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EBI DbfetchID U74302; SV 1; linear; genomic DNA; STD; PRO; 3300 BP. XX AC U74302; XX DT 19-NOV-1996 (Rel. 49, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Erwinia carotovora oxidative stress transcriptional regulator (oxyR) and DE 5,10-methylenetetrahydrofolate reductase (metF) genes, complete cds and DE unknown dehydrogenase (udhA) gene, partial cds. XX KW . XX OS Pectobacterium carotovorum OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pectobacterium. XX RN [1] RP 1-3300 RX DOI; 10.1111/j.1574-6968.1998.tb13242.x RX PUBMED; 9809430. RA Calcutt M.J., Lewis M.S., Eisenstark A.; RT "The oxyR gene from Erwinia carotovora: cloning, sequence analysis and RT expression in Escherichia coli"; RL FEMS Microbiol. Lett. 167(2):295-301(1998). XX RN [2] RP 1-3300 RA Calcutt M.J., Lewis M.S., Eisenstark A.; RT ; RL Submitted (14-OCT-1996) to the EMBL/GenBank/DDBJ databases. RL Molecular Genetics, Cancer Research Center, 3501, Berrywood Drive, RL Columbia, MO 65201, USA XX FH Key Location/Qualifiers FH FT source 1..3300 FT /organism="Pectobacterium carotovorum" FT /strain="Ecc71" FT /mol_type="genomic DNA" FT /db_xref="taxon:554" FT CDS <1..454 FT /codon_start=2 FT /transl_table=11 FT /gene="udhA" FT /product="unknown dehydrogenase" FT /note="similar to udhA from E. coli" FT /db_xref="GOA:P71317" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR016156" FT /db_xref="UniProtKB/Swiss-Prot:P71317" FT /protein_id="AAC72240.1" FT /translation="SLASAAYDQGRLAAQAIIKGDASAHLIEDIPTGIYTIPEISSVGK FT TEQELTAMKVPYEVGRAQFKHLARAQIVGMNVGSLKILFHRETKQILGIHCFGERAAEI FT IHIGQAIMEQKGEGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF" FT CDS complement(446..1354) FT /codon_start=1 FT /transl_table=11 FT /gene="oxyR" FT /product="oxidative stress transcriptional regulator" FT /note="transcriptional activator; hydrogen peroxide FT inducible transcriptional activator" FT /db_xref="GOA:P71318" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P71318" FT /protein_id="AAC72241.1" FT /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGV FT MLLERTSRKVLFTQAGLLLVEQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPY FT LLPQIIPMLHRTFPKLEMYLHEAQTHQLLAQLDSGKLDCAILAMVKESEAFIEVPLFDE FT PMKLAIYQDHPWANRERVAMSDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRAT FT SLETLRNMVAAGSGITLLPALSVPRERERDGVCYLPCYKPEPKRTIALVYRPGSPLRGR FT YEQLADTIREHMQGYMETLSK" FT CDS complement(1985..2881) FT /codon_start=1 FT /transl_table=11 FT /gene="metF" FT /product="5,10-methylenetetrahydrofolate reductase" FT /db_xref="GOA:P71319" FT /db_xref="InterPro:IPR003171" FT /db_xref="InterPro:IPR004620" FT /db_xref="UniProtKB/Swiss-Prot:P71319" FT /protein_id="AAC72242.1" FT /translation="MSFFHANQREALNQSLAELQGRINVSFEFFPPRTSDMEETLWSSI FT DRLSSLKPKFVSVTYGANSGERDRTHSIIKTIKERTGLEAAPHLTCIDASREQLREIAQ FT DYWESGIRHIVALRGDLPQEGGKPDMYAADLVSLLKEVGDFDISVAAYPEVHPEAKSAQ FT ADLINLKHKIDAGANRAITQFFFDVESYLRFRDRCVATGIDVEIVPGILPVSNFKQLQK FT FATMTNVRVPNWMTTMFDGLDNDPETRKMVGASIAMDMVKILSREGVKDFHFYTLNRAE FT LSYAICHTLGVRPDVAR" XX SQ Sequence 3300 BP; 792 A; 878 C; 842 G; 788 T; 0 other; aagcttggca tcggcggcgt acgatcaggg taggcttgcc gcacaggcga ttatcaaagg 60 cgatgccagc gcgcatctaa tcgaagatat cccgaccggt atttatacca tcccggaaat 120 cagctccgtg gggaaaaccg agcaagagct caccgcgatg aaagtgcctt acgaagtcgg 180 gcgggcacag tttaaacatc tggcacgggc gcagattgtt gggatgaatg tggggagttt 240 aaagattctg tttcaccgcg aaacgaaaca gattctgggt attcattgct ttggtgagcg 300 cgccgctgag attatccaca tcgggcaggc catcatggaa cagaaaggtg aaggtaatac 