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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U63813; SV 1; linear; mRNA; STD; FUN; 971 BP.
XX
AC   U63813;
XX
DT   16-OCT-1997 (Rel. 52, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Orpinomyces sp. PC-2 lichenase (licA) mRNA complete cds.
XX
KW   .
XX
OS   Orpinomyces sp. PC-2
OC   Eukaryota; Fungi; Neocallimastigomycota; Neocallimastigomycetes;
OC   Neocallimastigales; Neocallimastigaceae; Orpinomyces.
XX
RN   [1]
RP   1-971
RX   PUBMED; 9324248.
RA   Chen H., Li X.L., Ljungdahl L.G.;
RT   "Sequencing of a 1,3-1,4-beta-D-glucanase (lichenase) from the anaerobic
RT   fungus Orpinomyces strain PC-2: properties of the enzyme expressed in
RT   Escherichia coli and evidence that the gene has a bacterial origin";
RL   J. Bacteriol. 179(19):6028-6034(1997).
XX
RN   [2]
RP   1-971
RA   Chen H.Z., Li X.-L., Ljungdahl L.G.;
RT   ;
RL   Submitted (15-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biochemistry and Molecular Biology, University of Georgia,
RL   Green Street, Athens, GA 30602, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..971
FT                   /organism="Orpinomyces sp. PC-2"
FT                   /strain="PC-2"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:50059"
FT   CDS             123..860
FT                   /codon_start=1
FT                   /gene="licA"
FT                   /product="lichenase"
FT                   /function="hydrolyses of beta-glucan in grain seeds and
FT                   plant cell walls"
FT                   /EC_number="3.2.1.73"
FT                   /note="polysaccharide hydrolase; (1,3-1,4)-beta-glucanase"
FT                   /db_xref="GOA:O14412"
FT                   /db_xref="InterPro:IPR000757"
FT                   /db_xref="InterPro:IPR008264"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="UniProtKB/Swiss-Prot:O14412"
FT                   /protein_id="AAD04192.1"
FT                   /translation="MKSIISIAALSVLGLISKTMAAPAPAPVPGTAWNGSHDVMDFNYH
FT                   ESNRFEMSNWPNGEMFNCRWTPNNDKFENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMF
FT                   QVNMKPIKNPGVVSSFFTYTGPSDGTKWDEIDIEFLGYDTTKVQFNYYTNGQGHHEHIH
FT                   YLGFDASQGFHTYGFFWARNSITWYVDGTAVYTAYDNIPDTPGKIMMNAWNGIGVDDWL
FT                   RPFNGRTNISAYYDWVSYDAPRN"
XX
SQ   Sequence 971 BP; 373 A; 117 C; 155 G; 326 T; 0 other;
     aataaaagaa aaaaaaaata tatattaaat aataatatat attaaagtaa ataaaaaaaa        60
     atttaagaaa atattttcat tatataatta atattttttg ataaaataaa gattataata       120
     aaatgaaaag tataatttct attgctgctt tatctgtttt aggattgatt tctaaaacta       180
     tggctgctcc tgctcccgct cctgttcctg gtactgcttg gaatggtagt catgatgtca       240
     tggatttcaa ctatcatgaa agtaaccgtt ttgaaatgtc aaactggcca aatggtgaaa       300
     tgtttaattg tagatggact ccaaataatg acaaatttga aaatggtaaa ttaaagctta       360
     ctattgatag agatggttcc ggatatactt gtggtgaata tcgtactaaa aactattatg       420
     gatatggtat gttccaagtt aatatgaaac caattaagaa tccaggagtt gtttcttcct       480
     tctttactta cacaggacca agtgatggaa ctaagtggga tgaaattgat atagaattcc       540
     ttggttatga tacaaccaaa gttcaattta actactacac taatggacaa ggtcatcatg       600
     aacatattca ttatcttgga tttgatgcct ctcaaggatt ccatacctat ggtttcttct       660
     gggcgagaaa ttctattaca tggtatgtag atggtacagc cgtttacact gcttacgaca       720
     atattccaga tacaccaggt aagattatga tgaatgcttg gaatggtatt ggagttgatg       780
     actggcttag accatttaat ggaagaacta atattagtgc ctactatgat tgggtatctt       840
     atgatgcacc aagaaactaa attatttaaa taaatatata atttttgttt taaaatttaa       900
     aaaaatatat atatatatat tataaattaa tatgaaaaat aaaaataaga tgtaaaaaaa       960
     aaaaaaaaaa a                                                            971
//
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