt       540
     gctgctcaga aacgttctga catcgagatc gttgcaatca acgacctgtt agacgctgat       600
     tacatggcat acatgctgaa atatgactcc actcacggcc gtttcgacgg taccgttgaa       660
     gtgaaagacg gtcatctgat cgttaacggt aaaaaaatcc gtgttaccgc tgaacgtgat       720
     ccggctaacc tgaaatggga cgaagttggt gttgacgttg tcgctgaagc aactggtctg       780
     ttcctgactg acgaaactgc tcgtaaacac atcaccgctg gtgcgaagaa agtggttatg       840
     actggtccgt ctaaagacaa cactccgatg ttcgttaaag gcgctaactt cgacaaatat       900
     gctggccagg acatcgtttc caacgcttcc tgcaccacca actgcctggc tccgctggct       960
     aaagttatca acgataactt cggcatcatc gaaggtctga tgaccaccgt tcacgctact      1020
     accgctactc agaaaaccgt tgatggcccg tctcacaaag actggcgcgg cggccgcggc      1080
     gcttcccaga acatcatccc gtcctctacc ggtgctgcta aagctgtagg taaagtactg      1140
     ccagaactga atggcaaact gactggtatg gcgttccgcg ttccgacccc gaacgtatct      1200
     gtagttgacc tgaccgttcg tctggaaaaa gctgcaactt acgagcagat caaagctgcc      1260
     gttaaagctg ctgctgaagg cgaaatgaaa ggcgttctgg gctacaccga agatgacgta      1320
     gtatctaccg atttcaacgg cgaagtttgc acttccgtgt tcgatgctaa agctggtatc      1380
     gctctgaacg acaacttcgt gaaactggta tcctggtacg acaacgaaac cggttactcc      1440
     aacaaagttc tggacctgat cgctcacatc tccaaataag ttgagatgac actgtgatca      1500
     caccatcgtc acagccttcg atc                                              1523
//
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