360 tatcgaatat ttcgttaata ccaccttcaa ctatccaacc atggcagaag cgtaccgcgt 420 agcggcgcta aacgggctta accgcttatt ttgacagggt ttccatatag ccctgcatat 480 gctcgcggat ggtatcagca agttgctcat agcgtccgcg cagcggtgaa ccggggcggt 540 acaccagcgc gatagtgcgc ttgggctccg gtttatagca cggcaaatag cagacgccat 600 cgcgttcgcg ttcgcgcgga acagacaatg ctggcagcag cgtaataccg cttccggctg 660 cgaccatgtt gcgcagcgtc tccagactgg tcgcccggaa atgcgtatct tcatccgccc 720 ccgcctgaaa acagaagccc atcgcctgat cgcgcaggca gtggccgtct tccagcatca 780 acagtttttc gcccgccaga tcggacattg ccacgcgttc gcggttcgcc caagggtgat 840 cctgataaat cgccagcttc atcggctcgt caaacagagg aacttcgata aaggcttcgg 900 actctttcac catcgccaga atggcgcagt ccagtttgcc gctgtccaac tgggccagca 960 gttgatgggt ttgcgcttcg tgcaggtaca tttcgagttt ggggaacgtg cgatgcagca 1020 tcggaatgat ttgcggcagc agataaggcc ctacagtggg gatcaggccg atatgcagtg 1080 gcccagacat ggtttcgccc tgctggctcg ccatctcttt taatactttg acctcgcgta 1140 ataccgttcg tgcctgctct accagcagca gcccagcctg cgtaaacaag accttgcgac 1200 tggttcgttc cagcagcatc acgccgagtt catcttccag tttacgaatc tgtccactga 1260 gtgttggctg actcacatgg caggaatctg ccgcacgccg aaagtgacga tgttctgcca 1320 gcgcgacaag atactctaag tcccgaatat tcattattat tctccttatc atgatagcta 1380 acagcgatag ataggatatc aatgaacgat aatccctatc aacatccaaa atgaataata 1440 tatcccacca aagcgtatct atttatttct acaggaataa aacaatattt ttacgatttc 1500 ggtaccacgg gtatacctac tgggcttcag ccacgctata acaagcagac taacctcttc 1560 aagcgatttg gcagcgacag cattttgtgt gtgtcggcca acgatactcc ggcggtcgac 1620 gccgggaaat ctgaccagca ggcaaagcca ttaacggtgg gaataggcgg agagaaatgg 1680 aggattcgaa tagtcaggga aatggtcata acgccgccga gcggtcatcg tactgttatg 1740 agtgatagaa acgattattt atagagacta ctagcgataa aaacgggata agagataaaa 1800 acaggcgctg gggataatca ttgaatcggt cagtagcaat cggtctaacc gcgtgaatag 1860 gaatctcatc cctgagactc ctccttttca gagccgccgt aagtgacgtt gaaaggcatt 1920 ccaataccgt tactcttcgt caccgcgttg cggcctcttt cttcctgaaa tcttgcgcgt 1980 cgcctcagcg tgctacatca gggcggacgc ccagcgtatg gcaaatcgca tagctcagct 2040 ccgcgcggtt cagcgtatag aaatggaaat cttttacgcc ttcgcggctg agaattttca 2100 ccatatccat ggcgatagac gcccccacca ttttgcgggt ttctggatcg ttatccaggc 2160 cgtcaaacat ggtcgtcatc cagttcggca cacggacgtt ggtcatcgtg gcaaatttct 2220 gcaactgttt gaagttcgat actggcagaa tgcccggcac aatttctaca tcgatgcccg 2280 ttgccacgca gcggtcacgg aaccgcaaat agctttctac gtcgaaaaag aactgtgtga 2340 tagcgcgatt cgcgccggca tcaatcttgt gtttcaggtt aatcaggtca gcctgcgcgc 2400 ttttcgcttc agggtgtact tcaggatagg cggcaacgga aatatcgaaa tcaccgacct 2460 ctttcagcag ggaaaccaga tccgccgcgt acatgtccgg tttgccgcct tcttgaggca 2520 agtcgccgcg cagcgcgaca atatggcgga taccactctc ccagtaatcc tgagcgattt 2580 cacgcagctg ttcgcgtgaa gcatcgatgc aggtcaggtg aggtgccgct tccagaccgg 2640 tacgctcttt aatcgttttg ataatgctgt gagtacggtc acgctcgcca gaattcgccc 2700 cgtaagtcac ggaaacaaac ttgggcttca ggctgctcag tcgatcgata gagctccaca 2760 gggtttcttc catatcgctg gtacgtggcg ggaaaaattc aaatgacaca ttaattcgtc 2820 cctgcaattc cgccagactt tgattcagcg cttcccgctg gtttgcgtga aaaaagctca 2880 tacctgctac cccgttgacc gtgactgtta ttatcattcg atacacgtct atacgtttag 2940 acgtctatat agaaaatgac gtaatccgct taaagagtca acgtttttca gcacgataag 3000 ccgtgatgat tgctcacggt aaatgaaaaa agttcatgat gggtttccag caaaagtgct 3060 gcctcttcgt cacattgtta tgtagatgcg gagacggttt cgtgcgtcac aatattgcta 3120 ttccatgcta cttcgtcgca cacgcccgac acggggcggc tcagacgccg ctcgccccgt 3180 gaccccaggc tttcggcgga aattatgccg ctgacgcggt gccttcgtcg gtatctggct 3240 ttacggaccg cttgcgacac gttcccgacg tggcgcaagc tctcgccgcg tcctgcggct 3300 // |
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