 |
|
EBI DbfetchID U68242; SV 1; linear; genomic DNA; STD; PRO; 5409 BP. XX AC U68242; XX DT 01-OCT-1996 (Rel. 49, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Bartonella bacilliformis ABC transporter (txpA) gene, partial cds, and DE alanine tRNA synthetase (alaS) gene, complete cds. XX KW . XX OS Bartonella bacilliformis OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; OC Bartonella. XX RN [1] RP 1-5409 RA Upeslacis E., Ihler, G M.; RT ; RL Submitted (28-AUG-1996) to the EMBL/GenBank/DDBJ databases. RL Medical Biochemistry and Genetics, Texas A&M University, 440 Reynolds RL Building, College Station, TX 77843-1114, USA XX FH Key Location/Qualifiers FH FT source 1..5409 FT /organism="Bartonella bacilliformis" FT /mol_type="genomic DNA" FT /db_xref="taxon:774" FT CDS complement(<1..>664) FT /codon_start=1 FT /transl_table=11 FT /note="orfEU5; uncharacterized orf upstream of txpA similar FT to H. influenzae HI0412" FT /db_xref="GOA:P70863" FT /db_xref="HSSP:1PRZ" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:P70863" FT /protein_id="AAB09035.1" FT /translation="RDNVYLKKCSFVLIKDNKTKLLVKYLGNTVTVMVNIKIKNVEEDE FT NGMRLDRWFKVHYPGLGFGYLQKILRSGQVRVDGGRVKANMRLVTGQSIRVPSFFIESK FT RNISITSKVISQQDDGDLLKKMLLYEDPKIFVFNKPAGLAVQGGSGLTRHVDGMLEAWR FT NKKGEKPRLVHRLDRETSGLLVVARSXXAAQALTAAFRTREMKKIYWALVRRXPXKKQ" FT gene 628..2553 FT /gene="txpA" FT CDS <628..2553 FT /codon_start=1 FT /transl_table=11 FT /gene="txpA" FT /product="TxpA" FT /note="putative ABC transporter similar to Agrobacter FT tumefaciens chvA glucan exporter; ABC transporter" FT /db_xref="GOA:P70864" FT /db_xref="HSSP:2GHI" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005896" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017902" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/Swiss-Prot:P70864" FT /protein_id="AAB09036.1" FT /translation="VQNYISLNKHYHVTLQSVFKIAFPYCINSISSDIYSALVQFGDYY FT PVSLFRTYVRVLSYLNQEKNAFLLICTANITLAIITIAEPILFGHVIDTIADKSDTLVT FT LAVWMCFGISNIIAYVLVARGADRLAHRCRLTVLEKSFARIISMPLIWHQQRGTSHALH FT TLLRATDSMSSIWLEFMRQHLSTFVALFVLVPVTFKMNWRLSIVLMVLAILYILIARLV FT MQKTKNGQAAVEHYHHNLFKHITDSISNVSIVQSYNRITEETSALHQHTNNLLSAQTPV FT LNWWALASGLNRMASTISIVCVLLLGAFFVIKGQLSVGEVVTFVGFSQLMIGRLDQISG FT FINLAVSSQAKLQEFFDMEDSTFQTNEPANLPSLPNVKGAIQFHHVTYEFPNSSQGVFD FT ISFEVKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGYISIDGININSINRESLRKALA FT TVFQDAGLFDRTIRDNISIGKTGATDEELYEATKTASAHDFILKKSKNYDTLVGERGSQ FT LSGGERQRLAIARAILKNAPILILDEATSALDVETEIRVKNAIDCISQNRTTFIIAHRL FT STIRNADLVLFLDQGRLIEKGSFQELINKDGHFYKLLKRGGLTINQPATKEKDDNIIPL FT RKAMAL" FT gene complement(2652..5312) FT /gene="alaS" FT CDS complement(2652..5312) FT /codon_start=1 FT /transl_table=11 FT /gene="alaS" FT /product="AlaS" FT /note="class II alanine tRNA synthetase; alanine tRNA FT synthetase" FT /db_xref="GOA:P70865" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="UniProtKB/Swiss-Prot:P70865" FT /protein_id="AAB09037.1" FT /translation="MNSVNNIRSTFLDYFHRNGHEVLSSSPLVPRNDPTLMFTNAGMVD FT FKNVFTGLEKHSYNRATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFSNYFKE FT EAIFYAWNLLTKEFCLSKDKLLVTVYHDDDVAAGLWRKISGLSEEKIIRIATNDNFWMM FT GDTGPCGPCSEIFYDHGDKIWGGPPGSADEDGDRFIEIWNLVFMQYEQLSKEKRIELPQ FT PSIDTGMGLERIAAVLQGVHDNYDIDLFRTLIHASQEIIGVKATGDFFASHRVIADHLR FT SSAFLIADGIMPSNEGRGYVLRRIMRRAMRHAHLLGSKDLLMWRLVPVLISEMGQAYPE FT LVRAESLISEILKLEETRFRKTLERGLGLLNEASTHLEEGDYFNGEVAFKLYDTYGFPL FT DLTQDALRRRGISVDVDAFDKAMKRQKAEARANWSGSGDCVTETVWFSIRDQVGATEFL FT GYETEKAEGIITALIRDGEVVDHIDLGQKAMIVVNQTPFYGESGGQVGDSGIISGANFI FT FEVHDTQKKGDNVFIHIGEIKTGQAKKHDCVELIVDSARRRKIRANHSATHLLHESLRQ FT TLGSHVVQKGSFVSPDRLRFDFSHPKSISSEELKKIEDLANDIVLQNSKVTTRLMAIDD FT AIAEGAMALFGEKYGDEVRVISMGNNLEQTGSKKWWSIELCGGTHVQRTGDIGLIHIIS FT ETSVAAGVRRIEALTATAARLYLHGQDRRVYEIAGLLKTSPADVQERVQTLLDERRKLE FT KELNDSRKKIALNGGSVNSQGDIQTINGISFMGGVVSNILPKDLKALVDSGKKKIGSGV FT VAFISVSEDGKGSAVVGVTDDLTDTLNAVDLVRIISVTLGGQGGGGRRDMAQAGGSEGG FT KADEALVALKDSLKG" XX SQ Sequence 5409 BP; 1745 A; 1208 C; 837 G; 1615 T; 4 other; cctgcttttt tntgggaant cttcttacta atgcccaata aatctttttc atttctcgtg 60 ttctaaaagc agcagtcaaa gcctgcgcag canttnttga ccgagcaaca acaagtaaac 120 ctgatgtttc acgatcaaga cgatgaacca gccgcggttt ttcacctttt ttattgcgcc 180 atgcctcaag cataccgtca acatggcgcg ttaaaccaga accaccttgt acagctaaac 240 cagcaggttt attaaaaaca aaaatttttg gatcttcata gagaagcatt tttttcaaaa 300 gatccccatc atcctgctga ctgataacct tgctcgttat agaaatattt ctcttactct 360 caataaaaaa agatggcaca cgaatagatt gcccggtgac aagacgcata ttagctttaa 420 cacgcccacc gtcaacccgt acctgaccag aacgcaagat cttttgtaga tatccgaatc 480 caaggcctgg ataatgaacc ttaaaccagc gatctaaacg cataccgttt tcatcttctt 540 caacattttt tatttttatg ttcaccataa cggttaccgt attaccaaga tattttacta 600 atagtttcgt cttattgtct ttaataagta caaaactaca tttctttaaa taaacattat 660 cacgttacat tacagtcagt attcaaaatt gcattcccct actgcataaa ttccattagc 720 tcagatatat attctgccct tgtgcaattt ggagactatt atcccgtgtc gttatttaga 780 acttatgttc gtgttctttc atatctgaat caagaaaaaa atgcatttct tctcatttgc 840 accgctaata ttacattagc tattattaca attgcagaac ctattttatt tggacacgtt 900 attgatacca tcgcagataa atcagatact cttgtgactc tcgcagtctg gatgtgtttt 960 ggtatttcta acattattgc ttacgtcctc gtagctcgcg gtgctgatcg cttagcacac 1020 agatgccgtt taactgtttt