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EBI DbfetchID U52368; SV 1; linear; genomic DNA; STD; PRO; 2671 BP. XX AC U52368; XX DT 26-MAR-1997 (Rel. 51, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Clostridium acetobutylicum rubredoxin oxidoreductase homolog and DE deformylase (def) genes, complete cds, and methionyl-tRNA formyltransferase DE homolog (fmt) gene, partial cds. XX KW . XX OS Clostridium acetobutylicum OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-2671 RA Belouski E., Gui L., Bennett G.N.; RT ; RL Submitted (25-MAR-1996) to the EMBL/GenBank/DDBJ databases. RL Ed Belouski, Biochemistry and Cell Biology, Rice University, 6100 S. Main, RL Houston, TX 77005-1892, USA XX CC On Mar 26, 1997 this sequence version replaced gi:1905952. XX FH Key Location/Qualifiers FH FT source 1..2671 FT /organism="Clostridium acetobutylicum" FT /strain="ATCC 824" FT /mol_type="genomic DNA" FT /db_xref="taxon:1488" FT CDS 500..1681 FT /codon_start=1 FT /transl_table=11 FT /product="rubredoxin oxidoreductase homolog" FT /note="ORFrubr; similar to primosomal protein n' in FT Haemophilus influenzae, Swiss-Prot Accession Number P44647" FT /db_xref="GOA:O05099" FT /db_xref="InterPro:IPR001650" FT /db_xref="UniProtKB/TrEMBL:O05099" FT /protein_id="AAB50346.1" FT /translation="MKSAIEDCILVLGSATPAVETYYKTLKEDYDLITLKNRADGALMP FT EVSVVDMREELRENNKSIFSRALYESILETLERKEQIILFLNRRGYSTFVSCRKCGYVF FT KCKNCDVSMTYHNNKGYLICHYCGSTQRIPSVCPKCGSKYVKYFGAGTERIEREIKRLF FT PNARTVRMDRDTTVKKDSYERYIMASRTKGYDILIGTQMIAKALDFKDVTLVGVVAADL FT TLNLPDYRAGERTFQLLCQVSGRAGRGSKKGKVVIQTYSPESYAIRFSSTNDYRSFFKE FT EIKLRHDMDYPPFNKLLLLNFSSKNEQLLIKNIQIVGDFLKNKAKEYSNIYVLGPCPSP FT ISKINEAYRWQIVLKGDITYEVACFIKKSIYELLKKLYNNIRVSLDINPLSLL" FT RBS 1687..1692 FT /gene="def" FT CDS 1700..2152 FT /codon_start=1 FT /transl_table=11 FT /gene="def" FT /product="deformylase" FT /note="polypeptide deformylase" FT /db_xref="GOA:O05100" FT /db_xref="HSSP:1LME" FT /db_xref="InterPro:IPR000181" FT /db_xref="UniProtKB/Swiss-Prot:O05100" FT /protein_id="AAB50347.1" FT /translation="MAIRSIRKYGDELLRKKSRKVEKIDKRLLTLIDDMFETMYNADGV FT GLAAPQVGILKRLVVIDVGEGPVVLINPEILETSGKAVDVEGCLSIPERQGEVERPTYV FT KAKALNEKGEEIVIEAEDLFARAICHETDHLNGVLFVDKLAESEGN" FT RBS 2155..2160 FT /gene="fmt" FT CDS 2171..>2671 FT /codon_start=1 FT /transl_table=11 FT /gene="fmt" FT /product="methionyl-tRNA formyltransferase homolog" FT /db_xref="GOA:O05101" FT /db_xref="HSSP:1FMT" FT /db_xref="InterPro:IPR015518" FT /db_xref="UniProtKB/Swiss-Prot:O05101" FT /protein_id="AAB50348.1" FT /translation="MGTPEFSVPSLEKLIENYDVRAVLTQPDKPKGRGKKLAMSEVKEV FT AVKNNIPVFQPVKLKNDIEVINKLKEIAPDFIVVVAFGQILSKEVLDIPKYACINLHAS FT LLPNYRGAAPINWAIINGETKTGNTTMIMAEGLDTGDMLLKDEVDIKRDMTAGELHDIL FT MNRG" XX SQ Sequence 2671 BP; 991 A; 329 C; 532 G; 819 T; 0 other; tgttttctac tgttgattac agctttttat tttttgttta ccttaaatcc acatataatt 60 taggaggttt tgttatggac aatttttcat tctctaaaag tattaagacg atatcacaaa 120 gtccatccgc tatagctact cttgtaggtg ttttaatatt aatagctgtt ttactaaagg 180 