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EBI Dbfetch

ID   U83180; SV 1; linear; genomic DNA; STD; INV; 2620 BP.
XX
AC   U83180;
XX
DT   20-FEB-1998 (Rel. 54, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Trypanosoma rangeli sialidase precursor gene, complete cds.
XX
KW   .
XX
OS   Trypanosoma rangeli
OC   Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma.
XX
RN   [1]
RP   1-2620
RX   DOI; 10.1093/glycob/7.8.1167
RX   PUBMED; 9455917.
RA   Buschiazzo A., Campetella O., Frasch A.C.;
RT   "Trypanosoma rangeli sialidase: cloning, expression and similarity to T.
RT   cruzi trans-sialidase";
RL   Glycobiology 7(8):1167-1173(1997).
XX
RN   [2]
RP   1-2620
RA   Buschiazzo A.;
RT   ;
RL   Submitted (23-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL   Inst. de Inv. Bioquimicas, Fundacion Campomar, Av. Patricias Argentinas
RL   435, Buenos Aires, C.F. 1405, Argentina
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2620
FT                   /organism="Trypanosoma rangeli"
FT                   /strain="LDG"
FT                   /mol_type="genomic DNA"
FT                   /clone="TrSA4"
FT                   /db_xref="taxon:5698"
FT   sig_peptide     332..397
FT   CDS             332..2314
FT                   /codon_start=1
FT                   /product="sialidase precursor"
FT                   /EC_number="3.2.1.18"
FT                   /note="secreted alpha 2-3 sialidase precursor; similar to
FT                   Trypanosoma cruzi trans-sialidase encoded by GenBank
FT                   Accession Number L38463"
FT                   /db_xref="GOA:O44049"
FT                   /db_xref="InterPro:IPR008377"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="PDB:1MZ5"
FT                   /db_xref="PDB:1MZ6"
FT                   /db_xref="PDB:1N1S"
FT                   /db_xref="PDB:1N1T"
FT                   /db_xref="PDB:1N1V"
FT                   /db_xref="PDB:1N1Y"
FT                   /db_xref="PDB:1WCS"
FT                   /db_xref="PDB:2A75"
FT                   /db_xref="PDB:2AGS"
FT                   /db_xref="PDB:2FHR"
FT                   /db_xref="UniProtKB/TrEMBL:O44049"
FT                   /protein_id="AAC95493.1"
FT                   /translation="MSWLAVFVPLFLMACASEPASALAPGSSRVELFKRKNSTVPFEES
FT                   NGTIRERVVHSFRIPTIVNVDGVMVATADARYETSFDNSFIETAVKYSVDDGATWNTQI
FT                   AIKNSRASSVSRVMDATVIVKGNKLYILVGSFNKTRNSWTQHRDGSDWEPLLVVGEVTK
FT                   SAANGKTTATISWGKPVSLKPLFPAEFDGILTKEFIGGVGAAIVGSNGNLVYPVQIADM
FT                   GGRVFTKIMYSEDDGNTWKFAEGRSKFGCSEPAVLEWEGKLIINNRVDGNRRLVYESSD
FT                   MGKTWVEALGTLSHVWTNSPTSNQQDCQSSFVAVTIEGKRVMLFTHPLNLKGRWMRDRL
FT                   HLWMTDNQRIFDVGQISIGDENSGYSSVLYKDDKLYSLHEINTNDVYSLVFVRFIGELQ
FT                   LMKSVVRTWKEEDNHLASICTPVVPATPPSKGGCGAAVPTAGLVGFLSHSANGSVWEDV
FT                   YRCVDANVANAERVPNGLKFNGVGGGAVWPVARQGQTRRYQFANYRFTLVATVTIDELP
FT                   KGTSPLLGAGLEGPGDAKLLGLSYDKNRQWRPLYGAAPASPTGSWELHKKYHVVLTMAD
FT                   RQGSVYVDGQPLAGSGNTVVRGATLPDISHFYIGGPRSKGAPTDSRVTVTNIVLYNRRL
FT                   NSSEIRTLFLSQDMIGTDGGAGTAA"
FT   mat_peptide     398..2311
FT                   /product="sialidase"
FT                   /EC_number="3.2.1.18"
FT                   /note="secreted alpha 2-3 sialidase"
XX
SQ   Sequence 2620 BP; 527 A; 692 C; 801 G; 600 T; 0 other;
     ggtgtgcttc aagaacgata aggtggtgga agaaggagag aaggtgatcc cttttttttt        60
     gtgagggccc catatacggc cctaaggtgg tggcatgctg ccggagtcat gtgctgtctt       120