agaaaagtct tttgcacgta ttatcagtat gccccttatt 1080 tggcatcaac aacgtggtac atctcatgcc cttcacacac tactgcgcgc tacagattcc 1140 atgtcttcta tatggcttga atttatgcga caacacctct caaccttcgt cgcactcttt 1200 gttctcgttc cagtaacctt taaaatgaac tggcgtcttt caatcgtttt aatggttctt 1260 gccatcctct atattttaat tgcacgtttg gtaatgcaaa aaacaaaaaa cgggcaagcc 1320 gctgtcgaac actatcacca taaccttttt aaacatatca ctgattcaat ctctaatgtt 1380 tccattgtac aaagttataa ccgaataacc gaagaaactt cagcacttca tcagcatacc 1440 aacaaccttc ttagtgcaca aacccctgtc ttaaattggt gggcacttgc aagtggttta 1500 aaccgaatgg cttcaactat ttcaatagtt tgtgtacttc ttcttggtgc ttttttcgtg 1560 ataaaaggcc aattaagtgt aggagaagtt gttacttttg ttggattttc tcaattaatg 1620 attggtcgtc ttgatcaaat tagtggtttc atcaatttag ctgtatcttc gcaagcaaag 1680 ctacaagaat tttttgatat ggaggattca acttttcaaa ccaatgaacc tgcaaatctt 1740 ccttctctcc caaacgttaa aggcgcgatc caatttcatc atgttaccta tgaatttcca 1800 aattcttccc aaggtgtctt tgatatttca tttgaggtta aagcaggaca aactgttgct 1860 attgtaggac caacaggtgc tggaaaaaca acattaatta atttattaca acgtgtatat 1920 gaccctactg ttggatatat cagcattgat ggaataaata taaattctat caatcgggaa 1980 tcgttacgca aagctttagc aacagtattt caagatgcag gtctttttga ccgtactatt 2040 cgcgataata tttctatagg aaaaacaggg gcaacagatg aagaacttta tgaggctaca 2100 aaaacggctt ctgctcatga ctttattcta aaaaagagca agaattatga tacattggtt 2160 ggtgaacgag gttcgcaatt atcaggcgga gaaaggcaac gattagcaat tgcacgcgct 2220 attttgaaaa atgctcctat tctcattttg gatgaagcaa ccagtgctct tgatgttgaa 2280 acagaaatcc gtgttaaaaa tgcgatcgat tgcataagcc agaatcgtac cacatttatt 2340 atagcccatc gcctttcaac aatccgtaat gctgatcttg tactcttttt agatcagggt 2400 cgcttaattg aaaaaggtag ctttcaagaa ttaatcaata aagatggcca cttctataaa 2460 ttgctgaaac gtggcggttt aacaatcaat caacccgcaa caaaagaaaa agatgacaat 2520 ataattccat tgcgcaaagc aatggcatta taaatcaatt ttgccttgca tattgaaata 2580 aaaattaaaa ctgaattaca gttttttccc tgagaaactg aaacgtaacc gtatagatca 2640 aacagttgca attatccttt aagagaatct tttaatgcta caagagcttc atcagccttg 2700 cccccctcag aaccaccagc ctgcgccata tcacgacgcc caccaccacc ttgcccccca 2760 agagtgactg aaataattcg cactaaatca acagcattca gcgtatcagt caaatcatcg 2820 gtaacaccaa caacagcact tcctttgcca tcctcagaaa cactgatgaa agcaacaaca 2880 ccagatccaa tcttcttctt tccagaatct actaatgcct taagatcctt tggtagaata 2940 ttactaacaa caccccccat aaaagaaatt ccattgatcg tttgaatatc tccctggcta 3000 ttaacagatc caccattaag agcaattttc ttgcgtgaat cgttcaactc tttttcaagc 3060 ttgcgacgct catcaagcaa agtttgaaca cgttcttgta catcagcagg agaagtcttt 3120 aaaagaccag caatttcata aacccgtcta tcttgaccat gaaggtaaag gcgcgctgct 3180 gtagctgtta acgcttcaat acgacgaacg ccagctgcta cagaagtttc