 |
|
EBI DbfetchID U66897; SV 1; linear; genomic DNA; STD; PRO; 5440 BP. XX AC U66897; XX DT 07-SEP-1996 (Rel. 49, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Bacteroides thetaiotaomicron neopullulanase (susA) and alpha-glucosidase DE (susB) genes, complete cds. XX KW . XX OS Bacteroides thetaiotaomicron OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. XX RN [1] RP 1-5440 RX PUBMED; 8955399. RA D'Elia J.N., Salyers A.A.; RT "Contribution of a neopullulanase, a pullulanase, and an alpha-glucosidase RT to growth of Bacteroides thetaiotaomicron on starch"; RL J. Bacteriol. 178(24):7173-7179(1996). XX RN [2] RP 1-5440 RA D'Elia J., Salyers A.; RT ; RL Submitted (14-AUG-1996) to the EMBL/GenBank/DDBJ databases. RL Microbiology, University of Illinois, 407 S. Goodwin Ave., Urbana, IL RL 61801, USA XX FH Key Location/Qualifiers FH FT source 1..5440 FT /organism="Bacteroides thetaiotaomicron" FT /strain="5482" FT /mol_type="genomic DNA" FT /db_xref="taxon:818" FT CDS 396..2096 FT /codon_start=1 FT /transl_table=11 FT /gene="susA" FT /product="neopullulanase" FT /db_xref="GOA:P71093" FT /db_xref="HSSP:1H3G" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:P71093" FT /protein_id="AAC44670.1" FT /translation="MKRNLLFIILLLLLPGLHQVFATSTIKKVAPTFWWAGMKNPELQI FT LLYGDRISSADVSLSADNITLQEVVKQENPNYLVLYLDLSKAAPQNFDIILKQGKKQIK FT IPYELKQRRPNASAVEGFDSSDVLYLIMPDRFANGNPSNDIIPGMLEGNVDRNEPFARH FT GGDLKGIENHLDYIADLGVTSIWLNPIQENDMKEGSYHGYAITDYYQVDRRFGSNEEFR FT KLTQEANAKGLKVVMDMIFNHCGSDNYLFKDMPSKDWFNFEGNYVQTSFKTATQMDPYA FT SDYEKKIAIDGWFTLTMPDFNQRNRHVATYLIQSSIWWIEYAGINGIRQDTHPYADFDM FT MARWSKAVNEEYPKFNIVGETWLGNNVLISYWQKDSRLAYPKNSNLPTVMDFPLMEEMN FT KAFDEETTEWNGGLFRLYEYLSQDIVYSHPMSLLTFLDNHDTSRFYRSEADTKNLDRYK FT QALTFLLTTRGIPQIYYGTEILMAADKANGDGLLRCDFPGGWPNDTKNCFDAANRTPQQ FT NEAFSFIKNCSNGEKETKSLPKVSSNISHRIKVSTFTNPNTVINQSLFS" FT CDS 2447..4663 FT /codon_start=1 FT /transl_table=11 FT /gene="susB" FT /product="alpha-glucosidase" FT /db_xref="InterPro:IPR019563" FT /db_xref="PDB:2D73" FT /db_xref="UniProtKB/TrEMBL:P71094" FT /protein_id="AAC44671.1" FT /translation="MKKRKILSLIAFLCISFIANAQQKLTSPDNNLVMTFQVDSKGAPT FT YELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLTKLDSKTNLYDGFEVKDTQTA FT TFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSIVIRFRLFNDGLGFRYEFPQQKSL FT NYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYTISRLSEIRGLMKEAITPNSSQTPF FT SQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNLDDKNMVFESWLTPDAKGDKGYMQ FT TPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADAASWVKPVKYIGVWWDMITGKGS FT WAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLVEGWNEGWED FT WFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFM FT ADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHEATRPTGICR FT TYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMDYTPGIFETHCNKMNPANN FT SQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIKDVALDWDETNYLEAEPG FT EYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIATVYADAKDADWKENPQ FT AYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL" XX SQ Sequence 5440 BP; 1740 A; 1238 C; 1152 G; 1310 T; 0 other; tctttttctc tccgtatctg ataagtttcc ttcttactta taatgtcatc cagtttttta 60 