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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   X00660; SV 1; linear; genomic DNA; STD; PRO; 1070 BP.
XX
AC   X00660;
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DT   07-NOV-1985 (Rel. 07, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 10)
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DE   Bacillus pumilus xynA gene for xylanase (EC 3.2.1.8)
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KW   signal peptide; xylanase.
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OS   Bacillus pumilus
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-335, 337-366, 368-614, 616-1070
RA   Fukusaki E., Panbangred W., Shinmyo A., Okada H.;
RT   "The complete nucleotide sequence of the xylanase gene (xynA) of Bacillus
RT   pumilus";
RL   FEBS Lett. 171:197-201(1984).
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RN   [2]
RP   1-1070
RA   Urabe I.;
RT   ;
RL   Submitted (07-FEB-1991) to the EMBL/GenBank/DDBJ databases.
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CC   Data kindly reviewed (25-JUL-1985) by H. OKADA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1070
FT                   /organism="Bacillus pumilus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1408"
FT   promoter        8..13
FT                   /note="pot. promoter structure"
FT   promoter        30..35
FT                   /note="pot. promoter structure"
FT   RBS             41..53
FT                   /note="pot. ribosome binding site"
FT   misc_signal     757..793
FT                   /note="stem-loop structure, transcription  terminator"
FT   old_sequence    335..337
FT                   /note="tct was tat in [1]"
FT                   /citation=[1]
FT   old_sequence    366..368
FT                   /note="agg was aag in [1]"
FT                   /citation=[1]
FT   old_sequence    614..616
FT                   /note="gtg was gcg in [1]"
FT                   /citation=[1]
FT   CDS             61..747
FT                   /transl_table=11
FT                   /gene="xynA"
FT                   /product="endo- 1,4-beta-xylanase"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:P00694"
FT                   /db_xref="HSSP:1F5J"
FT                   /db_xref="InterPro:IPR018208"
FT                   /db_xref="UniProtKB/Swiss-Prot:P00694"
FT                   /protein_id="CAA25278.1"
FT                   /translation="MNLRKLRLLFVMCIGLTLILTAVPAHARTITNNEMGNHSGYDYEL
FT                   WKDYGNTSMTLNNGGAFSAGWNNIGNALFRKGKKFDSTRTHHQLGNISINYNASFNPGG
FT                   NSYLCVYGWTQSPLAEYYIVDSWGTYRPTGAYKGSFYADGGTYDIYETTRVNQPSIIGI
FT                   ATFKQYWSVRQTKRTSGTVSVSAHFRKWESLGMPMGKMYETAFTVEGYQSSGSANVMTN
FT                   QLFIGN"
FT   sig_peptide     61..141
FT   mat_peptide     142..744
FT                   /gene="xynA"
FT                   /product="endo- 1,4-beta-xylanase"
FT                   /EC_number="3.2.1.8"
FT   mRNA            <61..>747
FT                   /gene="xynA"
FT   prim_transcript <61..>747
FT                   /gene="xynA"
XX
SQ   Sequence 1070 BP; 333 A; 225 C; 234 G; 278 T; 0 other;
     gaattcattt catcttagag atgacagaat taaaaggatg aaaaaggaga ggaatgacga        60
     atgaatttga gaaaattaag actgttgttt gtgatgtgta ttggactgac gcttatactg       120
     acggctgtac cagcccatgc gagaaccatt acgaataatg aaatgggtaa ccatagcggg       180
     tacgattatg aattatggaa ggattatgga aacacctcga tgacactcaa taacggcggg       240
     gcatttagtg caggctggaa caatatcgga aatgctttat ttagaaaagg gaaaaagttt       300
     gattccacta gaactcacca tcagcttggc aacatctcca tcaattacaa cgcaagtttt       360
     aacccaggcg ggaattccta tctatgtgtc tatggctgga cacaatctcc attagcagaa       420
     tactacattg ttgattcatg gggcacatat cgtccaacag gagcgtataa aggatcattt       480
     tatgctgatg gaggcacata tgacatttat gaaacaaccc gtgtcaatca gccttccatt       540
     atcgggatcg caaccttcaa gcaatattgg agtgtacgtc aaacgaaacg tacaagcgga       600
     acggtctccg tcagtgcgca ttttagaaaa tgggaaagct tagggatgcc aatggggaaa       660
     atgtatgaaa cggcatttac tgtagaaggc taccaaagca gcggaagtgc aaatgtgatg       720
     accaatcagc tgtttattgg caactaaaaa agtcaaagaa aagagccggg agcaaaactc       780
     ctggcttttt ctatcataat ttttcaactt cgactctgcc gggaaagaac gttccggaaa       840
     agaacgtcgc accgccgccc atatctgcca agcgatcagg tgtgaggcca ttcaccaaat       900
     gttttttgcc ttttttggtc tgcccataat cctggctgac aacaacacca gataacacat       960
     tttgtccgac tgacacgatc agctcgcatt ctcctcgatg attcagcaca cgaaccatgt      1020
     ccccatcttc aatctgtctt tcttttgcat cttgttcatt catatgaggc                 1070
//
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