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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U75414; SV 1; linear; genomic DNA; STD; PRO; 1398 BP.
XX
AC   U75414;
XX
DT   01-NOV-1996 (Rel. 49, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 9)
XX
DE   Pseudomonas syringae pv. lachrymans pectate lyase P (pelP) gene, complete
DE   cds.
XX
KW   .
XX
OS   Pseudomonas syringae pv. lachrymans
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.
XX
RN   [1]
RP   1-1398
RX   DOI; 10.1094/MPMI.1997.10.3.369
RX   PUBMED; 9100381.
RA   Bauer D.W., Collmer A.;
RT   "Molecular cloning, characterization, and mutagenesis of a pel gene from
RT   Pseudomonas syringae pv. lachyrmans encoding a member of the Erwinia
RT   chrysanthemi pelADE family of pectate lyases";
RL   Mol. Plant Microbe Interact. 10(3):369-379(1997).
XX
RN   [2]
RP   1-1398
RA   Bauer D.W., Collmer A.;
RT   ;
RL   Submitted (18-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY
RL   14853, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1398
FT                   /organism="Pseudomonas syringae pv. lachrymans"
FT                   /strain="859"
FT                   /mol_type="genomic DNA"
FT                   /note="pathovar: lachrymans"
FT                   /db_xref="taxon:53707"
FT   promoter        66..82
FT                   /gene="pelP"
FT                   /note="RpoN-dependent promoter"
FT   RBS             112..115
FT                   /gene="pelP"
FT   CDS             125..1264
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pelP"
FT                   /product="pectate lyase P"
FT                   /note="PelP"
FT                   /db_xref="GOA:P72242"
FT                   /db_xref="InterPro:IPR002022"
FT                   /db_xref="InterPro:IPR006626"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:P72242"
FT                   /protein_id="AAB17879.1"
FT                   /translation="MLKPHGLTPLALTGGILVSLLSVSLSAHAEIATDVATTGWATQNG
FT                   GTKGGSRAAANNIYTVKNAAELKAALAASGGSNGRIIKERGVIDVSDGKPYTKTSDMKQ
FT                   RARLDIPGKTTIVGTSSSAEIREGFFYAKENDVIIRNLTIENPWDPEPVWDPEDGSAGN
FT                   WNSEYDGLTVEGASNVWIDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKNGANYVTI
FT                   SYSVFRNHEKNNLIGSSDSKTPDDGKLKVTNHNSLFENISSRGPRVRVGQVHLYNNHHI
FT                   GSTTHKVYPCVYAQGVGKGSKIFSERNVLDISGISGCSKVAADYGGSVYRDSGSLVNGS
FT                   VISCSWSTSIGWTPPYSYTPLAADKVAADVKAKAGAGKI"
FT   terminator      1284..1315
FT                   /gene="pelP"
XX
SQ   Sequence 1398 BP; 354 A; 369 C; 379 G; 296 T; 0 other;
     gactatattc aatcaacagc aaacattctg tttgcgctac tgccttggca acaggatgtt        60
     tgctgtggga tacgcagttg caataactgc acgttgtaca cacattaatc aaggaataga       120
     ttatatgttg aagcctcatg gtttaacgcc gctcgcattg acgggcggca ttcttgtatc       180
     gctattgtct gtcagcctgt ctgcccacgc cgaaatcgcc accgatgttg ccactaccgg       240
     ttgggctact caaaacgggg gcaccaaggg tggttcgagg gcagcagcga ataacattta       300
     tacggtgaaa aacgccgccg agctgaaagc cgcactggct gcgtctggag gcagcaacgg       360
     ccggatcatc aaggagagag gggttattga tgtcagcgac ggcaaaccgt acaccaaaac       420
     ctctgatatg aagcagcgcg cccgcctgga catccccggc aaaaccacga ttgtcggcac       480
     ctccagcagt gccgagataa gggaagggtt tttctacgcc aaggaaaacg acgtcatcat       540
     tcgcaacctg accattgaaa acccctggga cccggaaccg gtctgggacc cggaagatgg       600
     cagcgccggc aactggaact cggagtacga cggtctgacg gtcgaaggtg ccagcaatgt       660
     atggatagat catgtgacgt ttaccgacgg ccgtcgtacc gatgatcaga atggcacggc       720
     caatggtcgc ccaaaacaac accatgatgg cgcactggac gtcaagaacg gcgccaacta       780
     tgtcaccatc tcgtattccg tgttccggaa tcacgaaaag aataacctga tcggttcaag       840
     tgacagtaaa acacccgatg acggcaaact gaaggtgacc aatcacaact cgttgttcga       900
     gaatatttcc tctcgcgggc cgcgtgtgcg ggttggtcag gttcatcttt acaacaatca       960
     ccacattgga agtaccaccc ataaggtcta cccgtgtgtg tatgcccagg gcgtcggtaa      1020
     aggttcgaaa atcttctctg aacgcaatgt gctcgatatc agcggcatca gtggttgcag      1080
     caaggttgcg gccgactatg gcggcagtgt ctaccgtgat agcgggtcgc tggtaaacgg      1140
     cagcgtcatc agctgttcct ggagcaccag tattggctgg acccctccgt atagctacac      1200
     ccctctggcg gctgacaagg ttgcggccga cgtcaaggcc aaggccggcg ctggcaaaat      1260
     ctgatacgcc ggttgtacag gacgataaaa gaccctctca atgagggtct tttattgagc      1320
     aggttatcgc cggacgaaga gtcagccttc atcaggatcg cacccctcaa ttgaccagtt      1380
     gattgatttc gatgatcg                                                    1398
//
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