agggccgcct tatttatatc cgtatgcttt gcggacaagg aaagaggata aacaaaaaga 120 agaaacaaaa gataataggt tagatttctc ataaggtgct tttttaagat gtgacaaata 180 taatgattat agtaataaaa acgaaaaata tcgccataac aattttcatt ttcacttgta 240 tttttcgaca gaggcaataa cgataaaaag cttattatca acagcctatt caaaacaagc 300 atttatattt tctttctaac tgccatacgg catacccgat tcacctacat ttgcatcatc 360 ggttcccccg aacaaatttt aaaaatctag ttaccatgaa aaggaattta ttattcatta 420 tcttactatt attattaccc ggtcttcacc aggtattcgc aacaagcact ataaagaaag 480 tagccccgac cttttggtgg gcaggaatga agaatcccga attgcagata ctattatatg 540 gtgaccgcat atcatccgca gacgtcagtc tttctgccga taatatcacg ctgcaagaag 600 tggtgaagca ggagaatcct aattatctgg ttctgtattt agacctttcg aaggctgctc 660 cacagaactt tgacatcatc ctgaaacaag gcaaaaagca gataaaaatc ccttacgagc 720 ttaaacagcg ccggccgaat gcttcggcag tagaaggttt tgattcgagc gacgtgcttt 780 atcttattat gccggaccgt tttgccaatg gcaacccctc caacgacatc attcccggaa 840 tgctggaagg aaatgtagac cgtaatgagc ctttcgcacg tcatggcggt gatttgaaag 900 gaatagagaa tcatctggat tacatagcag acctcggagt caccagtata tggctcaacc 960 cgattcagga aaatgacatg aaagaaggat cgtatcacgg ttatgccatt accgattatt 1020 atcaggtaga ccgccgcttc ggcagtaacg aagagttccg caaacttact caggaagcta 1080 atgccaaagg gctgaaagtc gtaatggaca tgatcttcaa ccattgcggt tcggacaact 1140 atctgtttaa agatatgccc tccaaagact ggtttaactt tgaaggcaac tacgtgcaga 1200 ccagcttcaa gactgccact caaatggacc cgtatgcttc cgattacgaa aagaaaatcg 1260 ctatcgacgg ttggttcaca ctgaccatgc cggacttcaa ccaaagaaac cgtcatgtag 1320 ctacttatct gatacagagc agtatctggt ggattgaata cgccggtatc aacggcatcc 1380 gtcaggatac acacccttat gccgacttcg atatgatggc acgctggtcc aaagcggtca 1440 atgaagaata tcccaagttc aacattgtag gtgaaacatg gctgggcaac aatgtactca 1500 tctcctactg gcagaaagac agcagactcg cttatccgaa gaacagcaat ctcccgactg 1560 tcatggactt cccgctaatg gaagagatga acaaggcttt cgacgaagag actaccgaat 1620 ggaacggagg acttttcaga ctctacgaat atctatcaca ggacatcgtc tacagccatc 1680 caatgagcct gctgaccttc ctcgacaatc acgatacttc ccgcttctac cgttcggaag 1740 cagatacaaa gaatctggac cgatacaagc aagccctgac gttcttactg acaacccgcg 1800 gaataccgca gatatattat ggaactgaaa tcctgatggc agccgacaag gcgaatggag 1860 acggcctgct ccgctgcgac ttccccggag gctggccgaa cgatacaaaa aactgctttg 1920 acgcagccaa ccgcactcca cagcaaaatg aagcattctc ctttatcaaa aactgctcca 1980 atggagaaaa ggaaacgaag tcattgccaa aggtcagctc aaacatttcg caccgaataa 2040 aggtgtctac gtttacgaac ccaaatacgg tgataaatca gtcgttgttt tcctgaatgg 2100 aaacgaccgg gaacagacca ttgacctggt tccttaccaa gaaatacttc ctacctcatc 2160 tgctttcgat ttattgacag agaaaaggtt gaattaaaga tttgaaatta acacttccaa 2220 gtcgtgaaaa tatacctttt atccttttaa taagttcact tcaacttata tttatcagaa 2280 tacagaaaag aaataaacta ctgtaaaaca aaacattaac attaatacaa acttgtattt 2340 ttattctaga caacccaaag tctcaagatg gttgctatat ttgcaatatc cggaacagag 2400 cggagtaaaa atattagtta gcttataatt taataccata aatagaatga aaaagagaaa 2460 gattttatcg ctcatcgcat tcctttgcat ctcattcatt gcgaatgccc aacagaaatt 2520 aacctcaccg gacaacaatc tggtaatgac cttccaagta gactcaaaag gtgccccaac 2580 gtatgaactg acgtataaga acaaagtggt aatcaaaccc agcactctcg gactggaact 2640 gaagaaagaa gataatacca gaaccgactt cgactgggtg gaccgcagag acctgacaaa 2700 acttgactca aagaccaacc tgtacgacgg cttcgaagta aaggataccc aaacggctac 2760 