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EBI DbfetchID U62096; SV 1; linear; genomic DNA; STD; PRO; 3084 BP. XX AC U62096; XX DT 06-MAY-1997 (Rel. 51, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Lactobacillus amylovorus alpha-amylase gene, complete cds. XX KW . XX OS Lactobacillus amylovorus OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. XX RN [1] RP 1-3084 RX DOI; 10.1016/S0378-1119(97)00309-0 RX PUBMED; 9370276. RA Giraud E., Cuny G.; RT "Molecular characterization of the alpha-amylase genes of Lactobacillus RT plantarum A6 and Lactobacillus amylovorus reveals an unusual 3' end RT structure with direct tandem repeats and suggests a common evolutionary RT origin"; RL Gene 198(1-2):149-157(1997). XX RN [2] RP 1-3084 RA Giraud E., Cuny G.; RT ; RL Submitted (25-JUN-1996) to the EMBL/GenBank/DDBJ databases. RL Biotechnology, ORSTOM, 911, Av. Agropolis, CEDEX 1, Montpellier 34032, RL France XX DR CABRI; CIP 102989. XX FH Key Location/Qualifiers FH FT source 1..3084 FT /organism="Lactobacillus amylovorus" FT /strain="CIP 102989" FT /mol_type="genomic DNA" FT /db_xref="taxon:1604" FT CDS 203..3064 FT /codon_start=1 FT /transl_table=11 FT /product="alpha-amylase" FT /db_xref="GOA:Q48502" FT /db_xref="HSSP:1BAG" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q48502" FT /protein_id="AAC45781.1" FT /translation="MKKKKSFWLVSFLVIVASVFFISFGFSNHSKQVAQAASDTTSTDH FT SSNDTADSVSDGVILHAWCWSFNTIKNNLKQIHDAGYTAVQTSPVNEVKVGNSGSKSLN FT NWYWLYQPTKYSIGNYYLGTEAEFKSMCAAAKEYNIRIIVDATLNDTTSDYSAISDEIK FT SISDWTHGNTQISNWSDREDVTQNSLLGFYDWNTQNSQVQTYLKNHLERLISDGASGFR FT YDAATHIELPSQYDGSYGSNFWPNITDNGSEFQYGEVLQDSISKESDYANYMSVTASNY FT GNTIRNALKNRDFTASTLQNFNISVPASKLVTWVESHDNYANDDQVSTWMNSSDIKLGW FT AVVASRSGSVPLFFDRPVDGGNGTRFPGSSEIGDAGSSLYYDKAVVAVNKFHNAMAGQS FT EYISNPNGNTKIFENERGSKGVVFANASDSSYSLNVKTSLADGTYENKAGSDEFTVKNG FT YLTGTIQGREVVVLYGDPTSSSSTTTETKKVYFEKPSSWGSRVYAYVYNKNTNKAITSA FT WPGKKMTALGNDKYELDLDTDEDDSDLAVIFTDGTKQTPAANEAGFTFTADATYDQNGV FT VKKVYFEKPSSWGSRVYAYVYNKNTNKAITSAWPGKKMTALGNDKYELDLDTDEDDSDL FT AVIFTDGTKQTPAANEAGFTFTADATYDQNGVVKKVYFEKPSSWGSRVYAYVYNKNTNK FT AITSAWPGKKMTALGNDKYELDLDTDEDDSDLAVIFTDGTKQTPAANEAGFTFTADATY FT DQNGVVKKVYFEKPSSWGSRVYAYVYNKNTNKAITSAWPGKKMTALGNDKYELDLDTDE FT DDSDLAVIFTDGTKQTPAANEAGFTFTADATYDQNGVVKKVYFEKPSSWGSRVYAYVYN FT KNTNKAITSAWPGKKMTALGNDKYELDLDTDEDDSDLAVIFTDGTKQTPAANEAGFTFT FT ADATYDQNGVVRTSDSSSTSSNS" FT repeat_region 1662..3027 FT /rpt_type=TANDEM FT /rpt_unit_range=1662..1935 FT /note="five tandem repeat units of 273 nucleotides" XX SQ Sequence 3084 BP; 993 A; 506 C; 646 G; 939 T; 0 other; ataaccacac gcctttggcg tgattatcag ctttcaagtt tcagttacta aaactaatac 60 tgactataaa acagaagcaa aaaaattttc gatttttatg aaaacggtcg caaagaagtt 120 agcaaaaata tataatttct tttgaaattg ttcacttggc caagctgcag tttcaatatt 180 ttaataaagg gggcagtaaa aagtgaaaaa aaagaaaagt ttctggcttg tttctttttt 240 agttatagta gctagtgttt tctttatatc ttttggattt agcaatcatt ctaaacaagt 300 tgctcaagcg gctagtgata cgacatcaac tgatcactca agcaatgata cagctgattc 360 tgttagcgac ggtgttattt tgcatgcatg gtgctggtcg ttcaacacga ttaaaaacaa 420 cttgaaacag attcatgacg ccggctacac agcggttcaa acttcacctg ttaatgaagt 480 