taaaaaaaat aaaattcact acaaaattag tagctcaagt tggagttgtt ttggcacttt 240 caactgttct aagtttattt aaaatataca aattaccaca aggaggaagt gttactttag 300 gaagcatggt tcctatacta ctaattgcct tcttttatgg tcctgaagta ggatttttaa 360 ccggctttct atttggaata atagatccgc acttttttta ccatttgata agttgggttt 420 aattgtaata gatgaagaac atgaaggcag ttacaaatca gaaagtgatc ctaagtacaa 480 tgcaatagaa gttgctgaaa tgaaaagtgc aatagaagat tgtattcttg ttttgggatc 540 ggcaactccg gctgtagaaa cctattataa aaccttaaag gaagattatg atctgataac 600 actaaaaaac agggctgatg gtgctcttat gccagaagta tcagttgttg atatgagaga 660 agaattaaga gaaaacaata aatctatatt tagcagagcc ttgtatgaaa gcattttaga 720 gacgcttgag agaaaagaac aaattatact ttttctcaat aggagaggat attcaacctt 780 tgtttcctgt agaaaatgtg gttatgtttt taagtgcaaa aattgcgatg tttcaatgac 840 ttatcacaat aataagggat atctgatatg ccactactgc ggaagcactc aaagaattcc 900 ttcagtgtgt cctaagtgcg gtagcaagta tgttaagtat tttggagcag gaacagagag 960 gatagaaaga gagataaaaa ggctttttcc aaatgcaaga actgtaagaa tggataggga 1020 tactaccgta aaaaaagatt cctatgaaag atatataatg gcttcaagaa caaagggata 1080 tgatattttg ataggtactc aaatgattgc taaggcacta gattttaagg atgttacttt 1140 agttggagta gtagctgcgg atctcacctt gaatttgcca gattacaggg caggggaaag 1200 aacttttcaa ctcctgtgtc aggttagtgg aagagcaggc agaggcagta aaaaaggtaa 1260 agtagtaatt caaacctatt caccggaaag ctatgctata agattttcat ctacaaacga 1320 ttatagaagc ttttttaaag aggaaattaa attaagacat gacatggatt atccaccttt 1380 taataaacta cttcttctaa attttagttc taaaaatgaa caattgttaa taaaaaatat 1440 acaaatagtt ggtgattttt taaaaaataa agcaaaggaa tatagtaata tttatgtatt 1500 aggtccatgc ccatcgccaa tatccaaaat caatgaagcc tatagatggc aaattgtatt 1560 aaaaggcgat ataacttatg aagtagcctg ctttataaaa aaatctattt atgaattgtt 1620 aaaaaaactt tataataata taagagtttc attagatata aacccattga gtttattata 1680 atattttgga ggtaatgtaa tggcaatacg tagtataaga aagtatgggg acgaattatt 1740 aagaaaaaaa agtagaaaag tagaaaagat agataagaga ttattaactc ttatagatga 1800 tatgtttgaa accatgtata atgcagatgg agtaggtctt gcagctccac aggttggtat 1860 attaaaaaga cttgtagtaa tagatgtagg agaaggtcct gttgtactaa taaatcctga 1920 aatattagag acaagtggaa aagctgtaga tgtagaaggc tgcctaagta ttccagaaag 1980 acaaggagaa gttgaaagac caacatatgt taaggcaaaa gctctaaatg aaaaaggaga 2040 agaaattgta attgaagcag aagatttatt tgcaagagct atatgccatg aaacagatca 2100 tttaaatgga gttttatttg tagataaatt agctgaaagt gagggaaatt aattgttgaa 2160 aattgtgttt atgggaacac cggaattttc agtaccctcc cttgagaaac ttatagaaaa 2220 ttatgatgta agggctgttt tgacgcagcc agataagcct aagggacgtg ggaaaaagct 2280 agctatgtct gaggttaaag aagtagcagt taaaaacaat attccagtgt ttcaaccagt 2340 taaattaaaa aatgatattg aagttataaa taaattaaaa gaaatagcac cagattttat 2400 agtagttgtg gcatttggtc aaattttatc aaaggaagtt cttgatatac ctaagtatgc 2460 atgtataaat ctgcatgcat ctcttttgcc aaattataga ggcgctgcac ctataaattg 2520 ggcaattata aatggagaaa caaagacagg aaatacaact atgattatgg ctgaaggatt 2580 ggatacaggt gatatgcttc ttaaggatga agttgatata aaaagagata tgacagcagg 2640 tgaacttcat gatattttga tgaatagagg a 2671 // |
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