ttttgatgaa acctggcaac cggtttgggg agaagaaaaa gaaatccgca atcattataa 2820 cgaactggca gtcaccctgt atcaacccat gaatgaccgt tctatcgtta tccgtttccg 2880 tctgttcaat gacggtctgg gattccgtta tgaatttcct cagcagaagt cactcaatta 2940 cttcgtgatc aaggaagagc attctcagtt tggcatgaac ggcgatcata tcgctttctg 3000 gataccgggt gactatgata cgcaggaata tgactacacc atttcccgct tatcagaaat 3060 cagagggctg atgaaagaag cgatcactcc gaactcttct cagactcctt tctcacagac 3120 aggcgtacaa actgcactga tgatgaaaac ggatgatggc ttatacatca atcttcatga 3180 agccgctttg gttgattact catgtatgca cctcaatctg gacgacaaga atatggtatt 3240 cgaatcctgg ttgacaccgg atgccaaagg agacaaaggg tatatgcaga ctccctgcaa 3300 cacaccttgg cgtacgatta tcgtgagcga tgacgcccgc aatatcctcg cttcacgtat 3360 cactctcaac ctgaacgaac catgcaagat agcggatgcc gcttcttggg taaaacccgt 3420 gaaatatatc ggcgtatggt gggacatgat caccggaaaa ggctcatggg cttacaccga 3480 cgaactgacc agcgtaaaac tcggtgaaac ggattactcc aaaacaaaac cgaacggcaa 3540 acattctgcc aacacagcca acgtgaaacg ttacattgac tttgcagccg ctcacggatt 3600 cgatgcagta ctggttgaag gctggaacga aggctgggaa gactggttcg gcaacagcaa 3660 agactatgtg tttgatttcg tgactcctta tcccgacttc gatgtgaagg aaatccaccg 3720 ctatgcagcc aggaaaggaa tcaaaatgat gatgcatcac gaaacttccg cttctgtacg 3780 caactacgaa cgccacatgg acaaagccta ccagtttatg gcagacaatg gatacaactc 3840 cgtaaagagc ggttatgtag gcaacatcat cccccgcggc gaacatcact acggacaatg 3900 gatgaacaat cactacctgt atgcagtgaa gaaagccgcc gattacaaaa tcatggtgaa 3960 tgcacacgaa gcaacccgcc ctaccggtat ctgccgtaca tatccgaatc tgatcggtaa 4020 tgaatccgcc cgcggtacag aatatgaatc attcggaggc aacaaagtat atcatacaac 4080 gattctgcct ttcacacgcc tggttggcgg tccgatggat tacactcccg gcatcttcga 4140 aacgcattgc aacaagatga atccggcaaa taattctcag gtacgttcta ccattgcacg 4200 ccagttggca ctatacgtta ccatgtacag tcctttgcag atggctgccg acattccgga 4260 aaactacgaa cgttttatgg acgctttcca gttcatcaaa gacgtagctc tcgactggga 4320 cgaaacgaac tatctggaag cagaaccggg agaatacatc acaattgccc gtaaggcaaa 4380 agatacggac gactggtacg taggctgcac agccggtgaa aacggtcata cctccaaact 4440 cgtattcgac ttcctgactc cgggcaaaca atacatcgct accgtctacg cggatgccaa 4500 agatgccgac tggaaagaga acccgcaggc ttataccatc aagaaaggta ttctgacgaa 4560 taagagcaag ctgaacctgc acgcagctaa cggaggcgga tatgctatca gcatcaaaga 4620 ggtaaaagac aaatcagaag ctaaaggttt gaaaagatta taataaggaa aagaaataac 4680 aaagatagag aatatacatt ttggtaaaaa agagagtgtt ttcgagcact aagaacaatg 4740 acgaagagaa ggttttcaat aggtattttt aagagagaat gataagagaa attacaatta 4800 actttaaaga caaaaacatg aaaaaaggaa actttatgtt caaggtcctg cttatgctta 4860 tagctggaat attcttgtcc attgacgcat ttgctcagca aattactgtc aaaggaatag 4920 tgaaagacac aacgggtgaa ccggttatcg gtgccaatgt tgtggtgaaa ggcactacca 4980 ccggaacgat taccgatttc gacggcaact tccagttgtc tgccaagcaa ggtgacataa 5040 ttgttgtttc attcatcgga taccagccac aggaacttcc cgtcgccgca caaatgaatg 5100 taatactgaa agacgatacg gaaatactgg acgaagtagt agtcatcggt tacggtcagg 5160 tgaaaaagaa cgatatgacc ggttcggtaa tggctatcaa gcccgatgaa ctaagtaaag 5220 gtattacgac gaatgctcag gatatgttat ccggtaaaat agccggtgtc agcgtgatct 5280 ccaatgacgg tacaccgggt ggtggcgctc aaatccgtat tcgtggcggt tcttcattga 5340 atgcaagcaa tgacccgctg atcgttattg acggtctggc tattgacaat gaaggtatca 5400 aagggatggc aaacggtttg tcaatggtca accctgcgga 5440 // |
|