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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U67775; SV 1; linear; genomic DNA; STD; VRL; 285 BP.
XX
AC   U67775;
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DT   27-SEP-1996 (Rel. 49, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 7)
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DE   Kaposi's sarcoma-associated herpes-like virus vMIP-1B gene, complete cds.
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KW   .
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OS   Human herpesvirus 8
OC   Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae;
OC   Gammaherpesvirinae; Rhadinovirus.
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RN   [1]
RP   1-285
RX   PUBMED; 9032328.
RA   Nicholas J., Ruvolo V., Zong J., Ciufo D., Guo H.G., Reitz M.S.,
RA   Hayward G.S.;
RT   "A single 13-kilobase divergent locus in the Kaposi sarcoma-associated
RT   herpesvirus (human herpesvirus 8) genome contains nine open reading frames
RT   that are homologous to or related to cellular proteins";
RL   J. Virol. 71(3):1963-1974(1997).
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RN   [2]
RP   1-285
RX   DOI; 10.1038/nm0397-287
RX   PUBMED; 9055855.
RA   Nicholas J., Ruvolo V.R., Burns W.H., Sandford G., Wan X., Ciufo D.,
RA   Hendrickson S.B., Guo H.G., Hayward G.S., Reitz M.S.;
RT   "Kaposi's sarcoma-associated human herpesvirus-8 encodes homologues of
RT   macrophage inflammatory protein-1 and interleukin-6";
RL   Nat. Med. 3(3):287-292(1997).
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RN   [3]
RP   1-285
RA   Nicholas J.;
RT   ;
RL   Submitted (22-AUG-1996) to the EMBL/GenBank/DDBJ databases.
RL   Johns Hopkins Oncology Center, 418 North Bond Street, Baltimore, MD 21231,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..285
FT                   /organism="Human herpesvirus 8"
FT                   /mol_type="genomic DNA"
FT                   /note="Human herpesvirus 8; isolated from body cavity-based
FT                   lymphoma"
FT                   /db_xref="taxon:37296"
FT   CDS             1..285
FT                   /codon_start=1
FT                   /product="vMIP-1B"
FT                   /note="similar to macrophage inflammatory protein-1 (alpha
FT                   and beta)"
FT                   /db_xref="GOA:Q98157"
FT                   /db_xref="InterPro:IPR001811"
FT                   /db_xref="PDB:1CM9"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q98157"
FT                   /protein_id="AAB61702.1"
FT                   /translation="MDTKGILLVAVLTALLCLQSGDTLGASWHRPDKCCLGYQKRPLPQ
FT                   VLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR"
XX
SQ   Sequence 285 BP; 64 A; 76 C; 80 G; 65 T; 0 other;
     atggacacca agggcatcct gctcgtcgct gtgctgactg ccttgctttg tttgcaatct        60
     ggggacacgc tgggagcgtc ctggcataga ccggacaagt gctgtctcgg ttaccagaaa       120
     agaccattac cacaggtgct tctgtccagc tggtacccca cctcccaact gtgcagcaag       180
     ccgggtgtga tatttttgac aaagcgtggt cgccaggtgt gtgccgacaa atcgaaagac       240
     tgggtgaaga agctgatgca gcaattacca gtcactgctc gctga                       285
//
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