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EBI DbfetchID U48404; SV 2; linear; genomic DNA; STD; PRO; 2898 BP. XX AC U48404; XX DT 14-MAR-1996 (Rel. 47, Created) DT 07-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Azotobacter chroococcum strain MCD1 HisI (hisI), HisE (hisE), TatA (tatA), DE TatB (tatB), and tatC (tatC) genes, complete cds; and unknown genes. XX KW . XX OS Azotobacter chroococcum OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Azotobacter. XX RN [1] RP 1-2898 RA Yates M., Souza E.M.; RT "A second DNA region involved in H2-dependent respiration in Azotobacter RT chroococcum"; RL Unpublished. XX RN [2] RP 1-2898 RA Yates M.G., Souza E.M.; RT ; RL Submitted (05-FEB-1996) to the EMBL/GenBank/DDBJ databases. RL Department of Biochemistry, Universidade Federal do Parana, Centro RL Politecnico - Jardim das Americas, Curitiba, Pr 81531-990, Brazil XX RN [3] RC Sequence update by submitter RP 1-2898 RA Souza E.M.; RT ; RL Submitted (04-DEC-2006) to the EMBL/GenBank/DDBJ databases. RL Department of Biochemistry, Universidade Federal do Parana, Centro RL Politecnico - Jardim das Americas, Curitiba, Pr 81531-990, Brazil XX CC On Dec 5, 2006 this sequence version replaced gi:1224003. XX FH Key Location/Qualifiers FH FT source 1..2898 FT /organism="Azotobacter chroococcum" FT /strain="MCD1" FT /mol_type="genomic DNA" FT /db_xref="taxon:353" FT CDS <1..534 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF1" FT /db_xref="GOA:Q43924" FT /db_xref="UniProtKB/Swiss-Prot:Q43924" FT /protein_id="AAA92105.1" FT /translation="EFEAAIRTVCEPIFEKPLKDISFGQLLLRLFQTARRFNMEVQPQL FT VLLQKTLLNIEGLGRQLYPELDLWTTAKPFLERWMRKRMSPKAMLDNLQGQLEQLPHLA FT QMTRAALEGMARPAHGAPPPRDRHILRLLGAALLAGGVLLASRAPLNVADAWPGWLMLA FT SGLYLLVRRQRFPD" FT gene 566..976 FT /gene="hisI" FT RBS 566..569 FT /gene="hisI" FT CDS 575..976 FT /codon_start=1 FT /transl_table=11 FT /gene="hisI" FT /product="HisI" FT /note="ORF2; similar to the N-terminal of phosphoribosyl FT c-AMP hydrolase" FT /db_xref="GOA:Q43925" FT /db_xref="InterPro:IPR002496" FT /db_xref="UniProtKB/Swiss-Prot:Q43925" FT /protein_id="AAA92106.1" FT /translation="MKDWLDEIHWNADGLVPAIAQDHKTGRILMMAWMNRESLALTVRE FT NRAIYWSRSRGKLWRKGEESGHLQKVHEVRLDCDADVIVLQVEQLGGIACHTGRESCFY FT RVFEDGAWKVVEPILKDPDAIYHAGHRHE" FT gene 958..1301 FT /gene="hisE" FT RBS 958..961 FT /gene="hisE" FT CDS 969..1301 FT /codon_start=1 FT /transl_table=11 FT /gene="hisE" FT /product="HisE" FT /note="ORF3; similar to the C-terminal of phosphoribosyl FT c-AMP hydrolase" FT /db_xref="GOA:Q43926" FT /db_xref="InterPro:IPR008179" FT /db_xref="UniProtKB/Swiss-Prot:Q43926" FT /protein_id="AAA92107.1" FT /translation="MSDTLNQLAEVLEARKNAAPDSSYVASLYHKGLNKILEKVGEESV FT