     gcacgggcgg ttcccactgc tctggaactg ccgcagtttg tgtgttacct ccttcttttc       180
     ccgctgcctc tgcaattgct ccccctgcca aaagacagcc ctgcctataa taattttttt       240
     ctaaacgtaa taatacatcg cgaaccaccg ctcacagaac acaccggcaa gtaccaccca       300
     ctgcggaaca gagagtcgtc aggacaatag gatgtcctgg ctagcggttt tcgtgccgct       360
     tttcctcatg gcctgcgcca gcgagcccgc cagcgccttg gcgcccggct caagccgagt       420
     tgaactgttt aagcggaaga attccacggt gccatttgag gagagtaatg gcacgatcag       480
     ggagcgggta gttcactcgt tccgcattcc caccattgtc aacgtggatg gggtgatggt       540
     tgccactgcg gatgcccgct acgaaacatc cttcgacaat tccttcattg agactgccgt       600
     caagtacagc gtggacgatg gggcgacatg gaacacccaa attgcgatca agaacagccg       660
     cgcctcgtcc gtttcccgtg tgatggacgc cacagtgatc gtgaagggga acaagctgta       720
     catcctggtg ggaagcttca ataagacacg aaactcgtgg acgcagcacc gtgatgggag       780
     cgactgggaa ccgcttctcg tcgttggtga ggtcacgaag tccgctgcga acggcaagac       840
     aaccgcaact atcagttggg ggaagcctgt gtctctgaag ccattgtttc cggcggagtt       900
     tgatgggatc ctcacgaagg agttcattgg cggtgtgggg gctgccatcg tggggtccaa       960
     tgggaacctt gtgtaccctg tgcaaattgc ggacatgggg gggcgagtct tcaccaagat      1020
     catgtactca gaggacgatg gcaacacgtg gaagtttgcg gagggcagga gcaagtttgg      1080
     ctgctctgaa ccggcagtcc tcgagtggga ggggaaactc atcataaaca atcgtgttga      1140
     tgggaaccgt cgcttggtct acgaatcgag cgacatggga aagacgtggg tggaggctct      1200
     cggcacactc tctcacgtgt ggaccaactc accaacatcg aaccagcagg actgtcagag      1260
     cagcttcgtt gctgtgacga tcgaagggaa gcgtgtgatg ctcttcaccc acccgctgaa      1320
     cctcaagggg aggtggatgc gcgaccgcct gcacctttgg atgacggaca atcagcgcat      1380
     ctttgacgtt gggcagatat ccattggcga tgaaaattcc ggttacagct ccgtcctgta      1440
     caaggatgat aagctgtatt ctctgcacga gatcaacacc aacgacgtgt acagccttgt      1500
     ctttgtgcgc ttcattggcg agctgcagct catgaagtcc gtggtgcgga cctggaagga      1560
     ggaggacaac cacctcgcca gcatttgcac ccctgttgtt cccgccactc cgccgtcaaa      1620
     gggcggctgt ggcgctgctg ttcccactgc aggccttgtt ggctttttgt ctcacagtgc      1680
     caacgggagc gtctgggagg acgtgtaccg ctgcgtcgac gcaaacgtgg ccaatgcgga      1740
     gagggttccc aacggtttga agttcaatgg ggtcggtgga ggggcggttt ggccggtggc      1800
     tcggcagggg cagacccgac ggtaccagtt cgcaaactac cggttcacgc tggtggcgac      1860
     ggtgacgatt gacgagcttc cgaaggggac gagtcctttg ctgggggcgg gtctggaagg      1920
     ccccggcgac gccaagctcc tggggctgtc gtacgacaag aatcgccagt ggcgaccact      1980
     gtacggagcg gcgccggcgt cgccgacagg atcatgggaa ctgcacaaga agtaccacgt      2040
     ggttctcacg atggcggaca ggcagggctc tgtgtacgtt gatggccagc ctctggcggg      2100
     ttcggggaat accgtcgtgc ggggcgcgac attgcccgac atttcccact tctatattgg      2160
     cgggcctcgg agtaagggtg cgcccacgga cagccgcgtg acggtgacca acattgttct      2220
     ctacaaccgt cggctgaact ccagcgaaat caggactctg ttcttgagcc aagacatgat      2280
     tggcacggat ggcggcgctg gcactgccgc ttagagcttt gaagctggga cccctgctga      2340
     cagcgccgcg tcgtccgcgc ctgccgatgg gaggggcctt gcgcacgtgt ttgcccttgt      2400
     gccgcttccg cttgtccctg gttgttctcg gatgatctgg tgagagggac gcgcacctgt      2460
     gtggacgcga tttggatctt gagctggatc ctctccgccg ccctctaacc ctccggcgca      2520
     ggcctacgct tcgggcgttg atgcaatatt ttttttattt tgttttgaat cttatttgtt      2580
     ttcttttttt gttttgcttt ggaagaaatt attaattttt                            2620
//


  
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