agaaatgata 3240 tggatcaaac caatatcacc tgtcctttga acatgtgtgc ctccacaaag ttcaatagac 3300 caccattttt ttgatcctgt ctgttcaaga ttattcccca tagaaataac acgaacttca 3360 tcaccgtact tttcaccaaa cagtgccata gctccttcag caattgcatc atctattgcc 3420 ataagacgtg ttgttacctt gctattttgc aagactatat cattcgccaa atcttctatt 3480 ttctttagtt cctctgatga aatcgatttt ggatgggaaa aatcgaaacg caaccgatca 3540 ggtgatacaa aagaaccttt ctgaacaaca tgagatccca atgtttgacg caaagattca 3600 tgtaataaat gagtagcaga atggtttgca cgaatttttc gacgacgagc agaatcaaca 3660 attaattcga cgcaatcatg tttttttgcc tgaccagttt taatttcacc aatatgaatg 3720 aagacattat cgcctttttt ttgtgtatca tgcacttcaa aaataaaatt tgcgccagaa 3780 attataccac tatctccaac ctgccctcca gattctccat aaaaaggtgt ttgattaact 3840 acaatcatag ccttttggcc taaatcaata tggtcaacaa cctcaccatc acgtataagc 3900 gctgtaataa taccttcagc tttttctgtt tcataaccca aaaattctgt agccccaact 3960 tgatcacgaa tagaaaacca gactgtttct gttacacaat caccagaacc cgaccaattg 4020 gcacgcgctt ctgctttttg acgtttcatg gccttgtcaa acgcatcaac atcaacagat 4080 attccacgac gccgaagagc atcttgcgtc aaatcaagtg gaaatccata tgtgtcataa 4140 agtttaaaag caacttcacc attaaaataa tcaccctctt caagatgagt gcttgcttca 4200 ttcaacaaac caaggcctcg ctcaagagtt ttacgaaaac gagtttcctc caattttaaa 4260 atttctgaaa tcaaagattc agcacgcact aattcaggat aagcttgtcc catttcgctt 4320 atcaaaacag gcacaagacg ccacatcaac aaatcttttg aacctaataa atgagcgtga 4380 cgcatagcac gacgcataat acggcgtaaa acatatccac gaccttcatt agaaggcata 4440 ataccatcag caattaaaaa tgcagatgaa cgcaaatggt cagcaataac gcgatgacta 4500 gcgaaaaaat caccagttgc cttaacccct ataatctctt gtgaagcatg aattaacgtg 4560 cgaaaaagat caatatcata attatcatga acaccttgta aaacagcagc aatacgctct 4620 aatcccatcc ccgtatcaat ggaaggttga ggcaattcaa tccgcttctc tttactcaac 4680 tgctcatatt gcataaagac aaggttccaa atttcaatga aacgatcacc atcttcatca 4740 gcacttccag gaggaccacc ccaaatttta tcgccatgat cataaaaaat ctctgaacaa 4800 ggaccacaag gtcctgtgtc acccatcatc caaaaattat catttgttgc aatgcggata 4860 attttctctt ctgaaagacc tgaaatctta cgccataacc ccgctgctac atcatcatca 4920 tgataaactg taactaacaa tttatcttta gaaagacaaa attcctttgt taaaaggttc 4980 catgcataaa aaatcgcttc ttctttgaaa taattactaa aagaaaaatt accaagcatt 5040 tcaaaaaaag tatgatgacg cgccgtataa ccgacattat caagatcatt atgctttcca 5100 cctgcacgaa cacatttttg tgcagttgta gcccgattat aagaatgttt ttcaagtcca 5160 gtaaaaacat ttttaaagtc taccattcct gcgtttgtaa acattaatgt gggatcattg 5220 cgaggcacaa gtggactaga agaaagaact tcatgcccat tacgatgaaa ataatccaga 5280 aaagtagatc ggatattatt aacgctattc atattgacac ctgcaaagaa cagtacaaaa 5340 tcgaaaagat aagatctatt tttaatgtaa tagtcttttt accaatttaa aaataaatca 5400 ttacaatag 5409 // |
|