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EBI DbfetchID U62095; SV 1; linear; genomic DNA; STD; PRO; 3392 BP. XX AC U62095; XX DT 03-JUN-1997 (Rel. 52, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Lactobacillus plantarum alpha-amylase gene, complete cds. XX KW . XX OS Lactobacillus plantarum OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. XX RN [1] RP 1-3392 RX DOI; 10.1016/S0378-1119(97)00309-0 RX PUBMED; 9370276. RA Giraud E., Cuny G.; RT "Molecular characterization of the alpha-amylase genes of Lactobacillus RT plantarum A6 and Lactobacillus amylovorus reveals an unusual 3' end RT structure with direct tandem repeats and suggests a common evolutionary RT origin"; RL Gene 198(1-2):149-157(1997). XX RN [2] RP 1-3392 RA Giraud E., Cuny G.; RT ; RL Submitted (25-JUN-1996) to the EMBL/GenBank/DDBJ databases. RL Biotechnology, ORSTOM, 911, Av. Agropolis, CEDEX 1, Montpellier 34032, RL France XX FH Key Location/Qualifiers FH FT source 1..3392 FT /organism="Lactobacillus plantarum" FT /strain="A6" FT /mol_type="genomic DNA" FT /db_xref="taxon:1590" FT CDS 362..3100 FT /codon_start=1 FT /transl_table=11 FT /product="alpha-amylase" FT /note="hydrolase" FT /db_xref="GOA:O06915" FT /db_xref="HSSP:1BAG" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:O06915" FT /protein_id="AAC45780.1" FT /translation="MKKKKSFWLVSFLVIVASVFFISFGLSNYSKQVAQADSDTTSTDH FT SSNDTADSVSDGVILHAWCWSFNTIKNNLKQIHDAGYTAVQTSPVNEVKVGNSASKSLN FT NWYWLYQPTKYSIGNYYLGTEAEFKSMCAAAKEYNIRIIVDATLNDTTSDYSAISDEIK FT SISDWTHGNTQISNWSDREDVTQNSLLGFYDWNTQNSQVQTYLKNHLERLISDGASGFR FT YDAATHIELPSQYDGSYGSNFWPNITDNGSEFQYGEVLQDSISKESDYANYMSVTASNY FT GNTIRNALKNRDFTASTLQNFNISVPASKLVTWVESHDNYANDDQVSTWMNSSDIKLGW FT AVVASRSGSVPLFFDRPVDGGNGTRFPGSSEIGDAGSSLYYDKAVVAVNKFHNAMAGQS FT EYISNPNGNTKIFENERGSKGVVFANASDSSYSLNVKTSLADGTYENKAGSDEFTVKNG FT YLTGTIQGREVVVLYGDPTSSSSSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAIT FT SAWPGKEMTALGHDEYELDLDTDEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQN FT GVVTTSDSSSSSSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAITSAWPGKEMTAL FT GHDEYELDLDTDEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQNGVVTTSDSSSS FT SSSTTTETKKVYFEKPSSWGSTVYAYVYNKNTNKAITSAWPGKEMTALGHDEYELDLDT FT DEDDSDLAVIFTDGTNQTPAANEAGFTFTADATYDQNGVVTTSDSSSSSSSTTTETKKV FT YFEKPSSWGSTVYAYVYNKNTNKAITSAWPGKEMTALGHDEYELDLDTDEDDSDLAVIF FT TDGTNQTPAANEAGFTFTADATYDQNGVVTTSDSSSTSSSS" FT repeat_region 1793..3077 FT /rpt_type=TANDEM FT /rpt_unit_range=1794..2115 FT /note="four tandem repeat units of 321 nucleotides" XX SQ Sequence 3392 BP; 1092 A; 587 C; 695 G; 1018 T; 0 other; aagcttccac atcctggcgg atcagatcga attgttgccg acaaatatcg ctttggtaat 60 gatgactaaa atgttgctat gatcaccaac ttttttgaca gtagtttatc aaattacttg 120 gtcaaaatca aagatactaa acagcttcta aaaaagccaa taaccacacg cctttggcgt 180 gattatcagc tttcaagttt cagttactaa aactaatact gactataaaa cagaagcaaa 240 aaaattttcg atttttatga aaacggtcgc aaagaagtta gcaaaaatat ataatttctt 300 ttgaaagtgt tcacttggcc aagctgcagt ttcaatattt taataaaggg ggcagtaaaa 360 agtgaaaaaa aagaaaagtt tctggcttgt ttctttttta gttatagtag ctagtgtttt 420 ctttatatct tttggattga gcaattattc taaacaagtt gctcaagcgg atagtgatac 480 gacatcaact gatcactcaa gcaatgatac agctgattct gttagtgacg gtgttatttt 540 gcatgcatgg tgctggtcgt tcaacacgat taaaaacaac ttgaaacaga ttcatgacgc 600 cggctacaca gcggttcaaa cttcacctgt