EBI Dbfetch

ID   U49784; SV 1; linear; genomic DNA; STD; PRO; 2088 BP.
XX
AC   U49784;
XX
DT   23-MAR-1996 (Rel. 47, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Bradyrhizobium japonicum putative beta (1-6) glucans synthase (ndvC) gene,
DE   complete cds.
XX
KW   .
XX
OS   Bradyrhizobium japonicum
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Bradyrhizobium.
XX
RN   [1]
RP   1-2088
RX   PUBMED; 8755895.
RA   Bhagwat A.A., Gross K.C., Tully R.E., Keister D.L.;
RT   "Beta-glucan synthesis in Bradyrhizobium japonicum: characterization of a
RT   new locus (ndvC) influencing beta-(1-->6) linkages";
RL   J. Bacteriol. 178(15):4635-4642(1996).
XX
RN   [2]
RP   1-2088
RA   Bhagwat A.A.;
RT   ;
RL   Submitted (22-FEB-1996) to the EMBL/GenBank/DDBJ databases.
RL   Arvind A. Bhagwat, Soybean & Alfalfa Research Lab, USDA-ARS (U of Maryland
RL   at College Park), HH-19, BARC-W, Beltsville, MD 20705, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2088
FT                   /organism="Bradyrhizobium japonicum"
FT                   /strain="USDA 110"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:375"
FT   CDS             276..1946
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ndvC"
FT                   /product="putative beta (1-6) glucans synthase"
FT                   /note="Mutation in ndvC causes B. japonicum to synthesize
FT                   glucans predominantly of beta (1-3)-linkages and is
FT                   ineffective to form nodules on soybeans"
FT                   /db_xref="InterPro:IPR000490"
FT                   /db_xref="UniProtKB/TrEMBL:Q45232"
FT                   /protein_id="AAB17021.1"
FT                   /translation="MAREQVIDGASRRTEPISLRTPVALLLVSLGAIAAVWWWLATPIT
FT                   LARAPIDPADKVQCVSYAPFRGEQSPLNAWTHIEADQIEQDLRQLKEITDCVRTYSMEN
FT                   GLDQVPAIAAKVGGLKVLQGIWLSSNRAKNFEQVALAVRLTKEYPDIITSVIVGNEVLL
FT                   RGEMTTADLVSFIRAVKVQVRVPVTYADVWEFWLRNREVYEAVDLDFVTIHILPYWEDV
FT                   PVRAKFAAAHVEQIRERMAVAFPGKEILIGETGWPSEGRMREGALPSRTNQARVVSQIL
FT                   SLAKAQKFRVNLIESYDQPWKRKLEGTAGGYWGLYDSVRRNLKYPPGEPISNFPYWKWY
FT                   MGAGMGLCALVFAVAIITLRRRPWTPRFSTWLGVAISATTAGVLLGVGADKVYYESYGW
FT                   GGWLHWGALLAAGILSPIFCAQALVIGRSLPTFLDLLGPSEGRKWSKLTAVLGLTLAVT
FT                   AVIAAQTALAFVFDPRYHDFPYAALTMAVVPFAILMLNRPQIGVRPIAEAVFAGVLALS
FT                   AAYVLFNEGRDNWQSLWTCAMYLLFALTLWRARAEQSQE"
XX
SQ   Sequence 2088 BP; 361 A; 674 C; 674 G; 379 T; 0 other;
     gatatcgaat tccccaactt ctccgctgac cgcccgcgtc aggatcccgc ggacgcgtcg        60
     gtgatggcgt ccaaatgggt ctccaaatgc ggcggaaaat tcccggccag ttgcatgacc       120
     tgtatttcga attttgtccg gaaaattccc ggccagttgc atgacctgta tttcgaattt       180
     tgtccagcaa agtcacgatc ctaggcctct gtcgaacggc cgcagtaaat tccttggggg       240
     agggagggat ccgctccgaa ccaccccctt ggcagatggc gcgcgagcag gtaatcgacg       300
     gcgcttcgcg gaggacggaa ccgatttcac ttcgtacgcc agtggcgctt ctgctcgttt       360
     cactgggtgc gattgctgcc gtgtggtggt ggctggccac gccaatcacg ctcgcgcgcg       420
     ccccgatcga ccccgccgac aaggttcagt gcgtctccta cgcgccgttc cgcggcgagc       480
     aatcgccgct gaacgcatgg acccatatcg aggccgacca gatcgagcag gacctgcgcc       540
     agctcaagga gatcaccgac tgcgtccgca cctattcgat ggagaacggg ctcgaccagg       600
     ttccggcgat cgccgccaag gtcggcgggc tcaaggtgct ccagggtatc tggctctcca       660
     gcaaccgcgc caagaatttt gagcaggtcg cgctcgccgt tcgcctcacg aaggaatacc       720
     ccgacatcat cacctcggtc atcgttggca acgaggtgct gctgcgcggc gagatgacga       780
     cggccgacct cgtctccttc atccgcgcgg tgaaggtgca ggttcgcgtg cccgtcacct       840
     atgccgatgt ctgggagttc tggctgagga atcgcgaagt ctacgaggcc gtcgacctcg       900
     acttcgtgac gatccacatc ctgccctatt gggaagacgt tccggtgcgc gcgaaattcg       960
     cggctgccca tgtcgaacag atccgcgagc gcatggcggt ggcgtttccg ggcaaggaaa      1020
     tcctgatcgg cgaaaccggc tggccgagcg aagggcgcat gcgcgagggc gcgctgccgt      1080
     cgcgcaccaa ccaagcgcgc gtggtctctc aaatcctgag ccttgcgaag gcgcagaagt      1140
     tccgcgtcaa cctgatcgag tcctacgacc agccgtggaa gcgcaagctg gaaggtaccg      1200
     cgggcggcta ttggggtctc tatgactccg tgcggcggaa cctgaaatat ccgccgggcg      1260
     agccgatcag caatttcccg tactggaaat ggtacatggg cgcgggtatg ggcctttgcg      1320
     cgctggtgtt cgcggtcgct atcatcacgc tgcgccggcg gccctggacg ccgcgcttct      1380
     cgacctggct cggcgtcgcc atctcggcga ccacggcagg cgtcctgctc ggggtcggcg      1440
     ccgacaaggt atactatgag agctacggct ggggcggctg gctgcactgg ggtgcgctgc      1500
     tcgccgccgg catcctgtcg ccgatcttct gcgcgcaggc gctggtgatc ggccgcagcc      1560
     tgccgacctt ccttgacctg ctcggcccga gcgaggggcg gaaatggtca aagctcaccg      1620
     ccgtgctcgg cctcacgctg gcggtgacgg cggtgatcgc ggcacagacc gcgctcgcct      1680
     tcgtgttcga cccgcgctac cacgacttcc cctacgccgc gctgacgatg gcggtggtgc      1740
     cgttcgcgat cctgatgctg aaccggccgc agatcggcgt gcgtccgatc gcggaagcgg      1800
     tgttcgcagg cgtgctcgcg ctgtcggccg cctatgtgct cttcaacgaa ggccgcgaca      1860
     actggcagtc gctgtggacc tgcgcgatgt atctcttgtt cgcgctcacg ctgtggcggg      1920
     cgcgggccga gcaaagccaa gaatgagcag gccgatcgcg aggcccgaca gcacgacatt      1980
     gtagagcacg atgccgaggc cggcggcgac aacgccgacg gtgagcagca cgatcgacgg      2040
     ccgcatcagg ttcagcgtcg ccaccaccag cgcgacgatg ccgaacac                   2088
//