taaagttgga aatagcgggt ctaagtcatt aaataactgg tattggctat atcagccaac 540 taaatatagt attggtaact attatttagg aacggaagct gaatttaagt caatgtgcgc 600 tgctgctaaa gaatataata tcaggatcat tgtcgatgca actctgaatg atacaacaag 660 tgattatagt gcaatttcgg atgaaattaa aagtatttca gattggacac atggtaacac 720 acaaatttcg aattggagtg atcgtgaaga tgttactcaa aattcgttgt taggtttcta 780 tgattggaat actcaaaatt ctcaagttca gacgtatttg aagaatcatt tggaacgctt 840 gatttctgac ggagcttcag gcttccgtta tgatgcagct acgcatattg aacttccaag 900 tcaatatgat ggcagctatg gcagcaattt ctggccaaat attactgata atgggtctga 960 atttcagtat ggtgaagttt tgcaggactc gatttcaaaa gaatcagatt atgctaatta 1020 catgagtgtt acagcttcaa attacggcaa tacgattcgc aatgcgttaa agaatcgtga 1080 ttttaccgca agtactttgc agaatttcaa catcagtgtt ccagcttcta aattagtaac 1140 ttgggtcgaa tcgcatgata attatgctaa cgatgatcaa gtttcgactt ggatgaatag 1200 tagtgatatt aaattaggct gggctgttgt tgcttcgcgt tctggtagtg ttccgctgtt 1260 ctttgaccgt ccagttgatg gtggtaatgg tactcggttc cctggcagtt cagaaattgg 1320 tgatgctggc agcagtttgt attatgataa agcagttgta gctgttaata aattccataa 1380 tgcaatggct ggtcaatctg aatatatttc taatccaaat ggcaatacca agatttttga 1440 aaatgaacgt ggcagcaaag gggttgtttt tgcaaacgct tccgacagtt catatagttt 1500 gaatgttaaa actagtttag ctgatgggac ttatgaaaac aaggctggtt cagatgaatt 1560 taccgttaaa aatggttatt taaccggtac aattcaagga cgtgaagttg ttgttcttta 1620 cggggatcca acaagcagca gcagtacaac aacagaaact aaaaaggttt attttgaaaa 1680 gccttcaagt tggggtagta gagtttatgc ctatgtttat aataaaaata cgaataaagc 1740 tataacttca gcttggcctg gcaaaaaaat gaccgcttta ggtaacgaca aatatgaatt 1800 ggatctcgac actgatgaag atgactctga tttagctgtt atctttaccg atgggacaaa 1860 gcaaacacca gcagctaatg aggctggttt tacctttacg gctgatgcca cttatgatca 1920 aaatggtgtc gtaaaaaagg tttattttga aaagccttca agttggggta gtagagttta 1980 tgcctatgtt tataataaaa atacgaataa agctataact tcagcttggc ctggcaaaaa 2040 aatgaccgct ttaggtaacg acaaatatga attggatctc gacactgatg aagatgactc 2100 tgatttagct gttatcttta ccgatgggac aaagcaaaca ccagcagcta atgaggctgg 2160 ttttaccttt acggctgatg ccacttatga tcaaaatggt gtcgtaaaaa aggtttattt 2220 tgaaaagcct tcaagttggg gtagtagagt ttatgcctat gtttataata aaaatacgaa 2280 taaagctata acttcagctt ggcctggcaa aaaaatgacc gctttaggta acgacaaata 2340 tgaattggat ctcgacactg atgaagatga ctctgattta gctgttatct ttaccgatgg 2400 gacaaagcaa acaccagcag ctaatgaggc tggttttacc tttacggctg atgccactta 2460 tgatcaaaat ggtgtcgtaa aaaaggttta ttttgaaaag ccttcaagtt ggggtagtag 2520 agtttatgcc tatgtttata ataaaaatac gaataaagct ataacttcag cttggcctgg 2580 caaaaaaatg accgctttag gtaacgacaa atatgaattg gatctcgaca ctgatgaaga 2640 tgactctgat ttagctgtta tctttaccga tgggacaaag caaacaccag cagctaatga 2700 ggctggtttt acctttacgg ctgatgccac ttatgatcaa aatggtgtcg taaaaaaggt 2760 ttattttgaa aagccttcaa gttggggtag tagagtttat gcctatgttt ataataaaaa 2820 tacgaataaa gctataactt cagcttggcc tggcaaaaaa atgaccgctt taggtaacga 2880 caaatatgaa ttggatctcg acactgatga agatgactct gatttagctg ttatctttac 2940 cgatgggaca aagcaaacac cagcagctaa tgaggctggt tttaccttta cggctgatgc 3000 cacttatgat caaaatggtg tcgtaagaac ttctgattca agcagcacat caagcaattc 3060 gtaagccgat accagcagtt catc 3084 // |
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