ETILAAKDAAASGDCSELIYETADLWFHSLVMLAALGQHPQAVLDELERRFGLSGHAEK FT AARPKS" FT gene 1341..1585 FT /gene="tatA" FT RBS 1341..1345 FT /gene="tatA" FT CDS 1352..1585 FT /codon_start=1 FT /transl_table=11 FT /gene="tatA" FT /product="TatA" FT /note="ORF4" FT /db_xref="GOA:A1EHP9" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/TrEMBL:A1EHP9" FT /protein_id="ABL10099.1" FT /translation="MGFGGISIWQLLIILLIVVMLFGTKRLKSLGSDLGDAIKGFRKSM FT DNEENKAPPVEEQKGQTIEAQARKVEEPARKD" FT gene 1574..1929 FT /gene="tatB" FT RBS 1574..1577 FT /gene="tatA" FT CDS 1588..1929 FT /codon_start=1 FT /transl_table=11 FT /gene="tatB" FT /product="TatB" FT /note="ORF5" FT /db_xref="GOA:A1EHQ0" FT /db_xref="InterPro:IPR003998" FT /db_xref="UniProtKB/TrEMBL:A1EHQ0" FT /protein_id="ABL10100.1" FT /translation="MFDIGFSELLLVGLVALLVLGPERLPVAARMAGLWIGRLKRSFNT FT LKTEVEREIGADEIRRQLHNERILELEREMKQSLQPPAPSAPDETAASPATPPQPASPA FT AHSDKTPSP" FT gene 1913..2693 FT /gene="tatC" FT RBS 1913..1917 FT /gene="tatB" FT CDS 1926..2693 FT /codon_start=1 FT /transl_table=11 FT /gene="tatC" FT /product="tatC" FT /note="ORF6; mutations in this gene affect the culture pH" FT /db_xref="GOA:P54085" FT /db_xref="InterPro:IPR019822" FT /db_xref="UniProtKB/Swiss-Prot:P54085" FT /protein_id="AAA92109.2" FT /translation="MTARPDSDQDMPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQDI FT YALVSAPLRAYLPEGATMIATGVASPFLAPFKLTLMISLFLAMPVVLHQVWGFIAPGLY FT QHEKRIAMPLMASSVLLFYAGMAFAYFVVFPIMFGFFASVTPEGVAMMTDIGQYLDFVL FT TLFFAFGVAFEVPVATFLLIWVGIVDVASLRNSRPYVIVGCFVVGMVLTPPDVFSQTLL FT AVPMWLLFEIGVFFGARIRHREEPAASDGPSQP" FT sig_peptide 1926..2021 FT /gene="tatC" FT mat_peptide 2022..2660 FT /gene="tatC" FT /product="TatC" FT CDS 2690..>2898 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF7" FT /db_xref="UniProtKB/TrEMBL:A1EHP8" FT /protein_id="ABL10101.1" FT /translation="MNLLLLDDADFVAADRVILRDRRLRHLQEVHRAEAGDGLRIGRLG FT GVMGEGRLLRLEAAEAELQVAFDR" XX SQ Sequence 2898 BP; 481 A; 1030 C; 918 G; 469 T; 0 other; gaattcgagg cggcgatccg caccgtctgc gagccgatct tcgagaagcc cttgaaggac 60 atctccttcg gccagctgct gctgcgcctg ttccagaccg cccggcgctt caacatggag 120 gtccagccgc agctggtgct gctgcagaag accctgctca acatcgaggg gctcggccgc 180 cagctctatc cggagctgga cctgtggacc accgccaagc ccttcctcga gcgctggatg 240 cgcaagcgca tgagcccgaa ggccatgctc gacaacctgc agggccagct cgaacagctg 300 ccgcatctgg cgcagatgac ccgcgcggcg ctggaaggca tggcccggcc ggcgcacggc 360 gccccgccgc cccgcgaccg gcacatcctg cgcctgctcg gcgccgccct gctggccggc 420 ggcgtgctgc tcgccagccg ggcgccgctg aacgtcgcgg acgcctggcc gggctggctg 480 atgctcgcca gcggcctcta tctgctggta cgccgccagc gcttccccga ctgacccggt 540 tgtcgcgacg cccgcacgtc gcaacggagt ggatatgaaa gactggctgg acgagattca 600 ctggaacgcc gatggcctgg taccggccat cgcccaggat cacaagaccg