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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U56407; SV 1; linear; mRNA; STD; ROD; 1362 BP.
XX
AC   U56407;
XX
DT   01-SEP-1996 (Rel. 49, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Rattus norvegicus ubiquitin conjugating enzyme mRNA, complete cds.
XX
KW   .
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-1362
RX   PUBMED; 8754804.
RA   Wing S.S., Bedard N., Morales C., Hingamp P., Trasler J.;
RT   "A novel rat homolog of the Saccharomyces cerevisiae ubiquitin-conjugating
RT   enzymes UBC4 and UBC5 with distinct biochemical features is induced during
RT   spermatogenesis";
RL   Mol. Cell. Biol. 16(8):4064-4072(1996).
XX
RN   [2]
RP   1-1362
RA   Wing S.S.;
RT   ;
RL   Submitted (24-APR-1996) to the EMBL/GenBank/DDBJ databases.
RL   Simon S. Wing, McGill University, Polypeptide Lab, Dept. of Medicine, 3640
RL   University St., Room W315, Montreal, Quebec, Canada, H3A 2B2
XX
DR   Ensembl-Gn; ENSRNOG00000024535; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000036278; Rattus_norvegicus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Rattus norvegicus"
FT                   /mol_type="mRNA"
FT                   /dev_stage="adult"
FT                   /clone="UBC8A"
FT                   /tissue_type="testis"
FT                   /db_xref="taxon:10116"
FT   5'UTR           1..76
FT   CDS             77..520
FT                   /codon_start=1
FT                   /product="ubiquitin conjugating enzyme"
FT                   /function="ligation of ubiquitin to proteins"
FT                   /db_xref="GOA:P70711"
FT                   /db_xref="InterPro:IPR000608"
FT                   /db_xref="InterPro:IPR016135"
FT                   /db_xref="UniProtKB/Swiss-Prot:P70711"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAC52942.1"
FT                   /translation="MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPY
FT                   QGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLL
FT                   SISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM"
FT   3'UTR           521..1362
XX
SQ   Sequence 1362 BP; 396 A; 312 C; 271 G; 383 T; 0 other;
     ccaaaccaac aaggcagcca caggccgtcg gtgcctgccg ccttccacca ggggcccgcc        60
     aagacaacct tccaccatgg ctttgaagag aatccacaag gaactgaacg acctggcgca       120
     ggatccccca gcacagtgtt cagcaggtcc tgtcggggaa gatatgttcc attggcaagc       180
     tacaatcatg gggccaaatg acagtcccta ccagggtgga gcatttttct tgacaattga       240
     tttcccaaca gagtacccct tcaaaccacc taaggttgaa tttacaacaa gaatttatca       300
     tccaaatgtt aacagtaatg gcagcatttg tcttgatatt cttcggtcac agtggtctcc       360
     agcactaact atttcaaaag tacttttgtc catcagttct ctgttgtgtg atcccaatcc       420
     cgatgatccc ttagtgcctg agattgctca gatctacaaa acagatagag acaagtacaa       480
     cagaacagct cgggaatgga ctcagaagta tgccatgtga ctaaagagat tattggatcc       540
     tctgcgaata aaagctaggg gaactctgaa agagaaagtc cttttgattc ccacttgact       600
     gtttgctgtg aacccacgat gtaccggcct cgtcctccct ggtgcacggt cttcatctga       660
     tacagtactg ttgcatgttg cacgcaccaa aaatactgtg tttctgtacc aacactgtct       720
     cctagcagac gagccttctc caggcataac ctaggtgtga gattaaaagt tttccttatt       780
     gacttaaatc tggataacaa ggtgtgagtg agggtggtgg gtacaagata ctgctcagaa       840
     ggggtaaagg tccccaacct ataagacaat gagatggctt ttcagtggaa gccatttaca       900
     gctaaatgtt taaatgaatg aaaagctagg tgaagaacat gaatgttcct gtactcattt       960
     tattccaaaa gacctagagc ttaaatgaac attaaagcca accagactaa gccaacccac      1020
     ctcctgtatt ttaaagtcta attggtcaac aaaaatagat cggcactatc ggtccataaa      1080
     gtgtgcctgg ctttgttccc aaatccttta tacacggatg actcaaccta ttttctttca      1140
     cactttctct ccatattctt tggtttactt gcggtttctc agttgattca tcactaatag      1200
     ctcttatttt tattatatta actgcttaat ctatttggat gtaaaggtag acattcaact      1260
     tgatgaaaaa agcttgtgta tagagaccta attgctcctc ttggagcttg tacagtcaag      1320
     aatgatgcat ctgtgtaata aaccaattat tctagccatt at                         1362
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