spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U76545; SV 1; linear; genomic DNA; STD; PRO; 1190 BP.
XX
AC   U76545;
XX
DT   19-NOV-1996 (Rel. 49, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Dictyoglomus thermophilum beta-1,4-xylanase 229B (xynB) gene, complete cds.
XX
KW   .
XX
OS   Dictyoglomus thermophilum
OC   Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.
XX
RN   [1]
RP   1-1190
RX   PUBMED; 9572948.
RA   Morris D.D., Gibbs M.D., Chin C.W., Koh M.H., Wong K.K., Allison R.W.,
RA   Nelson P.J., Bergquist P.L.;
RT   "Cloning of the xynB gene from Dictyoglomus thermophilum Rt46B.1 and action
RT   of the gene product on kraft pulp";
RL   Appl. Environ. Microbiol. 64(5):1759-1765(1998).
XX
RN   [2]
RP   1-1190
RA   Morris D.D., Gibbs M.D., Bergquist P.L.;
RT   ;
RL   Submitted (28-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   SBS, Auckland University, 3A Symonds Street, Auckland, New Zealand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1190
FT                   /organism="Dictyoglomus thermophilum"
FT                   /strain="Rt46B.1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:14"
FT   CDS             67..1149
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynB"
FT                   /product="beta-1,4-xylanase 229B"
FT                   /EC_number="3.2.1.8"
FT                   /note="family 11 xylanase"
FT                   /db_xref="GOA:P77853"
FT                   /db_xref="InterPro:IPR001137"
FT                   /db_xref="InterPro:IPR005084"
FT                   /db_xref="InterPro:IPR008979"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR013319"
FT                   /db_xref="InterPro:IPR018208"
FT                   /db_xref="PDB:1F5J"
FT                   /db_xref="UniProtKB/TrEMBL:P77853"
FT                   /protein_id="AAC46361.1"
FT                   /translation="MFLKKLSKLLLVVLLVAVYTQVNAQTSITLTSNASGTFDGYYYEL
FT                   WKDTGNTTMTVYTQGRFSCQWSNINNALFRTGKKYNQNWQSLGTIRITYSATYNPNGNS
FT                   YLCIYGWSTNPLVEFYIVESWGNWRPPGATSLGQVTIDGGTYDIYRTTRVNQPSIVGTA
FT                   TFDQYWSVRTSKRTSGTVTVTDHFRAWANRGLNLGTIDQITLCVEGYQSSGSANITQNT
FT                   FSQGSSSGSSGGSSGSTTTTRIECENMSLSGPYVSRITNPFNGIALYANGDTARATVNF
FT                   PASRNYNFRLRGCGNNNNLARVDLRIDGRTVGTFYYQGTYPWEAPIDNVYVSAGSHTVE
FT                   ITVTADNGTWDVYADYLVIQ"
XX
SQ   Sequence 1190 BP; 386 A; 197 C; 277 G; 330 T; 0 other;
     aaagatgacc ccgaagaggc tatgtagccg ttaaggggaa aattaaagta aagcggggtg        60
     tgtaaaatgt ttcttaaaaa acttagtaag ttgctcttag tcgtactact tgtcgcagtg       120
     tatacgcaag ttaatgctca aacgtctata acactaacaa gtaatgcaag cggtactttt       180
     gatggctact actatgaact atggaaagat acagggaata caaccatgac tgtatacaca       240
     caaggaaggt ttagctgtca gtggagcaat ataaacaatg cattattcag aacaggtaag       300
     aagtacaacc aaaactggca gtcattaggc actattagaa tcacctactc agccacatat       360
     aatcctaatg gtaactccta cttatgtatc tatggttggt ctactaatcc tttagtagag       420
     ttttacattg tagaaagttg gggtaattgg cgtccaccag gtgcaacctc tcttggacag       480
     gttactatcg acggtggtac ctatgacatt tacagaacta cccgtgtaaa tcagccatct       540
     attgtcggta cagctacttt tgatcaatat tggagtgtaa ggacatctaa gagaacaagt       600
     ggaacagtca ctgtaacaga tcactttagg gcatgggcaa atagaggttt aaaccttggt       660
     actattgatc aaattactct ttgtgttgaa ggatatcaaa gcagtggttc ggctaatata       720
     acacaaaata ctttttctca aggtagcagt agtggaagta gtgggggcag tagtggtagt       780
     acaacaacta ctagaataga atgtgaaaac atgtcattaa gtgggcccta tgtatcaaga       840
     attacaaatc catttaatgg tatagctctt tatgcaaatg gagatactgc aagagctaca       900
     gtaaacttcc cagcaagtcg taactataat ttcaggttaa gaggatgcgg aaataacaat       960
     aatttagctc gggttgattt acgaatagat gggaggactg taggtacgtt ctattatcag      1020
     ggaacatatc cttgggaggc tcctatagac aatgtatacg tgagtgcagg ttctcataca      1080
     gtggaaatta cagttacggc tgataatggg acatgggatg tttatgcaga ttatctggtg      1140
     atacagtaag gagggggaag tttaggagct gggaggactt ggctctcagc                 1190
//
spacer
spacer