taatgaagtt aaagttggaa atagcgcgtc 660 taagtcatta aacaactggt attggctata tcagccaact aaatatagta ttggtaacta 720 ttatttagga acggaagctg aatttaagtc aatgtgcgct gctgctaaag aatataatat 780 caggatcatt gtcgatgcaa ctctgaatga tacaacaagt gattatagtg caatttcgga 840 tgaaattaaa agtatttcag attggacaca tggtaacaca caaatttcga attggagtga 900 tcgtgaagat gttactcaaa attcgttgtt aggtttctat gattggaata ctcaaaattc 960 tcaagttcag acgtatttga agaatcattt ggaacgcttg atttctgacg gagcttcagg 1020 cttccgttat gatgcagcta cgcatattga acttccaagt caatatgatg gcagctatgg 1080 cagcaatttc tggccaaata ttactgataa tgggtctgaa tttcagtatg gtgaagtttt 1140 gcaggactcg atttcaaaag aatcagatta tgctaattac atgagtgtta cagcttcaaa 1200 ttacggcaat acgattcgca atgcgttaaa gaatcgtgat tttaccgcaa gtactttgca 1260 gaatttcaac atcagtgttc cagcttctaa attagtaact tgggtcgaat cgcatgataa 1320 ttatgctaac gatgatcaag tttcgacttg gatgaatagt agtgatatta aattaggctg 1380 ggctgttgtt gcttcgcgtt ctggtagtgt tccgctgttc tttgaccgtc cagttgatgg 1440 tggtaatggt actcggttcc ctggcagttc agaaattggt gatgctggca gcagtttgta 1500 ttatgataaa gcagttgtag ctgttaataa attccataat gcaatggctg gtcaatctga 1560 atatatttct aatccaaatg gcaataccaa gatttttgaa aatgaacgtg gcagcaaagg 1620 ggttgttttt gcaaacgctt ccgacagttc atatagtttg aatgttaaaa ctagtttagc 1680 tgatgggact tatgaaaaca aggctggttc agatgaattt accgttaaaa atggttattt 1740 aaccggtaca attcaaggac gtgaagttgt tgttctttac ggggatccaa caagcagcag 1800 cagtagtagt acaacaacag aaactaaaaa ggtttatttt gaaaagcctt caagttgggg 1860 tagtacagtt tatgcctatg tttataataa aaatacgaat aaagctataa cttcagcttg 1920 gcctggcaaa gaaatgaccg ctttaggtca cgacgaatat gaattggatc tcgacactga 1980 tgaagatgac tctgatttag ctgttatctt taccgatggg acaaatcaaa caccagcagc 2040 taatgaggct ggttttacct ttacggctga tgccacttat gatcaaaatg gtgtcgtaac 2100 aacttctgat tcaagcagca gcagtagtag tacaacaaca gaaactaaaa aggtttattt 2160 tgaaaagcct tcaagttggg gtagtacagt ttatgcctat gtttataata aaaatacgaa 2220 taaagctata acttcagctt ggcctggcaa agaaatgacc gctttaggtc acgacgaata 2280 tgaattggat ctcgacactg atgaagatga ctctgattta gctgttatct ttaccgatgg 2340 gacaaatcaa acaccagcag ctaatgaggc tggttttacc tttacggctg atgccactta 2400 tgatcaaaat ggtgtcgtaa caacttctga ttcaagcagc agcagtagta gtacaacaac 2460 agaaactaaa aaggtttatt ttgaaaagcc ttcaagttgg ggtagtacag tttatgccta 2520 tgtttataat aaaaatacga ataaagctat aacttcagct tggcctggca aagaaatgac 2580 cgctttaggt cacgacgaat atgaattgga tctcgacact gatgaagatg actctgattt 2640 agctgttatc tttaccgatg ggacaaatca aacaccagca gctaatgagg ctggttttac 2700 ctttacggct gatgccactt atgatcaaaa tggtgtcgta acaacttctg attcaagcag 2760 cagcagtagt agtacaacaa cagaaactaa aaaggtttat tttgaaaagc cttcaagttg 2820 gggtagtaca gtttatgcct atgtttataa taaaaatacg aataaagcta taacttcagc 2880 ttggcctggc aaagaaatga ccgctttagg tcacgacgaa tatgaattgg atctcgacac 2940 tgatgaagat gactctgatt tagctgttat ctttaccgat gggacaaatc aaacaccagc 3000 agctaatgag gctggtttta cctttacggc tgatgccact tatgatcaaa atggtgtcgt 3060 aacaacttct gattcaagca gcacatcaag cagttcgtaa gccgatacca gcagttcatc 3120 aagcagctcg gctgtaactg ctacagaaac cagtggtaac actagttcct ctagttctag 3180 cgttagccaa cctactaaac atcaattggc agttaaattt tttgtattac gtgataatta 3240 tgtcttcaag gcaattgctg tcgaaacgtc cactagggta taccctaata gtcatttgca 3300 cttttacact atactaggag ttatagacgt gcattaggac tgttaaaaaa ggaaacgttg 3360 agactagatt cgtaacgcga ctctagagga tc 3392 // |
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