ggcgcatcct 660 gatgatggcc tggatgaacc gcgagtccct ggccctgacc gtccgggaaa atcgcgccat 720 ctactggtca cgctcgcgtg gtaagctctg gcgcaaaggc gaggaatcgg gccacctgca 780 gaaggtgcac gaagtgcgcc tggactgcga cgccgacgtg atcgtcctgc aggtcgagca 840 gctcggcggc atcgcctgcc acaccggccg cgaaagctgc ttctaccgcg ttttcgaaga 900 cggcgcctgg aaggtcgtcg agccgatcct caaggacccc gacgccatct accatgcagg 960 acaccgtcat gagtgacacc ctcaaccagc tggccgaagt gctagaggcg cgcaagaacg 1020 ccgccccgga cagctcctac gtggccagcc tgtaccacaa gggcctgaac aagatcctcg 1080 agaaggtcgg cgaggaatcg gtggaaacca tcctcgccgc caaggacgcc gccgccagcg 1140 gcgactgcag cgagctgatc tacgagaccg ccgacctctg gttccacagc ctggtcatgc 1200 tcgccgccct cggccagcat ccccaggccg tgctcgacga actggagcgg cgcttcggcc 1260 tgtccgggca tgcggaaaag gccgcacggc cgaagtcctg agcacggccg ggacacggca 1320 atttcttcac gtctttacgg agcgaaccat catgggtttt ggcggtatca gcatctggca 1380 acttctgatc atcctgctca tcgtcgtcat gctgttcggc accaagcgcc tgaagagcct 1440 tggctcggac ctgggcgatg cgatcaaggg cttccgcaag tcgatggaca acgaggagaa 1500 caaggcgccg cccgtcgaag agcagaaagg ccagaccatc gaggcccagg cccgcaaggt 1560 cgaggaaccg gccaggaaag actgagcatg ttcgacatcg gcttcagcga actcctgctg 1620 gtcggcctgg tcgccctgct ggtgctcggc cccgagcgcc tgccggtcgc cgcgcgcatg 1680 gccgggctgt ggatcggccg cctgaaacgc agcttcaaca ccctcaagac agaagtggag 1740 cgcgagatcg gcgccgacga gattcgccgc cagctgcata acgagcgaat cctcgagctg 1800 gagcgggaga tgaagcagag cctgcagccg ccggcgccga gcgcgccgga cgagaccgcg 1860 gccagccctg cgacgccccc tcagccggcc tcccctgccg cccactccga caagacgccc 1920 agcccatgac agcccgaccg gacagcgacc aggacatgcc cctggtcgcg cacctgaccg 1980 agctgcgctc gcgcctgctg cgcagcgtgg cggcagtgct gctgatcttc gccgcactct 2040 tctacttcgc ccaggacatc tacgccctgg tctcggcgcc cctgcgcgcc tacctgccgg 2100 aaggcgcgac catgatcgcc accggcgtgg cctcgccgtt cctcgcgccg ttcaagctga 2160 ccctgatgat ctcgctgttc ctcgccatgc cggtggtcct ccaccaggtc tggggcttca 2220 tcgcgccggg gctgtaccag cacgagaaac gcatcgccat gccgttgatg gcctccagcg 2280 tgctgctctt ctatgccggc atggccttcg cctacttcgt ggtcttcccg atcatgttcg 2340 gcttcttcgc cagcgtgacc ccggaaggcg tggcgatgat gaccgatatc ggccagtacc 2400 tggacttcgt gctcaccctg ttcttcgcct tcggtgtggc cttcgaggtg ccggtggcga 2460 ccttcctgct gatctgggtg ggcatcgtcg acgtggcaag cctgcgcaac agtcgcccct 2520 acgtgatcgt cggctgcttc gtggtcggca tggtcctcac cccgccagac gtgttctccc 2580 agaccctgct cgccgtgccc atgtggctgc tgttcgagat cggcgtgttc ttcggcgcgc 2640 ggatccgcca ccgcgaggag ccggccgcct ccgacggccc gtcgcaaccg tgaacctgct 2700 gctgctcgac gacgccgact tcgtcgccgc cgaccgggtg atcctgcgcg accgccgcct 2760 gcgccacctg caggaagtgc atcgcgccga ggccggcgac ggcctgcgca tcggccgtct 2820 gggcggggtc atgggcgaag gccgactgct gcgcctggag gcggcggagg ccgaactgca 2880 ggtagccttc gaccggga 2898 // |
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